RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 HIST1H4GQ99525 98 aa9.24□□□□□ -0.93
NME3-204ENST00000563498 MACF1Q9UPN3 7388 aaKnown RBP9.24□□□□□ -0.93
NME3-204ENST00000563498 H0YGX0 51 aa9.23□□□□□ -0.93
NME3-204ENST00000563498 H3BMG7 143 aa9.22□□□□□ -0.93
NME3-204ENST00000563498 GHRHP01286 108 aa9.2□□□□□ -0.94
NME3-204ENST00000563498 FAM218AQ96MZ4 157 aa9.2□□□□□ -0.94
NME3-204ENST00000563498 LINC00846Q9NV44 126 aa9.2□□□□□ -0.94
NME3-204ENST00000563498 RAB37Q96AX2 223 aa9.19□□□□□ -0.94
NME3-204ENST00000563498 A0A1W2PNM2 257 aa9.18□□□□□ -0.94
NME3-204ENST00000563498 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
NME3-204ENST00000563498 IGKV4-1P06312 121 aa9.17□□□□□ -0.94
NME3-204ENST00000563498 CEND1Q8N111 149 aa9.17□□□□□ -0.94
NME3-204ENST00000563498 A0A1B0GX51 115 aa9.15□□□□□ -0.94
NME3-204ENST00000563498 KRTAP19-6Q3LI70 58 aa9.15□□□□□ -0.94
NME3-204ENST00000563498 PRO0461Q9UI25 63 aa9.15□□□□□ -0.94
NME3-204ENST00000563498 FXYD2P54710 66 aa9.14□□□□□ -0.95
NME3-204ENST00000563498 A0A0B4J2C4 111 aa9.13□□□□□ -0.95
NME3-204ENST00000563498 NAA38Q9BRA0 125 aaKnown RBP9.13□□□□□ -0.95
NME3-204ENST00000563498 TRBV7-4A0A0J9YYF1 115 aa9.12□□□□□ -0.95
NME3-204ENST00000563498 LYRM7Q5U5X0 104 aa9.12□□□□□ -0.95
NME3-204ENST00000563498 ETDBQ3ZM63 59 aa9.11□□□□□ -0.95
NME3-204ENST00000563498 LINC00472Q9H8W2 130 aa9.09□□□□□ -0.95
NME3-204ENST00000563498 ANKRD29Q8N6D5 301 aa9.08□□□□□ -0.96
NME3-204ENST00000563498 IGHV6-1A0A0B4J1U7 121 aa9.06□□□□□ -0.96
NME3-204ENST00000563498 DEFB116Q30KQ4 102 aa9.05□□□□□ -0.96
NME3-204ENST00000563498 ANAPC13Q9BS18 74 aa9.05□□□□□ -0.96
NME3-204ENST00000563498 K7ERJ3 54 aa9.02□□□□□ -0.97
NME3-204ENST00000563498 MT-ATP8P03928 68 aa9.02□□□□□ -0.97
NME3-204ENST00000563498 C8orf87E5RJ46 101 aa9.01□□□□□ -0.97
NME3-204ENST00000563498 H3BQ85 93 aa9.01□□□□□ -0.97
NME3-204ENST00000563498 PRO1854Q9UHT4 67 aa9.01□□□□□ -0.97
NME3-204ENST00000563498 A8MWP4 228 aa9□□□□□ -0.97
NME3-204ENST00000563498 TRACP01848 142 aa8.99□□□□□ -0.97
NME3-204ENST00000563498 CCKP06307 115 aa8.99□□□□□ -0.97
NME3-204ENST00000563498 SMCPP49901 116 aaPredicted RBP8.99□□□□□ -0.97
NME3-204ENST00000563498 SPINK7P58062 85 aa8.99□□□□□ -0.97
NME3-204ENST00000563498 ZCCHC13Q8WW36 166 aaKnown RBP8.99□□□□□ -0.97
NME3-204ENST00000563498 ORMDL1Q9P0S3 153 aa8.99□□□□□ -0.97
NME3-204ENST00000563498 A0A1B0GVX0 72 aa8.98□□□□□ -0.97
NME3-204ENST00000563498 TRIAP1O43715 76 aa8.98□□□□□ -0.97
NME3-204ENST00000563498 DNAL4O96015 105 aa8.97□□□□□ -0.97
NME3-204ENST00000563498 KRTAP6-3Q3LI67 103 aa8.97□□□□□ -0.97
NME3-204ENST00000563498 TMEM256-PLSCR3K7ERE1 68 aa8.95□□□□□ -0.98
NME3-204ENST00000563498 SCGB1C2P0DMR2 95 aa8.92□□□□□ -0.98
NME3-204ENST00000563498 PSMB2P49721 201 aa8.92□□□□□ -0.98
NME3-204ENST00000563498 Q8N9P0 234 aaPredicted RBP8.89□□□□□ -0.99
NME3-204ENST00000563498 WFDC13Q8IUB5 93 aa8.88□□□□□ -0.99
NME3-204ENST00000563498 J3KT08 172 aa8.87□□□□□ -0.99
NME3-204ENST00000563498 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
NME3-204ENST00000563498 FAM240AA0A1B0GVK7 77 aa8.84□□□□□ -0.99
NME3-204ENST00000563498 CCDC179H3BU77 68 aa8.84□□□□□ -0.99
NME3-204ENST00000563498 COX6CP09669 75 aa8.83□□□□□ -1
NME3-204ENST00000563498 IMUPQ9GZP8 106 aa8.83□□□□□ -1
NME3-204ENST00000563498 RBM3P98179 157 aaKnown RBP8.81□□□□□ -1
NME3-204ENST00000563498 ATXN8Q156A1 80 aa8.81□□□□□ -1
NME3-204ENST00000563498 NDUFB1O75438 58 aa8.8□□□□□ -1
NME3-204ENST00000563498 C5orf47Q569G3 176 aa8.8□□□□□ -1
NME3-204ENST00000563498 DSCR8Q96T75 97 aa8.8□□□□□ -1
NME3-204ENST00000563498 H3BT86 120 aa8.78□□□□□ -1
NME3-204ENST00000563498 C9JAW5 83 aa8.77□□□□□ -1.01
NME3-204ENST00000563498 ACYP1P07311 99 aa8.77□□□□□ -1.01
NME3-204ENST00000563498 Q6ZQT0 140 aa8.76□□□□□ -1.01
NME3-204ENST00000563498 RPS28P62857 69 aaKnown RBP8.75□□□□□ -1.01
NME3-204ENST00000563498 C8orf17Q9NRJ1 99 aa8.75□□□□□ -1.01
NME3-204ENST00000563498 NEBP20929 6669 aa8.74□□□□□ -1.01
NME3-204ENST00000563498 H1FX-AS1Q4G0G2 97 aa8.73□□□□□ -1.01
NME3-204ENST00000563498 IGKV3D-7A0A0C4DH55 119 aa8.7□□□□□ -1.02
NME3-204ENST00000563498 UQCRQO14949 82 aa8.7□□□□□ -1.02
NME3-204ENST00000563498 Q6ZVQ6 151 aa8.69□□□□□ -1.02
NME3-204ENST00000563498 A0A1B0GW54 56 aa8.66□□□□□ -1.02
NME3-204ENST00000563498 LINC00643Q86TS7 51 aa8.66□□□□□ -1.02
NME3-204ENST00000563498 BAALC-AS2P0C853 105 aa8.64□□□□□ -1.03
NME3-204ENST00000563498 COX7CP15954 63 aa8.61□□□□□ -1.03
NME3-204ENST00000563498 PRR15Q8IV56 129 aa8.61□□□□□ -1.03
NME3-204ENST00000563498 MUC12Q9UKN1 5478 aa8.59□□□□□ -1.03
NME3-204ENST00000563498 TMEM254Q8TBM7 123 aa8.59□□□□□ -1.03
NME3-204ENST00000563498 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
NME3-204ENST00000563498 LOC110117498A0A087WWA1 95 aa8.58□□□□□ -1.04
NME3-204ENST00000563498 FAM236AA0A1B0GUQ0 79 aa8.58□□□□□ -1.04
NME3-204ENST00000563498 FAM236BA0A1B0GV22 79 aa8.58□□□□□ -1.04
NME3-204ENST00000563498 JMJD7-PLA2G4BH0Y9G9 81 aa8.58□□□□□ -1.04
NME3-204ENST00000563498 ATOX1O00244 68 aa8.58□□□□□ -1.04
NME3-204ENST00000563498 MMP24-AS1A0A0U1RRL7 71 aa8.56□□□□□ -1.04
NME3-204ENST00000563498 TMEM258P61165 79 aa8.56□□□□□ -1.04
NME3-204ENST00000563498 HIST1H4AP62805 103 aaKnown RBP8.56□□□□□ -1.04
NME3-204ENST00000563498 A6NN06 94 aa8.55□□□□□ -1.04
NME3-204ENST00000563498 PDE6GP18545 87 aa8.55□□□□□ -1.04
NME3-204ENST00000563498 hDV103S1A0JD37 113 aa8.5□□□□□ -1.05
NME3-204ENST00000563498 NREPQ16612 68 aa8.5□□□□□ -1.05
NME3-204ENST00000563498 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
NME3-204ENST00000563498 IGKV2D-30A0A075B6S6 120 aa8.49□□□□□ -1.05
NME3-204ENST00000563498 NDUFS5O43920 106 aa8.49□□□□□ -1.05
NME3-204ENST00000563498 IGKV2-30P06310 120 aa8.49□□□□□ -1.05
NME3-204ENST00000563498 KRTAP20-1Q3LI63 56 aa8.49□□□□□ -1.05
NME3-204ENST00000563498 MT1BP07438 61 aa8.48□□□□□ -1.05
NME3-204ENST00000563498 SERP2Q8N6R1 65 aa8.46□□□□□ -1.06
NME3-204ENST00000563498 C14orf132Q9NPU4 83 aa8.46□□□□□ -1.06
NME3-204ENST00000563498 Q5VV11 94 aa8.45□□□□□ -1.06
NME3-204ENST00000563498 K7EQZ3 153 aa8.44□□□□□ -1.06
NME3-204ENST00000563498 Q5W150 140 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms