RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 A8MUU9 505 aa9.78□□□□□ -0.84
MAP1LC3B-203ENST00000562778 H3BT86 120 aa9.77□□□□□ -0.85
MAP1LC3B-203ENST00000562778 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
MAP1LC3B-203ENST00000562778 TRBV7-4A0A0J9YYF1 115 aa9.75□□□□□ -0.85
MAP1LC3B-203ENST00000562778 TMEM256-PLSCR3K7ERE1 68 aa9.75□□□□□ -0.85
MAP1LC3B-203ENST00000562778 DEFB116Q30KQ4 102 aa9.74□□□□□ -0.85
MAP1LC3B-203ENST00000562778 H3BQ85 93 aa9.73□□□□□ -0.85
MAP1LC3B-203ENST00000562778 IGKV4-1P06312 121 aa9.73□□□□□ -0.85
MAP1LC3B-203ENST00000562778 BAALC-AS2P0C853 105 aa9.72□□□□□ -0.85
MAP1LC3B-203ENST00000562778 CCKP06307 115 aa9.71□□□□□ -0.86
MAP1LC3B-203ENST00000562778 LINC00313P59037 77 aa9.69□□□□□ -0.86
MAP1LC3B-203ENST00000562778 NOTCH2NLQ7Z3S9 236 aa9.69□□□□□ -0.86
MAP1LC3B-203ENST00000562778 LINC00472Q9H8W2 130 aa9.69□□□□□ -0.86
MAP1LC3B-203ENST00000562778 ETDBQ3ZM63 59 aa9.68□□□□□ -0.86
MAP1LC3B-203ENST00000562778 CRCT1Q9UGL9 99 aa9.68□□□□□ -0.86
MAP1LC3B-203ENST00000562778 KRTAP16-1A8MUX0 517 aa9.67□□□□□ -0.86
MAP1LC3B-203ENST00000562778 VPS25Q9BRG1 176 aa9.67□□□□□ -0.86
MAP1LC3B-203ENST00000562778 RBM3P98179 157 aaKnown RBP9.63□□□□□ -0.87
MAP1LC3B-203ENST00000562778 IGHV6-1A0A0B4J1U7 121 aa9.62□□□□□ -0.87
MAP1LC3B-203ENST00000562778 DSCR8Q96T75 97 aa9.6□□□□□ -0.87
MAP1LC3B-203ENST00000562778 JMJD7-PLA2G4BH0Y9G9 81 aa9.56□□□□□ -0.88
MAP1LC3B-203ENST00000562778 A0A1B0GVX0 72 aa9.54□□□□□ -0.88
MAP1LC3B-203ENST00000562778 J3QR89 54 aa9.53□□□□□ -0.88
MAP1LC3B-203ENST00000562778 K7ERU9 68 aa9.52□□□□□ -0.89
MAP1LC3B-203ENST00000562778 C14orf132Q9NPU4 83 aa9.52□□□□□ -0.89
MAP1LC3B-203ENST00000562778 Q6ZQT0 140 aa9.51□□□□□ -0.89
MAP1LC3B-203ENST00000562778 C8orf87E5RJ46 101 aa9.49□□□□□ -0.89
MAP1LC3B-203ENST00000562778 HRES1P13985 223 aa9.49□□□□□ -0.89
MAP1LC3B-203ENST00000562778 FAM236DA0A1B0GTK5 79 aa9.47□□□□□ -0.89
MAP1LC3B-203ENST00000562778 FAM236CP0DP71 79 aa9.47□□□□□ -0.89
MAP1LC3B-203ENST00000562778 LOC110117498A0A087WWA1 95 aa9.46□□□□□ -0.9
MAP1LC3B-203ENST00000562778 MPLKIPQ8TAP9 179 aa9.46□□□□□ -0.9
MAP1LC3B-203ENST00000562778 KRTAP9-8Q9BYQ0 159 aa9.46□□□□□ -0.9
MAP1LC3B-203ENST00000562778 J3KT08 172 aa9.45□□□□□ -0.9
MAP1LC3B-203ENST00000562778 PDE6GP18545 87 aa9.44□□□□□ -0.9
MAP1LC3B-203ENST00000562778 C21orf62-AS1Q17RA5 79 aa9.43□□□□□ -0.9
MAP1LC3B-203ENST00000562778 FAM240AA0A1B0GVK7 77 aa9.42□□□□□ -0.9
MAP1LC3B-203ENST00000562778 ZCCHC13Q8WW36 166 aaKnown RBP9.4□□□□□ -0.9
MAP1LC3B-203ENST00000562778 RBM12B-AS1Q9P1G2 102 aa9.4□□□□□ -0.9
MAP1LC3B-203ENST00000562778 ACYP1P07311 99 aa9.39□□□□□ -0.91
MAP1LC3B-203ENST00000562778 NDUFB1O75438 58 aa9.38□□□□□ -0.91
MAP1LC3B-203ENST00000562778 USH2AO75445 5202 aa9.37□□□□□ -0.91
MAP1LC3B-203ENST00000562778 A8MWP4 228 aa9.37□□□□□ -0.91
MAP1LC3B-203ENST00000562778 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
MAP1LC3B-203ENST00000562778 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
MAP1LC3B-203ENST00000562778 Q8N9P0 234 aaPredicted RBP9.35□□□□□ -0.91
MAP1LC3B-203ENST00000562778 A0A1B0GW54 56 aa9.34□□□□□ -0.91
MAP1LC3B-203ENST00000562778 SPINK7P58062 85 aa9.34□□□□□ -0.91
MAP1LC3B-203ENST00000562778 MT2AP02795 61 aa9.33□□□□□ -0.92
MAP1LC3B-203ENST00000562778 SSPOA2VEC9 5147 aa9.3□□□□□ -0.92
MAP1LC3B-203ENST00000562778 LINC00846Q9NV44 126 aa9.3□□□□□ -0.92
MAP1LC3B-203ENST00000562778 NREPQ16612 68 aa9.29□□□□□ -0.92
MAP1LC3B-203ENST00000562778 Q6ZVQ6 151 aa9.28□□□□□ -0.92
MAP1LC3B-203ENST00000562778 PRR15Q8IV56 129 aa9.28□□□□□ -0.92
MAP1LC3B-203ENST00000562778 MT1FP04733 61 aa9.27□□□□□ -0.93
MAP1LC3B-203ENST00000562778 UBL5Q9BZL1 73 aa9.25□□□□□ -0.93
MAP1LC3B-203ENST00000562778 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
MAP1LC3B-203ENST00000562778 LINC00643Q86TS7 51 aa9.22□□□□□ -0.93
MAP1LC3B-203ENST00000562778 WFDC13Q8IUB5 93 aa9.22□□□□□ -0.93
MAP1LC3B-203ENST00000562778 K7EQZ3 153 aa9.21□□□□□ -0.94
MAP1LC3B-203ENST00000562778 MRPL34Q9BQ48 92 aaKnown RBP9.2□□□□□ -0.94
MAP1LC3B-203ENST00000562778 KRTAP10-10P60014 251 aa9.19□□□□□ -0.94
MAP1LC3B-203ENST00000562778 TMEM254Q8TBM7 123 aa9.19□□□□□ -0.94
MAP1LC3B-203ENST00000562778 ATP5EP2Q5VTU8 51 aa9.17□□□□□ -0.94
MAP1LC3B-203ENST00000562778 LCE2BO14633 110 aa9.16□□□□□ -0.94
MAP1LC3B-203ENST00000562778 MT-ATP8P03928 68 aa9.16□□□□□ -0.94
MAP1LC3B-203ENST00000562778 KRTAP9-3Q9BYQ3 159 aa9.16□□□□□ -0.94
MAP1LC3B-203ENST00000562778 hDV103S1A0JD37 113 aa9.15□□□□□ -0.94
MAP1LC3B-203ENST00000562778 NDUFS5O43920 106 aa9.14□□□□□ -0.95
MAP1LC3B-203ENST00000562778 BPY2O14599 106 aa9.12□□□□□ -0.95
MAP1LC3B-203ENST00000562778 Q8N9L7 120 aa9.11□□□□□ -0.95
MAP1LC3B-203ENST00000562778 CXCL6P80162 114 aa9.09□□□□□ -0.95
MAP1LC3B-203ENST00000562778 FCGBPQ9Y6R7 5405 aaPredicted RBP9.08□□□□□ -0.96
MAP1LC3B-203ENST00000562778 Q5W150 140 aa9.06□□□□□ -0.96
MAP1LC3B-203ENST00000562778 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
MAP1LC3B-203ENST00000562778 IGKV2D-30A0A075B6S6 120 aa9.04□□□□□ -0.96
MAP1LC3B-203ENST00000562778 IGKV2-30P06310 120 aa9.04□□□□□ -0.96
MAP1LC3B-203ENST00000562778 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.01□□□□□ -0.97
MAP1LC3B-203ENST00000562778 HIST1H4AP62805 103 aaKnown RBP9.01□□□□□ -0.97
MAP1LC3B-203ENST00000562778 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
MAP1LC3B-203ENST00000562778 KRTAP19-1Q8IUB9 90 aa9.01□□□□□ -0.97
MAP1LC3B-203ENST00000562778 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
MAP1LC3B-203ENST00000562778 HCG22E2RYF7 251 aa8.98□□□□□ -0.97
MAP1LC3B-203ENST00000562778 A0A087WVE0 104 aa8.96□□□□□ -0.98
MAP1LC3B-203ENST00000562778 C7orf65Q6ZTY9 151 aa8.96□□□□□ -0.98
MAP1LC3B-203ENST00000562778 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
MAP1LC3B-203ENST00000562778 FAM236AA0A1B0GUQ0 79 aa8.91□□□□□ -0.98
MAP1LC3B-203ENST00000562778 FAM236BA0A1B0GV22 79 aa8.91□□□□□ -0.98
MAP1LC3B-203ENST00000562778 KRTAP9-7A8MTY7 169 aa8.91□□□□□ -0.98
MAP1LC3B-203ENST00000562778 C4orf26Q17RF5 130 aa8.89□□□□□ -0.99
MAP1LC3B-203ENST00000562778 ATOX1O00244 68 aa8.8□□□□□ -1
MAP1LC3B-203ENST00000562778 KRTAP19-6Q3LI70 58 aa8.8□□□□□ -1
MAP1LC3B-203ENST00000562778 MACF1Q9UPN3 7388 aaKnown RBP8.79□□□□□ -1
MAP1LC3B-203ENST00000562778 KRTAP3-1Q9BYR8 98 aa8.78□□□□□ -1
MAP1LC3B-203ENST00000562778 SYNE2Q8WXH0 6885 aaKnown RBP8.77□□□□□ -1.01
MAP1LC3B-203ENST00000562778 C5orf47Q569G3 176 aa8.74□□□□□ -1.01
MAP1LC3B-203ENST00000562778 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
MAP1LC3B-203ENST00000562778 SMIM20Q8N5G0 67 aa8.72□□□□□ -1.01
MAP1LC3B-203ENST00000562778 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
MAP1LC3B-203ENST00000562778 OCR1Q9BZK8 76 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms