RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 PMAIP1Q13794 54 aa4.87□□□□□ -1.63
SMG1-209ENST00000563836 ATP5EP2Q5VTU8 51 aa4.87□□□□□ -1.63
SMG1-209ENST00000563836 LINC00643Q86TS7 51 aa4.87□□□□□ -1.63
SMG1-209ENST00000563836 FAT2Q9NYQ8 4349 aa4.87□□□□□ -1.63
SMG1-209ENST00000563836 Q6Q795 121 aa4.86□□□□□ -1.63
SMG1-209ENST00000563836 LIMD2Q9BT23 127 aa4.86□□□□□ -1.63
SMG1-209ENST00000563836 ANAPC11Q9NYG5 84 aa4.86□□□□□ -1.63
SMG1-209ENST00000563836 A0A087WSZ3 146 aa4.85□□□□□ -1.63
SMG1-209ENST00000563836 HRCT1Q6UXD1 115 aa4.85□□□□□ -1.63
SMG1-209ENST00000563836 DNAH5Q8TE73 4624 aa4.85□□□□□ -1.63
SMG1-209ENST00000563836 TRBV7-7A0A0K0K1E9 115 aa4.84□□□□□ -1.63
SMG1-209ENST00000563836 A0A1W2PNM2 257 aa4.84□□□□□ -1.63
SMG1-209ENST00000563836 BPY2O14599 106 aa4.84□□□□□ -1.63
SMG1-209ENST00000563836 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
SMG1-209ENST00000563836 SPAG11AQ6PDA7 123 aa4.84□□□□□ -1.63
SMG1-209ENST00000563836 LINC00846Q9NV44 126 aa4.84□□□□□ -1.63
SMG1-209ENST00000563836 DNAH11Q96DT5 4516 aa4.84□□□□□ -1.63
SMG1-209ENST00000563836 RYR2Q92736 4967 aa4.84□□□□□ -1.64
SMG1-209ENST00000563836 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
SMG1-209ENST00000563836 Q6ZVQ6 151 aa4.83□□□□□ -1.64
SMG1-209ENST00000563836 DNAH8Q96JB1 4490 aa4.83□□□□□ -1.64
SMG1-209ENST00000563836 NDUFB1O75438 58 aa4.82□□□□□ -1.64
SMG1-209ENST00000563836 KMT2CQ8NEZ4 4911 aaKnown RBP4.82□□□□□ -1.64
SMG1-209ENST00000563836 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
SMG1-209ENST00000563836 SPINK1P00995 79 aa4.81□□□□□ -1.64
SMG1-209ENST00000563836 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
SMG1-209ENST00000563836 HIST1H4AP62805 103 aaKnown RBP4.81□□□□□ -1.64
SMG1-209ENST00000563836 CXCL6P80162 114 aa4.81□□□□□ -1.64
SMG1-209ENST00000563836 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
SMG1-209ENST00000563836 FAM236DA0A1B0GTK5 79 aa4.8□□□□□ -1.64
SMG1-209ENST00000563836 KRTAP1-4P0C5Y4 121 aa4.8□□□□□ -1.64
SMG1-209ENST00000563836 FAM236CP0DP71 79 aa4.8□□□□□ -1.64
SMG1-209ENST00000563836 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
SMG1-209ENST00000563836 IMUPQ9GZP8 106 aa4.8□□□□□ -1.64
SMG1-209ENST00000563836 A0A0G2JQZ4 141 aa4.79□□□□□ -1.64
SMG1-209ENST00000563836 IGKV3D-7A0A0C4DH55 119 aa4.78□□□□□ -1.64
SMG1-209ENST00000563836 KRTAP13-2Q52LG2 175 aa4.78□□□□□ -1.64
SMG1-209ENST00000563836 IGLV7-46A0A075B6I9 117 aa4.77□□□□□ -1.65
SMG1-209ENST00000563836 KRTAP10-4P60372 401 aaPredicted RBP4.77□□□□□ -1.65
SMG1-209ENST00000563836 RPS29P62273 56 aaKnown RBP4.77□□□□□ -1.65
SMG1-209ENST00000563836 LRP1BQ9NZR2 4599 aa4.76□□□□□ -1.65
SMG1-209ENST00000563836 MT-ATP8P03928 68 aa4.76□□□□□ -1.65
SMG1-209ENST00000563836 IGKV4-1P06312 121 aa4.76□□□□□ -1.65
SMG1-209ENST00000563836 Q5XG85 94 aa4.75□□□□□ -1.65
SMG1-209ENST00000563836 ASB16-AS1Q495Z4 193 aa4.74□□□□□ -1.65
SMG1-209ENST00000563836 DYNC1H1Q14204 4646 aaKnown RBP4.73□□□□□ -1.65
SMG1-209ENST00000563836 A8MWP4 228 aa4.72□□□□□ -1.65
SMG1-209ENST00000563836 DEFB116Q30KQ4 102 aa4.72□□□□□ -1.65
SMG1-209ENST00000563836 LINC00472Q9H8W2 130 aa4.72□□□□□ -1.65
SMG1-209ENST00000563836 PKHD1P08F94 4074 aa4.72□□□□□ -1.65
SMG1-209ENST00000563836 RYR3Q15413 4870 aa4.7□□□□□ -1.66
SMG1-209ENST00000563836 FAM236AA0A1B0GUQ0 79 aa4.69□□□□□ -1.66
SMG1-209ENST00000563836 FAM236BA0A1B0GV22 79 aa4.69□□□□□ -1.66
SMG1-209ENST00000563836 C8orf87E5RJ46 101 aa4.69□□□□□ -1.66
SMG1-209ENST00000563836 ATOX1O00244 68 aa4.69□□□□□ -1.66
SMG1-209ENST00000563836 TMEM258P61165 79 aa4.69□□□□□ -1.66
SMG1-209ENST00000563836 PRR15Q8IV56 129 aa4.69□□□□□ -1.66
SMG1-209ENST00000563836 IGHV6-1A0A0B4J1U7 121 aa4.68□□□□□ -1.66
SMG1-209ENST00000563836 A0A1B0GVX0 72 aa4.68□□□□□ -1.66
SMG1-209ENST00000563836 HCG22E2RYF7 251 aa4.68□□□□□ -1.66
SMG1-209ENST00000563836 K7EQZ3 153 aa4.68□□□□□ -1.66
SMG1-209ENST00000563836 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
SMG1-209ENST00000563836 SRRM2Q9UQ35 2752 aaKnown RBP4.68□□□□□ -1.66
SMG1-209ENST00000563836 DSCR10P59022 87 aa4.67□□□□□ -1.66
SMG1-209ENST00000563836 KRTAP10-8P60410 259 aa4.67□□□□□ -1.66
SMG1-209ENST00000563836 VPS13BQ7Z7G8 4022 aa4.67□□□□□ -1.66
SMG1-209ENST00000563836 A0A087WVE0 104 aa4.66□□□□□ -1.66
SMG1-209ENST00000563836 LINC00313P59037 77 aa4.66□□□□□ -1.66
SMG1-209ENST00000563836 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
SMG1-209ENST00000563836 Q8N9L7 120 aa4.66□□□□□ -1.66
SMG1-209ENST00000563836 hDV103S1A0JD37 113 aa4.65□□□□□ -1.67
SMG1-209ENST00000563836 CCDC179H3BU77 68 aa4.65□□□□□ -1.67
SMG1-209ENST00000563836 UQCRQO14949 82 aa4.65□□□□□ -1.67
SMG1-209ENST00000563836 WFDC13Q8IUB5 93 aa4.65□□□□□ -1.67
SMG1-209ENST00000563836 Q96NJ1 140 aa4.65□□□□□ -1.67
SMG1-209ENST00000563836 NDUFS5O43920 106 aa4.64□□□□□ -1.67
SMG1-209ENST00000563836 FP248Q71RG6 208 aaPredicted RBP4.64□□□□□ -1.67
SMG1-209ENST00000563836 C8orf17Q9NRJ1 99 aa4.64□□□□□ -1.67
SMG1-209ENST00000563836 TMEM254Q8TBM7 123 aa4.62□□□□□ -1.67
SMG1-209ENST00000563836 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
SMG1-209ENST00000563836 MRPL34Q9BQ48 92 aaKnown RBP4.61□□□□□ -1.67
SMG1-209ENST00000563836 TP53AIP1Q9HCN2 124 aa4.61□□□□□ -1.67
SMG1-209ENST00000563836 RBM12B-AS1Q9P1G2 102 aa4.61□□□□□ -1.67
SMG1-209ENST00000563836 MMP24-AS1A0A0U1RRL7 71 aa4.6□□□□□ -1.67
SMG1-209ENST00000563836 MP68P56378 58 aa4.59□□□□□ -1.67
SMG1-209ENST00000563836 PRR4Q16378 134 aa4.59□□□□□ -1.67
SMG1-209ENST00000563836 RETNLBQ9BQ08 111 aa4.59□□□□□ -1.67
SMG1-209ENST00000563836 FAT1Q14517 4588 aa4.58□□□□□ -1.68
SMG1-209ENST00000563836 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
SMG1-209ENST00000563836 SMIM26A0A096LP01 95 aa4.58□□□□□ -1.68
SMG1-209ENST00000563836 PSPHP1O15172 72 aa4.58□□□□□ -1.68
SMG1-209ENST00000563836 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
SMG1-209ENST00000563836 SERP2Q8N6R1 65 aa4.58□□□□□ -1.68
SMG1-209ENST00000563836 HSPG2P98160 4391 aa4.58□□□□□ -1.68
SMG1-209ENST00000563836 RYR1P21817 5038 aa4.57□□□□□ -1.68
SMG1-209ENST00000563836 EPPK1P58107 5090 aaKnown RBP4.56□□□□□ -1.68
SMG1-209ENST00000563836 MT1HL1P0DM35 61 aa4.56□□□□□ -1.68
SMG1-209ENST00000563836 FLG2Q5D862 2391 aaPredicted RBP4.55□□□□□ -1.68
SMG1-209ENST00000563836 COX7CP15954 63 aa4.55□□□□□ -1.68
SMG1-209ENST00000563836 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms