RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 KANTRA0A1W2PQU2 76 aa-0.24□□□□□ -2.45
SCAPER-213ENST00000564757 NDUFB1O75438 58 aa-0.24□□□□□ -2.45
SCAPER-213ENST00000564757 COX6B2Q6YFQ2 88 aa-0.24□□□□□ -2.45
SCAPER-213ENST00000564757 ACACAQ13085 2346 aa-0.25□□□□□ -2.45
SCAPER-213ENST00000564757 NDUFA3O95167 84 aa-0.25□□□□□ -2.45
SCAPER-213ENST00000564757 GNG2P59768 71 aa-0.25□□□□□ -2.45
SCAPER-213ENST00000564757 SMARCA2P51531 1590 aa-0.25□□□□□ -2.45
SCAPER-213ENST00000564757 PPLO60437 1756 aa-0.26□□□□□ -2.45
SCAPER-213ENST00000564757 KIF14Q15058 1648 aa-0.26□□□□□ -2.45
SCAPER-213ENST00000564757 LTN1O94822 1766 aa-0.27□□□□□ -2.45
SCAPER-213ENST00000564757 UACAQ9BZF9 1416 aa-0.28□□□□□ -2.45
SCAPER-213ENST00000564757 TIAM2Q8IVF5 1701 aa-0.28□□□□□ -2.45
SCAPER-213ENST00000564757 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.29□□□□□ -2.46
SCAPER-213ENST00000564757 KRTAP19-7Q3SYF9 63 aa-0.29□□□□□ -2.46
SCAPER-213ENST00000564757 MAP3K4Q9Y6R4 1608 aa-0.29□□□□□ -2.46
SCAPER-213ENST00000564757 POLR1AO95602 1720 aaPredicted RBP-0.3□□□□□ -2.46
SCAPER-213ENST00000564757 TMEM131LA2VDJ0 1609 aa-0.31□□□□□ -2.46
SCAPER-213ENST00000564757 CICQ96RK0 1608 aaPredicted RBP-0.31□□□□□ -2.46
SCAPER-213ENST00000564757 URB2Q14146 1524 aaKnown RBP-0.31□□□□□ -2.46
SCAPER-213ENST00000564757 C4AP0C0L4 1744 aa-0.31□□□□□ -2.46
SCAPER-213ENST00000564757 C4BP0C0L5 1744 aa-0.31□□□□□ -2.46
SCAPER-213ENST00000564757 IFI27P40305 119 aaPredicted RBP-0.32□□□□□ -2.46
SCAPER-213ENST00000564757 ADIRFQ15847 76 aa-0.32□□□□□ -2.46
SCAPER-213ENST00000564757 KRTAP19-8Q3LI54 63 aa-0.32□□□□□ -2.46
SCAPER-213ENST00000564757 TDRG1Q3Y452 100 aa-0.32□□□□□ -2.46
SCAPER-213ENST00000564757 PRO3102Q9H379 93 aa-0.32□□□□□ -2.46
SCAPER-213ENST00000564757 NCOA2Q15596 1464 aa-0.33□□□□□ -2.46
SCAPER-213ENST00000564757 UMAD1C9J7I0 102 aa-0.33□□□□□ -2.46
SCAPER-213ENST00000564757 C3orf79P0CE67 100 aa-0.34□□□□□ -2.46
SCAPER-213ENST00000564757 S100A13Q99584 98 aa-0.34□□□□□ -2.46
SCAPER-213ENST00000564757 USP32Q8NFA0 1604 aa-0.35□□□□□ -2.46
SCAPER-213ENST00000564757 DOT1LQ8TEK3 1739 aa-0.35□□□□□ -2.47
SCAPER-213ENST00000564757 NWD1Q149M9 1564 aa-0.35□□□□□ -2.47
SCAPER-213ENST00000564757 A0A087WXM4 84 aa-0.35□□□□□ -2.47
SCAPER-213ENST00000564757 PTPN23Q9H3S7 1636 aa-0.35□□□□□ -2.47
SCAPER-213ENST00000564757 ADAMTS12P58397 1594 aa-0.36□□□□□ -2.47
SCAPER-213ENST00000564757 LINC00158P58513 81 aa-0.36□□□□□ -2.47
SCAPER-213ENST00000564757 KRTAP6-2Q3LI66 62 aa-0.36□□□□□ -2.47
SCAPER-213ENST00000564757 ST20Q9HBF5 79 aa-0.36□□□□□ -2.47
SCAPER-213ENST00000564757 NESP48681 1621 aa-0.36□□□□□ -2.47
SCAPER-213ENST00000564757 PIK3C2BO00750 1634 aa-0.37□□□□□ -2.47
SCAPER-213ENST00000564757 LCE6AA0A183 80 aa-0.37□□□□□ -2.47
SCAPER-213ENST00000564757 SMR3BP02814 79 aaPredicted RBP-0.37□□□□□ -2.47
SCAPER-213ENST00000564757 ATP5EP2Q5VTU8 51 aa-0.37□□□□□ -2.47
SCAPER-213ENST00000564757 ASXL1Q8IXJ9 1541 aa-0.38□□□□□ -2.47
SCAPER-213ENST00000564757 MT1BP07438 61 aa-0.38□□□□□ -2.47
SCAPER-213ENST00000564757 MT1HP80294 61 aa-0.38□□□□□ -2.47
SCAPER-213ENST00000564757 ZNF831Q5JPB2 1677 aa-0.39□□□□□ -2.47
SCAPER-213ENST00000564757 RB1CC1Q8TDY2 1594 aa-0.39□□□□□ -2.47
SCAPER-213ENST00000564757 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.39□□□□□ -2.47
SCAPER-213ENST00000564757 IFI6P09912 130 aa-0.39□□□□□ -2.47
SCAPER-213ENST00000564757 KRTAP8-1Q8IUC2 63 aa-0.39□□□□□ -2.47
SCAPER-213ENST00000564757 ARFGEF2Q9Y6D5 1785 aa-0.4□□□□□ -2.47
SCAPER-213ENST00000564757 TJP1Q07157 1748 aa-0.4□□□□□ -2.47
SCAPER-213ENST00000564757 DEFA5Q01523 94 aa-0.4□□□□□ -2.47
SCAPER-213ENST00000564757 MAGI3Q5TCQ9 1506 aa-0.41□□□□□ -2.48
SCAPER-213ENST00000564757 NDUFA4O00483 81 aa-0.41□□□□□ -2.48
SCAPER-213ENST00000564757 CCDC18Q5T9S5 1454 aa-0.41□□□□□ -2.48
SCAPER-213ENST00000564757 H3BUT2 72 aa-0.42□□□□□ -2.48
SCAPER-213ENST00000564757 NREPQ16612 68 aa-0.42□□□□□ -2.48
SCAPER-213ENST00000564757 KRTAP19-2Q3LHN2 52 aa-0.42□□□□□ -2.48
SCAPER-213ENST00000564757 KIAA0586Q9BVV6 1533 aa-0.43□□□□□ -2.48
SCAPER-213ENST00000564757 SMIM13P0DJ93 91 aa-0.43□□□□□ -2.48
SCAPER-213ENST00000564757 MT1FP04733 61 aa-0.44□□□□□ -2.48
SCAPER-213ENST00000564757 CCDC88BA6NC98 1476 aa-0.44□□□□□ -2.48
SCAPER-213ENST00000564757 DDX60LQ5H9U9 1706 aaKnown RBP-0.44□□□□□ -2.48
SCAPER-213ENST00000564757 SCN11AQ9UI33 1791 aa-0.45□□□□□ -2.48
SCAPER-213ENST00000564757 H3BNG1 76 aa-0.45□□□□□ -2.48
SCAPER-213ENST00000564757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.45□□□□□ -2.48
SCAPER-213ENST00000564757 DIP2BQ9P265 1576 aa-0.45□□□□□ -2.48
SCAPER-213ENST00000564757 MT2AP02795 61 aa-0.46□□□□□ -2.48
SCAPER-213ENST00000564757 MT1HL1P0DM35 61 aa-0.46□□□□□ -2.48
SCAPER-213ENST00000564757 DEFB121Q5J5C9 76 aa-0.46□□□□□ -2.48
SCAPER-213ENST00000564757 PLXNC1O60486 1568 aa-0.46□□□□□ -2.48
SCAPER-213ENST00000564757 DCAF1Q9Y4B6 1507 aa-0.47□□□□□ -2.48
SCAPER-213ENST00000564757 MT1MQ8N339 61 aa-0.47□□□□□ -2.48
SCAPER-213ENST00000564757 PLCH1Q4KWH8 1693 aa-0.47□□□□□ -2.48
SCAPER-213ENST00000564757 CFAP43Q8NDM7 1665 aa-0.48□□□□□ -2.49
SCAPER-213ENST00000564757 HMGA1P17096 107 aaKnown RBP-0.48□□□□□ -2.49
SCAPER-213ENST00000564757 DEPDC5O75140 1603 aa-0.49□□□□□ -2.49
SCAPER-213ENST00000564757 BVES-AS1Q5T3Y7 98 aa-0.49□□□□□ -2.49
SCAPER-213ENST00000564757 ERVK-7P63135 1459 aa-0.49□□□□□ -2.49
SCAPER-213ENST00000564757 ABCC1P33527 1531 aa-0.49□□□□□ -2.49
SCAPER-213ENST00000564757 H0YAA0 97 aa-0.5□□□□□ -2.49
SCAPER-213ENST00000564757 EFCAB6Q5THR3 1501 aa-0.5□□□□□ -2.49
SCAPER-213ENST00000564757 C9orf92A6NGG3 77 aa-0.51□□□□□ -2.49
SCAPER-213ENST00000564757 MRPL33O75394 65 aaKnown RBP-0.51□□□□□ -2.49
SCAPER-213ENST00000564757 WIZO95785 1651 aa-0.51□□□□□ -2.49
SCAPER-213ENST00000564757 MT1AP04731 61 aa-0.51□□□□□ -2.49
SCAPER-213ENST00000564757 MT1EP04732 61 aa-0.51□□□□□ -2.49
SCAPER-213ENST00000564757 RICTORQ6R327 1708 aa-0.51□□□□□ -2.49
SCAPER-213ENST00000564757 KDM5DQ9BY66 1539 aa-0.51□□□□□ -2.49
SCAPER-213ENST00000564757 ANKRD50Q9ULJ7 1429 aa-0.51□□□□□ -2.49
SCAPER-213ENST00000564757 CLASP1Q7Z460 1538 aa-0.52□□□□□ -2.49
SCAPER-213ENST00000564757 IAPPP10997 89 aa-0.52□□□□□ -2.49
SCAPER-213ENST00000564757 MT1GP13640 62 aa-0.52□□□□□ -2.49
SCAPER-213ENST00000564757 LYNX1G3V0Z9 82 aa-0.54□□□□□ -2.5
SCAPER-213ENST00000564757 ZC3H13Q5T200 1668 aaKnown RBP-0.55□□□□□ -2.5
SCAPER-213ENST00000564757 DEFB131BA0A096LNP1 70 aa-0.55□□□□□ -2.5
SCAPER-213ENST00000564757 DEFB130BP0DP73 79 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms