RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 C4orf48Q5BLP8 95 aa9.84□□□□□ -0.83
LINC00554-201ENST00000564841 Q96NJ1 140 aa9.83□□□□□ -0.84
LINC00554-201ENST00000564841 KMT2AQ03164 3969 aa9.82□□□□□ -0.84
LINC00554-201ENST00000564841 C8orf17Q9NRJ1 99 aa9.82□□□□□ -0.84
LINC00554-201ENST00000564841 Q6ZR54 194 aa9.79□□□□□ -0.84
LINC00554-201ENST00000564841 LY6G6CO95867 125 aa9.77□□□□□ -0.85
LINC00554-201ENST00000564841 ASB16-AS1Q495Z4 193 aa9.77□□□□□ -0.85
LINC00554-201ENST00000564841 SPRR1BP22528 89 aa9.76□□□□□ -0.85
LINC00554-201ENST00000564841 TP53AIP1Q9HCN2 124 aa9.76□□□□□ -0.85
LINC00554-201ENST00000564841 ANAPC11Q9NYG5 84 aa9.75□□□□□ -0.85
LINC00554-201ENST00000564841 FRAS1Q86XX4 4008 aa9.75□□□□□ -0.85
LINC00554-201ENST00000564841 Q5W150 140 aa9.75□□□□□ -0.85
LINC00554-201ENST00000564841 DYNC2H1Q8NCM8 4307 aaKnown RBP9.72□□□□□ -0.85
LINC00554-201ENST00000564841 C14orf177Q52M58 125 aa9.7□□□□□ -0.86
LINC00554-201ENST00000564841 MRPL34Q9BQ48 92 aaKnown RBP9.7□□□□□ -0.86
LINC00554-201ENST00000564841 A0A1B0GVX0 72 aa9.69□□□□□ -0.86
LINC00554-201ENST00000564841 Q6ZRN7 208 aaPredicted RBP9.69□□□□□ -0.86
LINC00554-201ENST00000564841 VPS13DQ5THJ4 4388 aa9.68□□□□□ -0.86
LINC00554-201ENST00000564841 SPINK6Q6UWN8 80 aa9.67□□□□□ -0.86
LINC00554-201ENST00000564841 H3BS24 57 aa9.67□□□□□ -0.86
LINC00554-201ENST00000564841 LINC01554Q52M75 96 aa9.67□□□□□ -0.86
LINC00554-201ENST00000564841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.67□□□□□ -0.86
LINC00554-201ENST00000564841 RETNLBQ9BQ08 111 aa9.66□□□□□ -0.86
LINC00554-201ENST00000564841 DNAH2Q9P225 4427 aa9.65□□□□□ -0.86
LINC00554-201ENST00000564841 A0A087WTM6 91 aa9.64□□□□□ -0.87
LINC00554-201ENST00000564841 CDK2AP2O75956 126 aa9.64□□□□□ -0.87
LINC00554-201ENST00000564841 ALMS1Q8TCU4 4167 aa9.63□□□□□ -0.87
LINC00554-201ENST00000564841 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
LINC00554-201ENST00000564841 RTL8CO15255 209 aa9.59□□□□□ -0.87
LINC00554-201ENST00000564841 A0A1B0GU69 56 aa9.59□□□□□ -0.87
LINC00554-201ENST00000564841 C1orf134Q5TEV5 83 aa9.59□□□□□ -0.87
LINC00554-201ENST00000564841 KRTAP13-1Q8IUC0 172 aa9.58□□□□□ -0.88
LINC00554-201ENST00000564841 ACYP2P14621 99 aa9.58□□□□□ -0.88
LINC00554-201ENST00000564841 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
LINC00554-201ENST00000564841 IGLV5-52A0A0A0MRZ9 124 aa9.55□□□□□ -0.88
LINC00554-201ENST00000564841 KRTAP13-3Q3SY46 172 aa9.55□□□□□ -0.88
LINC00554-201ENST00000564841 HECTD4Q9Y4D8 3996 aa9.54□□□□□ -0.88
LINC00554-201ENST00000564841 DNAH8Q96JB1 4490 aa9.53□□□□□ -0.88
LINC00554-201ENST00000564841 MIR22HGQ0VDD5 57 aa9.51□□□□□ -0.89
LINC00554-201ENST00000564841 SPATA8Q6RVD6 105 aa9.51□□□□□ -0.89
LINC00554-201ENST00000564841 WWC2-AS2Q96NR7 200 aa9.5□□□□□ -0.89
LINC00554-201ENST00000564841 HYDINQ4G0P3 5121 aa9.5□□□□□ -0.89
LINC00554-201ENST00000564841 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
LINC00554-201ENST00000564841 SPACA4Q8TDM5 124 aa9.5□□□□□ -0.89
LINC00554-201ENST00000564841 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
LINC00554-201ENST00000564841 DNAH17Q9UFH2 4485 aa9.48□□□□□ -0.89
LINC00554-201ENST00000564841 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
LINC00554-201ENST00000564841 DMAC1Q96GE9 116 aa9.47□□□□□ -0.89
LINC00554-201ENST00000564841 DNAH11Q96DT5 4516 aa9.45□□□□□ -0.9
LINC00554-201ENST00000564841 UQCR11O14957 56 aa9.43□□□□□ -0.9
LINC00554-201ENST00000564841 LINC00483Q53H64 154 aa9.42□□□□□ -0.9
LINC00554-201ENST00000564841 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
LINC00554-201ENST00000564841 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.9
LINC00554-201ENST00000564841 SPINK1P00995 79 aa9.35□□□□□ -0.91
LINC00554-201ENST00000564841 DNAH5Q8TE73 4624 aa9.34□□□□□ -0.92
LINC00554-201ENST00000564841 ZNF861PO60384 105 aa9.33□□□□□ -0.92
LINC00554-201ENST00000564841 IGKV2D-30A0A075B6S6 120 aa9.32□□□□□ -0.92
LINC00554-201ENST00000564841 IGKV2-30P06310 120 aa9.32□□□□□ -0.92
LINC00554-201ENST00000564841 KRTAP10-1P60331 282 aa9.3□□□□□ -0.92
LINC00554-201ENST00000564841 KRTAP21-3Q3LHN1 58 aa9.29□□□□□ -0.92
LINC00554-201ENST00000564841 ZNF706Q9Y5V0 76 aaPredicted RBP9.28□□□□□ -0.92
LINC00554-201ENST00000564841 LRP1BQ9NZR2 4599 aa9.26□□□□□ -0.93
LINC00554-201ENST00000564841 PKHD1P08F94 4074 aa9.26□□□□□ -0.93
LINC00554-201ENST00000564841 FAM229AH3BQW9 127 aa9.25□□□□□ -0.93
LINC00554-201ENST00000564841 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
LINC00554-201ENST00000564841 IGLV7-43P04211 117 aa9.23□□□□□ -0.93
LINC00554-201ENST00000564841 SACSQ9NZJ4 4579 aa9.21□□□□□ -0.93
LINC00554-201ENST00000564841 CRIPTQ9P021 101 aa9.21□□□□□ -0.94
LINC00554-201ENST00000564841 PKD1P98161 4303 aa9.2□□□□□ -0.94
LINC00554-201ENST00000564841 Q8N1X5 172 aa9.2□□□□□ -0.94
LINC00554-201ENST00000564841 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
LINC00554-201ENST00000564841 KMT2CQ8NEZ4 4911 aaKnown RBP9.14□□□□□ -0.95
LINC00554-201ENST00000564841 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
LINC00554-201ENST00000564841 H0YAA0 97 aa9.12□□□□□ -0.95
LINC00554-201ENST00000564841 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
LINC00554-201ENST00000564841 Q6ZSA8 131 aa9.11□□□□□ -0.95
LINC00554-201ENST00000564841 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
LINC00554-201ENST00000564841 KRTAP25-1Q3LHN0 102 aa9.09□□□□□ -0.95
LINC00554-201ENST00000564841 A8MUU9 505 aa9.08□□□□□ -0.96
LINC00554-201ENST00000564841 ROMO1P60602 79 aa9.08□□□□□ -0.96
LINC00554-201ENST00000564841 KRTAP13-2Q52LG2 175 aa9.08□□□□□ -0.96
LINC00554-201ENST00000564841 TYMSOSQ8TAI1 123 aa9.08□□□□□ -0.96
LINC00554-201ENST00000564841 FAT1Q14517 4588 aa9.05□□□□□ -0.96
LINC00554-201ENST00000564841 DYNC1H1Q14204 4646 aaKnown RBP9.02□□□□□ -0.96
LINC00554-201ENST00000564841 SSBP3-AS1Q7Z2R9 100 aa9.02□□□□□ -0.97
LINC00554-201ENST00000564841 DMBT1Q9UGM3 2413 aaPredicted RBP8.99□□□□□ -0.97
LINC00554-201ENST00000564841 P0C880 135 aa8.95□□□□□ -0.98
LINC00554-201ENST00000564841 RYR2Q92736 4967 aa8.94□□□□□ -0.98
LINC00554-201ENST00000564841 A0A1B0GU33 70 aa8.92□□□□□ -0.98
LINC00554-201ENST00000564841 KRTAP1-4P0C5Y4 121 aa8.91□□□□□ -0.98
LINC00554-201ENST00000564841 A0A1B0GVY2 172 aa8.85□□□□□ -0.99
LINC00554-201ENST00000564841 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
LINC00554-201ENST00000564841 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
LINC00554-201ENST00000564841 RYR3Q15413 4870 aa8.83□□□□□ -1
LINC00554-201ENST00000564841 C9orf92A6NGG3 77 aa8.83□□□□□ -1
LINC00554-201ENST00000564841 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
LINC00554-201ENST00000564841 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
LINC00554-201ENST00000564841 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
LINC00554-201ENST00000564841 C10orf95Q9H7T3 257 aa8.68□□□□□ -1.02
LINC00554-201ENST00000564841 SPINT4Q6UDR6 99 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms