RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 KLKP1Q107X0 134 aa7.01□□□□□ -1.29
CLK3-217ENST00000566126 DSCR8Q96T75 97 aa7□□□□□ -1.29
CLK3-217ENST00000566126 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
CLK3-217ENST00000566126 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
CLK3-217ENST00000566126 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
CLK3-217ENST00000566126 MT1XP80297 61 aa6.96□□□□□ -1.3
CLK3-217ENST00000566126 ANKRD29Q8N6D5 301 aa6.96□□□□□ -1.3
CLK3-217ENST00000566126 FABP2P12104 132 aa6.95□□□□□ -1.3
CLK3-217ENST00000566126 KRTAP12-2P59991 146 aa6.94□□□□□ -1.3
CLK3-217ENST00000566126 HMCN1Q96RW7 5635 aa6.94□□□□□ -1.3
CLK3-217ENST00000566126 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
CLK3-217ENST00000566126 S100A1P23297 94 aa6.91□□□□□ -1.3
CLK3-217ENST00000566126 A0A1B0GV72 72 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST1H2BKO60814 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 TRACP01848 142 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST1H2BJP06899 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST1H2BOP23527 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST1H2BBP33778 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST1H2BDP58876 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST1H2BCP62807 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST2H2BEQ16778 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST1H2BHQ93079 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST1H2BNQ99877 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 HIST1H2BMQ99879 126 aa6.9□□□□□ -1.3
CLK3-217ENST00000566126 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
CLK3-217ENST00000566126 CCKP06307 115 aa6.89□□□□□ -1.31
CLK3-217ENST00000566126 SNCGO76070 127 aa6.88□□□□□ -1.31
CLK3-217ENST00000566126 COA6Q5JTJ3 125 aaKnown RBP6.87□□□□□ -1.31
CLK3-217ENST00000566126 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
CLK3-217ENST00000566126 C8orf17Q9NRJ1 99 aa6.87□□□□□ -1.31
CLK3-217ENST00000566126 IGKV2D-30A0A075B6S6 120 aa6.84□□□□□ -1.31
CLK3-217ENST00000566126 H0YGX0 51 aa6.84□□□□□ -1.31
CLK3-217ENST00000566126 IGKV2-30P06310 120 aa6.84□□□□□ -1.31
CLK3-217ENST00000566126 KRTAP5-10Q6L8G5 202 aa6.84□□□□□ -1.31
CLK3-217ENST00000566126 J3KT08 172 aa6.83□□□□□ -1.32
CLK3-217ENST00000566126 C4orf26Q17RF5 130 aa6.83□□□□□ -1.32
CLK3-217ENST00000566126 LCE1DQ5T752 114 aa6.83□□□□□ -1.32
CLK3-217ENST00000566126 ATOH7Q8N100 152 aa6.83□□□□□ -1.32
CLK3-217ENST00000566126 LCA10Q71F78 164 aa6.82□□□□□ -1.32
CLK3-217ENST00000566126 PRR15Q8IV56 129 aa6.82□□□□□ -1.32
CLK3-217ENST00000566126 Q6ZVQ6 151 aa6.81□□□□□ -1.32
CLK3-217ENST00000566126 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
CLK3-217ENST00000566126 S4R3F8 94 aa6.81□□□□□ -1.32
CLK3-217ENST00000566126 NDUFB1O75438 58 aa6.8□□□□□ -1.32
CLK3-217ENST00000566126 C2orf91Q6ZV80 131 aa6.8□□□□□ -1.32
CLK3-217ENST00000566126 KRTDAPP60985 99 aa6.78□□□□□ -1.32
CLK3-217ENST00000566126 A0A1B0GX51 115 aa6.77□□□□□ -1.33
CLK3-217ENST00000566126 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
CLK3-217ENST00000566126 C7orf65Q6ZTY9 151 aa6.77□□□□□ -1.33
CLK3-217ENST00000566126 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
CLK3-217ENST00000566126 VPS25Q9BRG1 176 aa6.75□□□□□ -1.33
CLK3-217ENST00000566126 HIST3H2BBQ8N257 126 aa6.71□□□□□ -1.34
CLK3-217ENST00000566126 Q5W150 140 aa6.7□□□□□ -1.34
CLK3-217ENST00000566126 MRPL34Q9BQ48 92 aaKnown RBP6.7□□□□□ -1.34
CLK3-217ENST00000566126 KRTAP5-7Q6L8G8 165 aa6.69□□□□□ -1.34
CLK3-217ENST00000566126 HIST1H2BLQ99880 126 aa6.69□□□□□ -1.34
CLK3-217ENST00000566126 S100A6P06703 90 aa6.67□□□□□ -1.34
CLK3-217ENST00000566126 S100A2P29034 98 aa6.67□□□□□ -1.34
CLK3-217ENST00000566126 TMEM254Q8TBM7 123 aa6.67□□□□□ -1.34
CLK3-217ENST00000566126 ORMDL1Q9P0S3 153 aa6.67□□□□□ -1.34
CLK3-217ENST00000566126 MMP24-AS1A0A0U1RRL7 71 aa6.65□□□□□ -1.34
CLK3-217ENST00000566126 SNRPEP62304 92 aaKnown RBP6.65□□□□□ -1.34
CLK3-217ENST00000566126 Q6ZQT0 140 aa6.65□□□□□ -1.34
CLK3-217ENST00000566126 HIST1H4GQ99525 98 aa6.65□□□□□ -1.34
CLK3-217ENST00000566126 NDUFS5O43920 106 aa6.63□□□□□ -1.35
CLK3-217ENST00000566126 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
CLK3-217ENST00000566126 TMEM256-PLSCR3K7ERE1 68 aa6.62□□□□□ -1.35
CLK3-217ENST00000566126 MT4P47944 62 aa6.62□□□□□ -1.35
CLK3-217ENST00000566126 H3BQ85 93 aa6.61□□□□□ -1.35
CLK3-217ENST00000566126 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
CLK3-217ENST00000566126 A0A0B4J2C4 111 aa6.58□□□□□ -1.36
CLK3-217ENST00000566126 DNAL4O96015 105 aa6.58□□□□□ -1.36
CLK3-217ENST00000566126 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
CLK3-217ENST00000566126 UBE2V1Q13404 147 aa6.57□□□□□ -1.36
CLK3-217ENST00000566126 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
CLK3-217ENST00000566126 HSBP1L1C9JCN9 74 aa6.56□□□□□ -1.36
CLK3-217ENST00000566126 C1orf64Q8NEQ6 169 aa6.56□□□□□ -1.36
CLK3-217ENST00000566126 hDV103S1A0JD37 113 aa6.55□□□□□ -1.36
CLK3-217ENST00000566126 TRIAP1O43715 76 aa6.55□□□□□ -1.36
CLK3-217ENST00000566126 K7EQZ3 153 aa6.54□□□□□ -1.36
CLK3-217ENST00000566126 A8MUN3 132 aa6.53□□□□□ -1.36
CLK3-217ENST00000566126 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
CLK3-217ENST00000566126 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
CLK3-217ENST00000566126 DLEU1O43261 78 aa6.5□□□□□ -1.37
CLK3-217ENST00000566126 COX8AP10176 69 aa6.49□□□□□ -1.37
CLK3-217ENST00000566126 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
CLK3-217ENST00000566126 PRO1854Q9UHT4 67 aa6.47□□□□□ -1.37
CLK3-217ENST00000566126 C9JAW5 83 aa6.46□□□□□ -1.38
CLK3-217ENST00000566126 VAMP8Q9BV40 100 aa6.46□□□□□ -1.38
CLK3-217ENST00000566126 SPATA45Q537H7 98 aa6.45□□□□□ -1.38
CLK3-217ENST00000566126 KRTAP5-3Q6L8H2 238 aa6.45□□□□□ -1.38
CLK3-217ENST00000566126 PYY3Q5JQD4 70 aa6.44□□□□□ -1.38
CLK3-217ENST00000566126 HIGD1BQ9P298 99 aa6.44□□□□□ -1.38
CLK3-217ENST00000566126 PAM16Q9Y3D7 125 aa6.44□□□□□ -1.38
CLK3-217ENST00000566126 PDE6GP18545 87 aa6.43□□□□□ -1.38
CLK3-217ENST00000566126 CEND1Q8N111 149 aa6.43□□□□□ -1.38
CLK3-217ENST00000566126 TMA7Q9Y2S6 64 aaKnown RBP6.43□□□□□ -1.38
CLK3-217ENST00000566126 C14orf144Q96I85 54 aa6.42□□□□□ -1.38
CLK3-217ENST00000566126 A0A087WVE0 104 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms