RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 LINC00304Q8N9R0 145 aa7.5□□□□□ -1.21
SPG7-209ENST00000564047 BPY2O14599 106 aa7.49□□□□□ -1.21
SPG7-209ENST00000564047 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
SPG7-209ENST00000564047 TRAV7A0A075B6U4 112 aa7.48□□□□□ -1.21
SPG7-209ENST00000564047 IGKV4-1P06312 121 aa7.47□□□□□ -1.21
SPG7-209ENST00000564047 SPINK1P00995 79 aa7.46□□□□□ -1.22
SPG7-209ENST00000564047 HRCT1Q6UXD1 115 aa7.46□□□□□ -1.22
SPG7-209ENST00000564047 SS18L2Q9UHA2 77 aa7.46□□□□□ -1.22
SPG7-209ENST00000564047 RPS29P62273 56 aaKnown RBP7.44□□□□□ -1.22
SPG7-209ENST00000564047 Q5XG85 94 aa7.42□□□□□ -1.22
SPG7-209ENST00000564047 A0A087WSZ3 146 aa7.41□□□□□ -1.22
SPG7-209ENST00000564047 LIMD2Q9BT23 127 aa7.41□□□□□ -1.22
SPG7-209ENST00000564047 TMEM258P61165 79 aa7.4□□□□□ -1.22
SPG7-209ENST00000564047 DSCR10P59022 87 aa7.38□□□□□ -1.23
SPG7-209ENST00000564047 Q8N9L7 120 aa7.38□□□□□ -1.23
SPG7-209ENST00000564047 KLKP1Q107X0 134 aa7.37□□□□□ -1.23
SPG7-209ENST00000564047 ASB16-AS1Q495Z4 193 aa7.37□□□□□ -1.23
SPG7-209ENST00000564047 C20orf197Q8N268 126 aa7.35□□□□□ -1.23
SPG7-209ENST00000564047 OCR1Q9BZK8 76 aa7.34□□□□□ -1.23
SPG7-209ENST00000564047 CYSTM1Q9H1C7 97 aa7.34□□□□□ -1.23
SPG7-209ENST00000564047 K7EQZ3 153 aa7.32□□□□□ -1.24
SPG7-209ENST00000564047 NDUFC1O43677 76 aa7.32□□□□□ -1.24
SPG7-209ENST00000564047 KRTAP9-2Q9BYQ4 174 aa7.32□□□□□ -1.24
SPG7-209ENST00000564047 C1orf195Q5TG92 126 aa7.31□□□□□ -1.24
SPG7-209ENST00000564047 LINC00472Q9H8W2 130 aa7.31□□□□□ -1.24
SPG7-209ENST00000564047 HCG22E2RYF7 251 aa7.3□□□□□ -1.24
SPG7-209ENST00000564047 J3KT08 172 aa7.3□□□□□ -1.24
SPG7-209ENST00000564047 RPS28P62857 69 aaKnown RBP7.3□□□□□ -1.24
SPG7-209ENST00000564047 Q96NJ1 140 aa7.3□□□□□ -1.24
SPG7-209ENST00000564047 H7BZZ5 65 aa7.28□□□□□ -1.24
SPG7-209ENST00000564047 TMEM254Q8TBM7 123 aa7.28□□□□□ -1.24
SPG7-209ENST00000564047 RETNLBQ9BQ08 111 aa7.27□□□□□ -1.25
SPG7-209ENST00000564047 LPAP08519 4548 aa7.26□□□□□ -1.25
SPG7-209ENST00000564047 A0A0U1RQV1 116 aa7.26□□□□□ -1.25
SPG7-209ENST00000564047 A8MWP4 228 aa7.26□□□□□ -1.25
SPG7-209ENST00000564047 FP248Q71RG6 208 aaPredicted RBP7.26□□□□□ -1.25
SPG7-209ENST00000564047 MUC2Q02817 5179 aa7.25□□□□□ -1.25
SPG7-209ENST00000564047 FAM236DA0A1B0GTK5 79 aa7.25□□□□□ -1.25
SPG7-209ENST00000564047 FAM236CP0DP71 79 aa7.25□□□□□ -1.25
SPG7-209ENST00000564047 ATP5EP56381 51 aaPredicted RBP7.25□□□□□ -1.25
SPG7-209ENST00000564047 DEFB116Q30KQ4 102 aa7.25□□□□□ -1.25
SPG7-209ENST00000564047 PRR15Q8IV56 129 aa7.25□□□□□ -1.25
SPG7-209ENST00000564047 KRTAP9-6A0A140TA67 174 aa7.24□□□□□ -1.25
SPG7-209ENST00000564047 SNURFQ9Y675 71 aa7.24□□□□□ -1.25
SPG7-209ENST00000564047 C5orf47Q569G3 176 aa7.21□□□□□ -1.26
SPG7-209ENST00000564047 FAT4Q6V0I7 4981 aa7.2□□□□□ -1.26
SPG7-209ENST00000564047 NDUFB1O75438 58 aa7.2□□□□□ -1.26
SPG7-209ENST00000564047 PRR4Q16378 134 aa7.2□□□□□ -1.26
SPG7-209ENST00000564047 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
SPG7-209ENST00000564047 CASC2Q6XLA1 102 aa7.19□□□□□ -1.26
SPG7-209ENST00000564047 WFDC13Q8IUB5 93 aa7.18□□□□□ -1.26
SPG7-209ENST00000564047 ZCCHC13Q8WW36 166 aaKnown RBP7.17□□□□□ -1.26
SPG7-209ENST00000564047 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
SPG7-209ENST00000564047 MMP24-AS1A0A0U1RRL7 71 aa7.16□□□□□ -1.26
SPG7-209ENST00000564047 A0A1B0GVX0 72 aa7.16□□□□□ -1.26
SPG7-209ENST00000564047 H3BPC8 53 aa7.16□□□□□ -1.26
SPG7-209ENST00000564047 IGHV6-1A0A0B4J1U7 121 aa7.13□□□□□ -1.27
SPG7-209ENST00000564047 C8orf87E5RJ46 101 aa7.13□□□□□ -1.27
SPG7-209ENST00000564047 MP68P56378 58 aa7.13□□□□□ -1.27
SPG7-209ENST00000564047 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
SPG7-209ENST00000564047 hDV103S1A0JD37 113 aa7.11□□□□□ -1.27
SPG7-209ENST00000564047 LINC00313P59037 77 aa7.11□□□□□ -1.27
SPG7-209ENST00000564047 KRTAP13-3Q3SY46 172 aa7.11□□□□□ -1.27
SPG7-209ENST00000564047 C8orf17Q9NRJ1 99 aa7.11□□□□□ -1.27
SPG7-209ENST00000564047 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
SPG7-209ENST00000564047 C9orf92A6NGG3 77 aa7.09□□□□□ -1.27
SPG7-209ENST00000564047 NOTCH2NLQ7Z3S9 236 aa7.08□□□□□ -1.28
SPG7-209ENST00000564047 H0Y9P7 68 aa7.07□□□□□ -1.28
SPG7-209ENST00000564047 TRAV22A0A0B4J277 110 aa7.05□□□□□ -1.28
SPG7-209ENST00000564047 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
SPG7-209ENST00000564047 MRPL34Q9BQ48 92 aaKnown RBP7.04□□□□□ -1.28
SPG7-209ENST00000564047 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
SPG7-209ENST00000564047 LINC00208Q96KT6 92 aa7.03□□□□□ -1.28
SPG7-209ENST00000564047 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
SPG7-209ENST00000564047 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
SPG7-209ENST00000564047 XP32Q5T750 250 aa7.01□□□□□ -1.29
SPG7-209ENST00000564047 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
SPG7-209ENST00000564047 Q8N9P0 234 aaPredicted RBP6.99□□□□□ -1.29
SPG7-209ENST00000564047 C1orf64Q8NEQ6 169 aa6.99□□□□□ -1.29
SPG7-209ENST00000564047 C20orf166-AS1Q96NR2 134 aa6.99□□□□□ -1.29
SPG7-209ENST00000564047 A8MUU9 505 aa6.98□□□□□ -1.29
SPG7-209ENST00000564047 Q75L30 129 aa6.97□□□□□ -1.29
SPG7-209ENST00000564047 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
SPG7-209ENST00000564047 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
SPG7-209ENST00000564047 NDUFS5O43920 106 aa6.94□□□□□ -1.3
SPG7-209ENST00000564047 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
SPG7-209ENST00000564047 LCE2BO14633 110 aa6.91□□□□□ -1.3
SPG7-209ENST00000564047 ATP11AUNQ6ZP68 121 aa6.89□□□□□ -1.31
SPG7-209ENST00000564047 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
SPG7-209ENST00000564047 C4orf26Q17RF5 130 aa6.86□□□□□ -1.31
SPG7-209ENST00000564047 PCOTHQ58A44 107 aa6.84□□□□□ -1.31
SPG7-209ENST00000564047 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
SPG7-209ENST00000564047 MUC17Q685J3 4493 aa6.83□□□□□ -1.32
SPG7-209ENST00000564047 Q1T7F1 81 aa6.82□□□□□ -1.32
SPG7-209ENST00000564047 Q5W150 140 aa6.82□□□□□ -1.32
SPG7-209ENST00000564047 SVIPQ8NHG7 77 aa6.81□□□□□ -1.32
SPG7-209ENST00000564047 V9GYY9 64 aa6.79□□□□□ -1.32
SPG7-209ENST00000564047 IGKV2-30P06310 120 aa6.76□□□□□ -1.33
SPG7-209ENST00000564047 COA5Q86WW8 74 aa6.76□□□□□ -1.33
SPG7-209ENST00000564047 MPLKIPQ8TAP9 179 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms