RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 Q8N9L7 120 aa9.87□□□□□ -0.83
RAB40C-210ENST00000566290 Q96NJ1 140 aa9.86□□□□□ -0.83
RAB40C-210ENST00000566290 PRR15Q8IV56 129 aa9.85□□□□□ -0.83
RAB40C-210ENST00000566290 ANAPC11Q9NYG5 84 aa9.85□□□□□ -0.83
RAB40C-210ENST00000566290 HCG22E2RYF7 251 aa9.83□□□□□ -0.84
RAB40C-210ENST00000566290 OCR1Q9BZK8 76 aa9.82□□□□□ -0.84
RAB40C-210ENST00000566290 TNXBP22105 4242 aa9.82□□□□□ -0.84
RAB40C-210ENST00000566290 KRTAP13-2Q52LG2 175 aa9.81□□□□□ -0.84
RAB40C-210ENST00000566290 A0A087X002 238 aa9.8□□□□□ -0.84
RAB40C-210ENST00000566290 NDUFB1O75438 58 aa9.79□□□□□ -0.84
RAB40C-210ENST00000566290 KRTAP9-2Q9BYQ4 174 aa9.78□□□□□ -0.84
RAB40C-210ENST00000566290 MT1HL1P0DM35 61 aa9.76□□□□□ -0.85
RAB40C-210ENST00000566290 RPS29P62273 56 aaKnown RBP9.76□□□□□ -0.85
RAB40C-210ENST00000566290 KLKP1Q107X0 134 aa9.76□□□□□ -0.85
RAB40C-210ENST00000566290 DEFB116Q30KQ4 102 aa9.74□□□□□ -0.85
RAB40C-210ENST00000566290 LIMD2Q9BT23 127 aa9.74□□□□□ -0.85
RAB40C-210ENST00000566290 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
RAB40C-210ENST00000566290 A0A1B0GVX0 72 aa9.71□□□□□ -0.86
RAB40C-210ENST00000566290 HRCT1Q6UXD1 115 aa9.71□□□□□ -0.86
RAB40C-210ENST00000566290 CASC2Q6XLA1 102 aa9.7□□□□□ -0.86
RAB40C-210ENST00000566290 SPINK1P00995 79 aa9.69□□□□□ -0.86
RAB40C-210ENST00000566290 KRTAP9-6A0A140TA67 174 aa9.68□□□□□ -0.86
RAB40C-210ENST00000566290 NDUFC1O43677 76 aa9.68□□□□□ -0.86
RAB40C-210ENST00000566290 SPAG11AQ6PDA7 123 aa9.68□□□□□ -0.86
RAB40C-210ENST00000566290 TYMSOSQ8TAI1 123 aa9.67□□□□□ -0.86
RAB40C-210ENST00000566290 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
RAB40C-210ENST00000566290 TMEM258P61165 79 aa9.66□□□□□ -0.86
RAB40C-210ENST00000566290 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
RAB40C-210ENST00000566290 TMEM254Q8TBM7 123 aa9.66□□□□□ -0.86
RAB40C-210ENST00000566290 C8orf87E5RJ46 101 aa9.65□□□□□ -0.86
RAB40C-210ENST00000566290 C5orf47Q569G3 176 aa9.65□□□□□ -0.86
RAB40C-210ENST00000566290 hDV103S1A0JD37 113 aa9.64□□□□□ -0.87
RAB40C-210ENST00000566290 WFDC13Q8IUB5 93 aa9.64□□□□□ -0.87
RAB40C-210ENST00000566290 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
RAB40C-210ENST00000566290 H3BPC8 53 aa9.62□□□□□ -0.87
RAB40C-210ENST00000566290 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
RAB40C-210ENST00000566290 TP53AIP1Q9HCN2 124 aa9.62□□□□□ -0.87
RAB40C-210ENST00000566290 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
RAB40C-210ENST00000566290 LINC00304Q8N9R0 145 aa9.59□□□□□ -0.87
RAB40C-210ENST00000566290 CYSTM1Q9H1C7 97 aa9.59□□□□□ -0.87
RAB40C-210ENST00000566290 H7BZZ5 65 aa9.58□□□□□ -0.88
RAB40C-210ENST00000566290 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
RAB40C-210ENST00000566290 KRTAP10-8P60410 259 aa9.57□□□□□ -0.88
RAB40C-210ENST00000566290 PRR26Q8N8Z3 221 aa9.57□□□□□ -0.88
RAB40C-210ENST00000566290 IGHV6-1A0A0B4J1U7 121 aa9.56□□□□□ -0.88
RAB40C-210ENST00000566290 MRPL34Q9BQ48 92 aaKnown RBP9.56□□□□□ -0.88
RAB40C-210ENST00000566290 LPAP08519 4548 aa9.55□□□□□ -0.88
RAB40C-210ENST00000566290 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
RAB40C-210ENST00000566290 MP68P56378 58 aa9.54□□□□□ -0.88
RAB40C-210ENST00000566290 ATP5EP56381 51 aaPredicted RBP9.54□□□□□ -0.88
RAB40C-210ENST00000566290 SNURFQ9Y675 71 aa9.51□□□□□ -0.89
RAB40C-210ENST00000566290 TRAV22A0A0B4J277 110 aa9.5□□□□□ -0.89
RAB40C-210ENST00000566290 MUC2Q02817 5179 aa9.49□□□□□ -0.89
RAB40C-210ENST00000566290 H0Y9P7 68 aa9.46□□□□□ -0.9
RAB40C-210ENST00000566290 LINC00313P59037 77 aa9.46□□□□□ -0.9
RAB40C-210ENST00000566290 RPS28P62857 69 aaKnown RBP9.46□□□□□ -0.9
RAB40C-210ENST00000566290 NOTCH2NLQ7Z3S9 236 aa9.46□□□□□ -0.9
RAB40C-210ENST00000566290 Q8N9P0 234 aaPredicted RBP9.46□□□□□ -0.9
RAB40C-210ENST00000566290 FAM236DA0A1B0GTK5 79 aa9.45□□□□□ -0.9
RAB40C-210ENST00000566290 FAM236CP0DP71 79 aa9.45□□□□□ -0.9
RAB40C-210ENST00000566290 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
RAB40C-210ENST00000566290 KRTAP13-3Q3SY46 172 aa9.4□□□□□ -0.9
RAB40C-210ENST00000566290 LINC00208Q96KT6 92 aa9.38□□□□□ -0.91
RAB40C-210ENST00000566290 SPANXA2-OT1Q8N9U9 137 aa9.37□□□□□ -0.91
RAB40C-210ENST00000566290 NDUFS5O43920 106 aa9.36□□□□□ -0.91
RAB40C-210ENST00000566290 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
RAB40C-210ENST00000566290 LOC101927531A0A1B0GV80 90 aa9.35□□□□□ -0.91
RAB40C-210ENST00000566290 CYP4F30PQ9H0H9 118 aa9.33□□□□□ -0.92
RAB40C-210ENST00000566290 SERP1Q9Y6X1 66 aa9.33□□□□□ -0.92
RAB40C-210ENST00000566290 LCE2AQ5TA79 106 aaPredicted RBP9.3□□□□□ -0.92
RAB40C-210ENST00000566290 FP248Q71RG6 208 aaPredicted RBP9.28□□□□□ -0.92
RAB40C-210ENST00000566290 Q5W150 140 aa9.26□□□□□ -0.93
RAB40C-210ENST00000566290 C20orf166-AS1Q96NR2 134 aa9.24□□□□□ -0.93
RAB40C-210ENST00000566290 IGLV7-46A0A075B6I9 117 aa9.22□□□□□ -0.93
RAB40C-210ENST00000566290 A8MUU9 505 aa9.21□□□□□ -0.94
RAB40C-210ENST00000566290 IGKV2-30P06310 120 aa9.19□□□□□ -0.94
RAB40C-210ENST00000566290 FSIP2Q5CZC0 6907 aa9.19□□□□□ -0.94
RAB40C-210ENST00000566290 PRR4Q16378 134 aa9.13□□□□□ -0.95
RAB40C-210ENST00000566290 Q75L30 129 aa9.13□□□□□ -0.95
RAB40C-210ENST00000566290 SMIM26A0A096LP01 95 aa9.11□□□□□ -0.95
RAB40C-210ENST00000566290 RETNLBQ9BQ08 111 aa9.11□□□□□ -0.95
RAB40C-210ENST00000566290 CRCT1Q9UGL9 99 aa9.1□□□□□ -0.95
RAB40C-210ENST00000566290 PCOTHQ58A44 107 aa9.09□□□□□ -0.95
RAB40C-210ENST00000566290 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
RAB40C-210ENST00000566290 C9orf92A6NGG3 77 aa9.04□□□□□ -0.96
RAB40C-210ENST00000566290 DMAC1Q96GE9 116 aa9.02□□□□□ -0.97
RAB40C-210ENST00000566290 HRES1P13985 223 aa9.01□□□□□ -0.97
RAB40C-210ENST00000566290 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
RAB40C-210ENST00000566290 RPL37P61927 97 aaKnown RBP8.97□□□□□ -0.97
RAB40C-210ENST00000566290 IGKV2D-30A0A075B6S6 120 aa8.96□□□□□ -0.98
RAB40C-210ENST00000566290 TPRXLQ17RH7 258 aa8.96□□□□□ -0.98
RAB40C-210ENST00000566290 COA5Q86WW8 74 aa8.96□□□□□ -0.98
RAB40C-210ENST00000566290 A8MUN3 132 aa8.94□□□□□ -0.98
RAB40C-210ENST00000566290 ACYP2P14621 99 aa8.94□□□□□ -0.98
RAB40C-210ENST00000566290 XP32Q5T750 250 aa8.93□□□□□ -0.98
RAB40C-210ENST00000566290 MUC17Q685J3 4493 aa8.93□□□□□ -0.98
RAB40C-210ENST00000566290 Q1T7F1 81 aa8.91□□□□□ -0.98
RAB40C-210ENST00000566290 V9GYY9 64 aa8.91□□□□□ -0.98
RAB40C-210ENST00000566290 ATP11AUNQ6ZP68 121 aa8.88□□□□□ -0.99
RAB40C-210ENST00000566290 SPINK7P58062 85 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms