RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 C21orf62-AS1Q17RA5 79 aa8.83□□□□□ -1
TSR3-202ENST00000566296 A0A1W2PNM2 257 aa8.82□□□□□ -1
TSR3-202ENST00000566296 CCKP06307 115 aa8.82□□□□□ -1
TSR3-202ENST00000566296 C14orf132Q9NPU4 83 aa8.81□□□□□ -1
TSR3-202ENST00000566296 Q6ZQT0 140 aa8.8□□□□□ -1
TSR3-202ENST00000566296 VPS25Q9BRG1 176 aa8.79□□□□□ -1
TSR3-202ENST00000566296 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
TSR3-202ENST00000566296 FLGP20930 4061 aaPredicted RBP8.78□□□□□ -1
TSR3-202ENST00000566296 A0A087WSZ3 146 aa8.77□□□□□ -1.01
TSR3-202ENST00000566296 A0A1B0GW54 56 aa8.77□□□□□ -1.01
TSR3-202ENST00000566296 ETDBQ3ZM63 59 aa8.74□□□□□ -1.01
TSR3-202ENST00000566296 ATP11AUNQ6ZP68 121 aa8.65□□□□□ -1.02
TSR3-202ENST00000566296 Q96NJ1 140 aa8.64□□□□□ -1.03
TSR3-202ENST00000566296 Q75L30 129 aa8.63□□□□□ -1.03
TSR3-202ENST00000566296 LINC00472Q9H8W2 130 aa8.62□□□□□ -1.03
TSR3-202ENST00000566296 NREPQ16612 68 aa8.6□□□□□ -1.03
TSR3-202ENST00000566296 J3KT08 172 aa8.58□□□□□ -1.04
TSR3-202ENST00000566296 IGKV4-1P06312 121 aa8.58□□□□□ -1.04
TSR3-202ENST00000566296 SIGMAR1Q99720 223 aa8.58□□□□□ -1.04
TSR3-202ENST00000566296 DEFB116Q30KQ4 102 aa8.56□□□□□ -1.04
TSR3-202ENST00000566296 ACYP1P07311 99 aa8.55□□□□□ -1.04
TSR3-202ENST00000566296 UBL5Q9BZL1 73 aa8.55□□□□□ -1.04
TSR3-202ENST00000566296 LINC00846Q9NV44 126 aa8.55□□□□□ -1.04
TSR3-202ENST00000566296 Q6ZVQ6 151 aa8.54□□□□□ -1.04
TSR3-202ENST00000566296 FAM240AA0A1B0GVK7 77 aa8.53□□□□□ -1.04
TSR3-202ENST00000566296 J3QR89 54 aa8.5□□□□□ -1.05
TSR3-202ENST00000566296 NDUFB1O75438 58 aa8.5□□□□□ -1.05
TSR3-202ENST00000566296 BPY2O14599 106 aa8.49□□□□□ -1.05
TSR3-202ENST00000566296 A8MWP4 228 aa8.48□□□□□ -1.05
TSR3-202ENST00000566296 C20orf166-AS1Q96NR2 134 aa8.48□□□□□ -1.05
TSR3-202ENST00000566296 A0A1B0GVX0 72 aa8.47□□□□□ -1.05
TSR3-202ENST00000566296 IGHV6-1A0A0B4J1U7 121 aa8.45□□□□□ -1.06
TSR3-202ENST00000566296 A8MUU9 505 aa8.45□□□□□ -1.06
TSR3-202ENST00000566296 DSCR10P59022 87 aa8.45□□□□□ -1.06
TSR3-202ENST00000566296 C8orf87E5RJ46 101 aa8.44□□□□□ -1.06
TSR3-202ENST00000566296 LINC00313P59037 77 aa8.44□□□□□ -1.06
TSR3-202ENST00000566296 IGKV3D-7A0A0C4DH55 119 aa8.43□□□□□ -1.06
TSR3-202ENST00000566296 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
TSR3-202ENST00000566296 KRTAP9-7A8MTY7 169 aa8.42□□□□□ -1.06
TSR3-202ENST00000566296 PRR15Q8IV56 129 aa8.42□□□□□ -1.06
TSR3-202ENST00000566296 KRTAP9-8Q9BYQ0 159 aa8.42□□□□□ -1.06
TSR3-202ENST00000566296 SSPOA2VEC9 5147 aa8.4□□□□□ -1.06
TSR3-202ENST00000566296 CXCL6P80162 114 aa8.4□□□□□ -1.06
TSR3-202ENST00000566296 K7EQZ3 153 aa8.39□□□□□ -1.07
TSR3-202ENST00000566296 USH2AO75445 5202 aa8.38□□□□□ -1.07
TSR3-202ENST00000566296 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
TSR3-202ENST00000566296 K7ERU9 68 aa8.38□□□□□ -1.07
TSR3-202ENST00000566296 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
TSR3-202ENST00000566296 ATP5EP2Q5VTU8 51 aa8.38□□□□□ -1.07
TSR3-202ENST00000566296 NOTCH2NLQ7Z3S9 236 aa8.37□□□□□ -1.07
TSR3-202ENST00000566296 C8orf17Q9NRJ1 99 aa8.37□□□□□ -1.07
TSR3-202ENST00000566296 LINC00643Q86TS7 51 aa8.35□□□□□ -1.07
TSR3-202ENST00000566296 Q8N9L7 120 aa8.35□□□□□ -1.07
TSR3-202ENST00000566296 KRTAP16-1A8MUX0 517 aa8.34□□□□□ -1.07
TSR3-202ENST00000566296 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
TSR3-202ENST00000566296 MT2AP02795 61 aa8.3□□□□□ -1.08
TSR3-202ENST00000566296 RBM12B-AS1Q9P1G2 102 aa8.3□□□□□ -1.08
TSR3-202ENST00000566296 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
TSR3-202ENST00000566296 hDV103S1A0JD37 113 aa8.28□□□□□ -1.08
TSR3-202ENST00000566296 MRPL34Q9BQ48 92 aaKnown RBP8.27□□□□□ -1.09
TSR3-202ENST00000566296 HCG22E2RYF7 251 aa8.26□□□□□ -1.09
TSR3-202ENST00000566296 CASC2Q6XLA1 102 aa8.26□□□□□ -1.09
TSR3-202ENST00000566296 Q8N9P0 234 aaPredicted RBP8.26□□□□□ -1.09
TSR3-202ENST00000566296 WFDC13Q8IUB5 93 aa8.24□□□□□ -1.09
TSR3-202ENST00000566296 MT1FP04733 61 aa8.23□□□□□ -1.09
TSR3-202ENST00000566296 HRES1P13985 223 aa8.23□□□□□ -1.09
TSR3-202ENST00000566296 HIST1H4AP62805 103 aaKnown RBP8.23□□□□□ -1.09
TSR3-202ENST00000566296 KRTAP10-10P60014 251 aa8.21□□□□□ -1.1
TSR3-202ENST00000566296 KRTAP19-1Q8IUB9 90 aa8.21□□□□□ -1.1
TSR3-202ENST00000566296 MPLKIPQ8TAP9 179 aa8.21□□□□□ -1.1
TSR3-202ENST00000566296 FCGBPQ9Y6R7 5405 aaPredicted RBP8.21□□□□□ -1.1
TSR3-202ENST00000566296 LCE2BO14633 110 aa8.19□□□□□ -1.1
TSR3-202ENST00000566296 NDUFS5O43920 106 aa8.18□□□□□ -1.1
TSR3-202ENST00000566296 KRTAP9-3Q9BYQ3 159 aa8.17□□□□□ -1.1
TSR3-202ENST00000566296 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.1
TSR3-202ENST00000566296 A0A087WVE0 104 aa8.14□□□□□ -1.11
TSR3-202ENST00000566296 IMUPQ9GZP8 106 aa8.13□□□□□ -1.11
TSR3-202ENST00000566296 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
TSR3-202ENST00000566296 TP53AIP1Q9HCN2 124 aa8.1□□□□□ -1.11
TSR3-202ENST00000566296 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
TSR3-202ENST00000566296 SPINK7P58062 85 aa8.03□□□□□ -1.12
TSR3-202ENST00000566296 Q5W150 140 aa8.03□□□□□ -1.12
TSR3-202ENST00000566296 SYNE2Q8WXH0 6885 aaKnown RBP8.03□□□□□ -1.12
TSR3-202ENST00000566296 UQCRQO14949 82 aa7.99□□□□□ -1.13
TSR3-202ENST00000566296 SCGB1A1P11684 91 aa7.99□□□□□ -1.13
TSR3-202ENST00000566296 KRTAP19-6Q3LI70 58 aa7.99□□□□□ -1.13
TSR3-202ENST00000566296 TRAV22A0A0B4J277 110 aa7.96□□□□□ -1.14
TSR3-202ENST00000566296 OCR1Q9BZK8 76 aa7.96□□□□□ -1.14
TSR3-202ENST00000566296 FAM236AA0A1B0GUQ0 79 aa7.95□□□□□ -1.14
TSR3-202ENST00000566296 FAM236BA0A1B0GV22 79 aa7.95□□□□□ -1.14
TSR3-202ENST00000566296 C7orf65Q6ZTY9 151 aa7.94□□□□□ -1.14
TSR3-202ENST00000566296 IGKV2D-30A0A075B6S6 120 aa7.93□□□□□ -1.14
TSR3-202ENST00000566296 IGKV2-30P06310 120 aa7.93□□□□□ -1.14
TSR3-202ENST00000566296 ATOX1O00244 68 aa7.91□□□□□ -1.14
TSR3-202ENST00000566296 H0Y9P7 68 aa7.9□□□□□ -1.14
TSR3-202ENST00000566296 SMIM20Q8N5G0 67 aa7.9□□□□□ -1.14
TSR3-202ENST00000566296 C5orf47Q569G3 176 aa7.88□□□□□ -1.15
TSR3-202ENST00000566296 LOC101927531A0A1B0GV80 90 aa7.87□□□□□ -1.15
TSR3-202ENST00000566296 MP68P56378 58 aa7.87□□□□□ -1.15
TSR3-202ENST00000566296 TRAV7A0A075B6U4 112 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms