RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
SF3B3-202ENST00000562722 ORMDL1Q9P0S3 153 aa6.41□□□□□ -1.38
SF3B3-202ENST00000562722 CCKP06307 115 aa6.4□□□□□ -1.38
SF3B3-202ENST00000562722 VAMP8Q9BV40 100 aa6.39□□□□□ -1.39
SF3B3-202ENST00000562722 LINC00472Q9H8W2 130 aa6.39□□□□□ -1.39
SF3B3-202ENST00000562722 H3BQ85 93 aa6.38□□□□□ -1.39
SF3B3-202ENST00000562722 PSMB2P49721 201 aa6.38□□□□□ -1.39
SF3B3-202ENST00000562722 TMEM256-PLSCR3K7ERE1 68 aa6.37□□□□□ -1.39
SF3B3-202ENST00000562722 FXYD2P54710 66 aa6.37□□□□□ -1.39
SF3B3-202ENST00000562722 VPS25Q9BRG1 176 aa6.37□□□□□ -1.39
SF3B3-202ENST00000562722 C8orf87E5RJ46 101 aa6.36□□□□□ -1.39
SF3B3-202ENST00000562722 LINC00846Q9NV44 126 aa6.36□□□□□ -1.39
SF3B3-202ENST00000562722 A0A1B0GVX0 72 aa6.35□□□□□ -1.39
SF3B3-202ENST00000562722 COX6CP09669 75 aa6.33□□□□□ -1.4
SF3B3-202ENST00000562722 SPINK7P58062 85 aa6.33□□□□□ -1.4
SF3B3-202ENST00000562722 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
SF3B3-202ENST00000562722 K7ERJ3 54 aa6.32□□□□□ -1.4
SF3B3-202ENST00000562722 LOC105371267A0A1B0GV96 52 aa6.3□□□□□ -1.4
SF3B3-202ENST00000562722 UBE2V1Q13404 147 aa6.3□□□□□ -1.4
SF3B3-202ENST00000562722 LYRM7Q5U5X0 104 aa6.29□□□□□ -1.4
SF3B3-202ENST00000562722 DSCR8Q96T75 97 aa6.29□□□□□ -1.4
SF3B3-202ENST00000562722 J3KT08 172 aa6.28□□□□□ -1.4
SF3B3-202ENST00000562722 RBM3P98179 157 aaKnown RBP6.28□□□□□ -1.4
SF3B3-202ENST00000562722 HSD52Q0P140 79 aa6.28□□□□□ -1.4
SF3B3-202ENST00000562722 A8MWP4 228 aa6.27□□□□□ -1.41
SF3B3-202ENST00000562722 WFDC13Q8IUB5 93 aa6.27□□□□□ -1.41
SF3B3-202ENST00000562722 NDUFB1O75438 58 aa6.26□□□□□ -1.41
SF3B3-202ENST00000562722 KRTAP19-6Q3LI70 58 aa6.26□□□□□ -1.41
SF3B3-202ENST00000562722 SCGB1C2P0DMR2 95 aa6.25□□□□□ -1.41
SF3B3-202ENST00000562722 C9JAW5 83 aa6.23□□□□□ -1.41
SF3B3-202ENST00000562722 Q8N9P0 234 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-202ENST00000562722 Q6ZQT0 140 aa6.21□□□□□ -1.42
SF3B3-202ENST00000562722 C8orf17Q9NRJ1 99 aa6.2□□□□□ -1.42
SF3B3-202ENST00000562722 BAALC-AS2P0C853 105 aa6.19□□□□□ -1.42
SF3B3-202ENST00000562722 SMIM6P0DI80 62 aa6.17□□□□□ -1.42
SF3B3-202ENST00000562722 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.42
SF3B3-202ENST00000562722 Q6ZVQ6 151 aa6.15□□□□□ -1.42
SF3B3-202ENST00000562722 PYY3Q5JQD4 70 aa6.14□□□□□ -1.43
SF3B3-202ENST00000562722 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
SF3B3-202ENST00000562722 KRTAP6-3Q3LI67 103 aa6.12□□□□□ -1.43
SF3B3-202ENST00000562722 H1FX-AS1Q4G0G2 97 aa6.12□□□□□ -1.43
SF3B3-202ENST00000562722 JMJD7-PLA2G4BH0Y9G9 81 aa6.11□□□□□ -1.43
SF3B3-202ENST00000562722 LOC110117498A0A087WWA1 95 aa6.1□□□□□ -1.43
SF3B3-202ENST00000562722 A0A1B0GW54 56 aa6.1□□□□□ -1.43
SF3B3-202ENST00000562722 NDUFS5O43920 106 aa6.1□□□□□ -1.43
SF3B3-202ENST00000562722 PRR15Q8IV56 129 aa6.1□□□□□ -1.43
SF3B3-202ENST00000562722 ATXN8Q156A1 80 aa6.09□□□□□ -1.43
SF3B3-202ENST00000562722 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
SF3B3-202ENST00000562722 MRPL34Q9BQ48 92 aaKnown RBP6.09□□□□□ -1.43
SF3B3-202ENST00000562722 PDE6GP18545 87 aa6.08□□□□□ -1.44
SF3B3-202ENST00000562722 NREPQ16612 68 aa6.08□□□□□ -1.44
SF3B3-202ENST00000562722 TMEM254Q8TBM7 123 aa6.08□□□□□ -1.44
SF3B3-202ENST00000562722 NEBP20929 6669 aa6.08□□□□□ -1.44
SF3B3-202ENST00000562722 C14orf132Q9NPU4 83 aa6.07□□□□□ -1.44
SF3B3-202ENST00000562722 IGKV2D-30A0A075B6S6 120 aa6.06□□□□□ -1.44
SF3B3-202ENST00000562722 MMP24-AS1A0A0U1RRL7 71 aa6.06□□□□□ -1.44
SF3B3-202ENST00000562722 IGKV2-30P06310 120 aa6.06□□□□□ -1.44
SF3B3-202ENST00000562722 NAA38Q9BRA0 125 aaKnown RBP6.05□□□□□ -1.44
SF3B3-202ENST00000562722 hDV103S1A0JD37 113 aa6.04□□□□□ -1.44
SF3B3-202ENST00000562722 TSTD3H0UI37 97 aa6.04□□□□□ -1.44
SF3B3-202ENST00000562722 H3BS24 57 aa6.02□□□□□ -1.45
SF3B3-202ENST00000562722 K7EQZ3 153 aa6.01□□□□□ -1.45
SF3B3-202ENST00000562722 C7orf65Q6ZTY9 151 aa6.01□□□□□ -1.45
SF3B3-202ENST00000562722 PCP4L1A6NKN8 68 aa5.99□□□□□ -1.45
SF3B3-202ENST00000562722 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
SF3B3-202ENST00000562722 FAM236AA0A1B0GUQ0 79 aa5.98□□□□□ -1.45
SF3B3-202ENST00000562722 FAM236BA0A1B0GV22 79 aa5.98□□□□□ -1.45
SF3B3-202ENST00000562722 M0R143 59 aa5.98□□□□□ -1.45
SF3B3-202ENST00000562722 Q5W150 140 aa5.96□□□□□ -1.46
SF3B3-202ENST00000562722 A6NN06 94 aa5.95□□□□□ -1.46
SF3B3-202ENST00000562722 C4orf26Q17RF5 130 aa5.95□□□□□ -1.46
SF3B3-202ENST00000562722 BPY2O14599 106 aa5.94□□□□□ -1.46
SF3B3-202ENST00000562722 C5orf47Q569G3 176 aa5.94□□□□□ -1.46
SF3B3-202ENST00000562722 HCG22E2RYF7 251 aa5.92□□□□□ -1.46
SF3B3-202ENST00000562722 CASC2Q6XLA1 102 aa5.91□□□□□ -1.46
SF3B3-202ENST00000562722 Q5VV11 94 aa5.9□□□□□ -1.46
SF3B3-202ENST00000562722 Q8N9L7 120 aa5.9□□□□□ -1.46
SF3B3-202ENST00000562722 CXCL6P80162 114 aa5.87□□□□□ -1.47
SF3B3-202ENST00000562722 S4R3F8 94 aa5.87□□□□□ -1.47
SF3B3-202ENST00000562722 MT1BP07438 61 aa5.86□□□□□ -1.47
SF3B3-202ENST00000562722 BATFQ16520 125 aa5.86□□□□□ -1.47
SF3B3-202ENST00000562722 H3BT86 120 aa5.85□□□□□ -1.47
SF3B3-202ENST00000562722 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
SF3B3-202ENST00000562722 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
SF3B3-202ENST00000562722 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
SF3B3-202ENST00000562722 LCA10Q71F78 164 aa5.81□□□□□ -1.48
SF3B3-202ENST00000562722 C1orf64Q8NEQ6 169 aa5.81□□□□□ -1.48
SF3B3-202ENST00000562722 SPRR2GQ9BYE4 73 aa5.81□□□□□ -1.48
SF3B3-202ENST00000562722 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
SF3B3-202ENST00000562722 COL5A1-AS1Q5SY13 56 aa5.8□□□□□ -1.48
SF3B3-202ENST00000562722 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
SF3B3-202ENST00000562722 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
SF3B3-202ENST00000562722 MDN1Q9NU22 5596 aa5.78□□□□□ -1.48
SF3B3-202ENST00000562722 A0A1W2PPM0 123 aa5.76□□□□□ -1.49
SF3B3-202ENST00000562722 C9orf118A6NHY6 69 aa5.76□□□□□ -1.49
SF3B3-202ENST00000562722 KLKP1Q107X0 134 aa5.76□□□□□ -1.49
SF3B3-202ENST00000562722 IMUPQ9GZP8 106 aa5.76□□□□□ -1.49
SF3B3-202ENST00000562722 KMT2DO14686 5537 aa5.74□□□□□ -1.49
SF3B3-202ENST00000562722 UBL5Q9BZL1 73 aa5.73□□□□□ -1.49
SF3B3-202ENST00000562722 TAX1BP3O14907 124 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms