RNA–Protein interactions for RNA: ENST00000563328.4

AC004943.2-201, humanhuman

TSL 3 BASIC

Gene AC004943.2, Length 4,842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.2-201ENST00000563328 LINC00472Q9H8W2 130 aa9.41□□□□□ -0.9
AC004943.2-201ENST00000563328 C20orf166-AS1Q96NR2 134 aa9.39□□□□□ -0.91
AC004943.2-201ENST00000563328 SMG1Q96Q15 3661 aaKnown RBP9.38□□□□□ -0.91
AC004943.2-201ENST00000563328 A8MUU9 505 aa9.34□□□□□ -0.91
AC004943.2-201ENST00000563328 TNP2Q05952 138 aa9.33□□□□□ -0.92
AC004943.2-201ENST00000563328 ANAPC11Q9NYG5 84 aa9.33□□□□□ -0.92
AC004943.2-201ENST00000563328 LINC00483Q53H64 154 aa9.32□□□□□ -0.92
AC004943.2-201ENST00000563328 ZNF861PO60384 105 aa9.31□□□□□ -0.92
AC004943.2-201ENST00000563328 RPL37P61927 97 aaKnown RBP9.3□□□□□ -0.92
AC004943.2-201ENST00000563328 Q5W150 140 aa9.28□□□□□ -0.92
AC004943.2-201ENST00000563328 SPRR1AP35321 89 aa9.28□□□□□ -0.92
AC004943.2-201ENST00000563328 CELSR1Q9NYQ6 3014 aa9.27□□□□□ -0.93
AC004943.2-201ENST00000563328 SMR3BP02814 79 aaPredicted RBP9.26□□□□□ -0.93
AC004943.2-201ENST00000563328 TYMSOSQ8TAI1 123 aa9.25□□□□□ -0.93
AC004943.2-201ENST00000563328 PSORS1C2Q9UIG4 136 aa9.25□□□□□ -0.93
AC004943.2-201ENST00000563328 CAMK2N1Q7Z7J9 78 aa9.24□□□□□ -0.93
AC004943.2-201ENST00000563328 KRTAP1-5Q9BYS1 174 aa9.22□□□□□ -0.93
AC004943.2-201ENST00000563328 BSNQ9UPA5 3926 aa9.22□□□□□ -0.93
AC004943.2-201ENST00000563328 CSMD1Q96PZ7 3565 aa9.22□□□□□ -0.93
AC004943.2-201ENST00000563328 H1FX-AS1Q4G0G2 97 aa9.22□□□□□ -0.93
AC004943.2-201ENST00000563328 SVEP1Q4LDE5 3571 aa9.2□□□□□ -0.94
AC004943.2-201ENST00000563328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
AC004943.2-201ENST00000563328 KRTAP26-1Q6PEX3 210 aa9.17□□□□□ -0.94
AC004943.2-201ENST00000563328 SPENQ96T58 3664 aaKnown RBP9.14□□□□□ -0.95
AC004943.2-201ENST00000563328 TENM1Q9UKZ4 2725 aa9.12□□□□□ -0.95
AC004943.2-201ENST00000563328 PANO1I0J062 215 aa9.12□□□□□ -0.95
AC004943.2-201ENST00000563328 KRTAP11-1Q8IUC1 163 aa9.12□□□□□ -0.95
AC004943.2-201ENST00000563328 SPRR1BP22528 89 aa9.11□□□□□ -0.95
AC004943.2-201ENST00000563328 CUBNO60494 3623 aa9.1□□□□□ -0.95
AC004943.2-201ENST00000563328 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
AC004943.2-201ENST00000563328 LINC00304Q8N9R0 145 aa9.08□□□□□ -0.96
AC004943.2-201ENST00000563328 FBN1P35555 2871 aaKnown RBP9.08□□□□□ -0.96
AC004943.2-201ENST00000563328 OTOGQ6ZRI0 2925 aa9.07□□□□□ -0.96
AC004943.2-201ENST00000563328 PLAC8Q9NZF1 115 aa9.06□□□□□ -0.96
AC004943.2-201ENST00000563328 NBPF19A0A087WUL8 3843 aa9.05□□□□□ -0.96
AC004943.2-201ENST00000563328 ZFHX3Q15911 3703 aa9.04□□□□□ -0.96
AC004943.2-201ENST00000563328 PDZD2O15018 2839 aa9.03□□□□□ -0.96
AC004943.2-201ENST00000563328 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
AC004943.2-201ENST00000563328 TENM3Q9P273 2699 aa9.01□□□□□ -0.97
AC004943.2-201ENST00000563328 VWFP04275 2813 aa9.01□□□□□ -0.97
AC004943.2-201ENST00000563328 CSMD2Q7Z408 3487 aa9.01□□□□□ -0.97
AC004943.2-201ENST00000563328 C9orf92A6NGG3 77 aa8.95□□□□□ -0.98
AC004943.2-201ENST00000563328 PKD1L1Q8TDX9 2849 aa8.95□□□□□ -0.98
AC004943.2-201ENST00000563328 KRTAP21-3Q3LHN1 58 aa8.93□□□□□ -0.98
AC004943.2-201ENST00000563328 KRTAP10-2P60368 255 aa8.9□□□□□ -0.98
AC004943.2-201ENST00000563328 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
AC004943.2-201ENST00000563328 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
AC004943.2-201ENST00000563328 Q6ZSA8 131 aa8.75□□□□□ -1.01
AC004943.2-201ENST00000563328 KRTAP7-1Q8IUC3 87 aa8.75□□□□□ -1.01
AC004943.2-201ENST00000563328 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
AC004943.2-201ENST00000563328 PLAC4Q8WY50 150 aa8.75□□□□□ -1.01
AC004943.2-201ENST00000563328 Q6ZRN7 208 aaPredicted RBP8.74□□□□□ -1.01
AC004943.2-201ENST00000563328 TENM2Q9NT68 2774 aa8.71□□□□□ -1.01
AC004943.2-201ENST00000563328 TGP01266 2768 aa8.71□□□□□ -1.02
AC004943.2-201ENST00000563328 H0YAA0 97 aa8.68□□□□□ -1.02
AC004943.2-201ENST00000563328 S4R3F8 94 aa8.68□□□□□ -1.02
AC004943.2-201ENST00000563328 P0C880 135 aa8.66□□□□□ -1.02
AC004943.2-201ENST00000563328 R4GN34 69 aa8.6□□□□□ -1.03
AC004943.2-201ENST00000563328 VPS13CQ709C8 3753 aa8.58□□□□□ -1.04
AC004943.2-201ENST00000563328 TRRAPQ9Y4A5 3859 aa8.56□□□□□ -1.04
AC004943.2-201ENST00000563328 Q5VSD8 79 aa8.55□□□□□ -1.04
AC004943.2-201ENST00000563328 ANK3Q12955 4377 aaKnown RBP8.52□□□□□ -1.04
AC004943.2-201ENST00000563328 M0QZ58 72 aa8.48□□□□□ -1.05
AC004943.2-201ENST00000563328 ZNF469Q96JG9 3925 aaPredicted RBP8.47□□□□□ -1.05
AC004943.2-201ENST00000563328 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
AC004943.2-201ENST00000563328 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
AC004943.2-201ENST00000563328 M0R2T5 61 aa8.39□□□□□ -1.07
AC004943.2-201ENST00000563328 KRTAP13-2Q52LG2 175 aa8.38□□□□□ -1.07
AC004943.2-201ENST00000563328 AKAP9Q99996 3911 aa8.36□□□□□ -1.07
AC004943.2-201ENST00000563328 TPRXLQ17RH7 258 aa8.28□□□□□ -1.08
AC004943.2-201ENST00000563328 PP632Q6XCG6 107 aa8.27□□□□□ -1.09
AC004943.2-201ENST00000563328 KRTAP10-8P60410 259 aa8.22□□□□□ -1.09
AC004943.2-201ENST00000563328 KRTAP15-1Q3LI76 137 aa8.21□□□□□ -1.1
AC004943.2-201ENST00000563328 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
AC004943.2-201ENST00000563328 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
AC004943.2-201ENST00000563328 KRTAP1-4P0C5Y4 121 aa8.11□□□□□ -1.11
AC004943.2-201ENST00000563328 COL7A1Q02388 2944 aa8.09□□□□□ -1.11
AC004943.2-201ENST00000563328 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.12
AC004943.2-201ENST00000563328 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
AC004943.2-201ENST00000563328 TNP1P09430 55 aa8.02□□□□□ -1.13
AC004943.2-201ENST00000563328 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.15
AC004943.2-201ENST00000563328 KRTAP12-2P59991 146 aa7.84□□□□□ -1.15
AC004943.2-201ENST00000563328 CSMD3Q7Z407 3707 aa7.84□□□□□ -1.15
AC004943.2-201ENST00000563328 A0A1B0GVY2 172 aa7.82□□□□□ -1.16
AC004943.2-201ENST00000563328 INE1O15225 51 aa7.78□□□□□ -1.16
AC004943.2-201ENST00000563328 XP32Q5T750 250 aa7.77□□□□□ -1.17
AC004943.2-201ENST00000563328 HUWE1Q7Z6Z7 4374 aaKnown RBP7.75□□□□□ -1.17
AC004943.2-201ENST00000563328 KRTAP12-1P59990 96 aa7.71□□□□□ -1.18
AC004943.2-201ENST00000563328 ANK2Q01484 3957 aa7.62□□□□□ -1.19
AC004943.2-201ENST00000563328 DNHD1Q96M86 4753 aa7.62□□□□□ -1.19
AC004943.2-201ENST00000563328 DNAH9Q9NYC9 4486 aa7.61□□□□□ -1.19
AC004943.2-201ENST00000563328 KRTAP13-4Q3LI77 160 aa7.57□□□□□ -1.2
AC004943.2-201ENST00000563328 KRTAP3-1Q9BYR8 98 aa7.49□□□□□ -1.21
AC004943.2-201ENST00000563328 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
AC004943.2-201ENST00000563328 CMYA5Q8N3K9 4069 aa7.46□□□□□ -1.21
AC004943.2-201ENST00000563328 PRKDCP78527 4128 aaKnown RBP7.45□□□□□ -1.22
AC004943.2-201ENST00000563328 DNAH3Q8TD57 4116 aa7.42□□□□□ -1.22
AC004943.2-201ENST00000563328 PLECQ15149 4684 aaKnown RBP7.42□□□□□ -1.22
AC004943.2-201ENST00000563328 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
AC004943.2-201ENST00000563328 STARD9Q9P2P6 4700 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms