RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 COL12A1Q99715 3063 aa3.06□□□□□ -1.92
CAPN3-211ENST00000562199 DNAH1Q9P2D7 4330 aa3.05□□□□□ -1.92
CAPN3-211ENST00000562199 SPRR1BP22528 89 aa3.05□□□□□ -1.92
CAPN3-211ENST00000562199 MAP1AP78559 2803 aaPredicted RBP3.05□□□□□ -1.92
CAPN3-211ENST00000562199 USP9YO00507 2555 aaPredicted RBP3.05□□□□□ -1.92
CAPN3-211ENST00000562199 TLN2Q9Y4G6 2542 aa3.04□□□□□ -1.92
CAPN3-211ENST00000562199 ACACBO00763 2458 aa3.04□□□□□ -1.92
CAPN3-211ENST00000562199 CELSR2Q9HCU4 2923 aa3.04□□□□□ -1.92
CAPN3-211ENST00000562199 MXRA5Q9NR99 2828 aa3.04□□□□□ -1.92
CAPN3-211ENST00000562199 CHD8Q9HCK8 2581 aa3.04□□□□□ -1.92
CAPN3-211ENST00000562199 NAV2Q8IVL1 2488 aa3.04□□□□□ -1.92
CAPN3-211ENST00000562199 JMJD1CQ15652 2540 aa3.03□□□□□ -1.92
CAPN3-211ENST00000562199 CSMD2Q7Z408 3487 aa3.03□□□□□ -1.92
CAPN3-211ENST00000562199 ZANQ9Y493 2812 aa3.03□□□□□ -1.92
CAPN3-211ENST00000562199 SSBP3-AS1Q7Z2R9 100 aa3.03□□□□□ -1.92
CAPN3-211ENST00000562199 SMR3AQ99954 134 aa3.03□□□□□ -1.92
CAPN3-211ENST00000562199 ANAPC11Q9NYG5 84 aa3.03□□□□□ -1.92
CAPN3-211ENST00000562199 MYO9AB2RTY4 2548 aa3.03□□□□□ -1.92
CAPN3-211ENST00000562199 MMP24-AS1A0A0U1RRL7 71 aa3.02□□□□□ -1.93
CAPN3-211ENST00000562199 LY6G6CO95867 125 aa3.02□□□□□ -1.93
CAPN3-211ENST00000562199 UBR5O95071 2799 aaPredicted RBP3.02□□□□□ -1.93
CAPN3-211ENST00000562199 POLQO75417 2590 aa3.02□□□□□ -1.93
CAPN3-211ENST00000562199 CFAP46Q8IYW2 2715 aa3.01□□□□□ -1.93
CAPN3-211ENST00000562199 ITPR3Q14573 2671 aa3.01□□□□□ -1.93
CAPN3-211ENST00000562199 ZNF469Q96JG9 3925 aaPredicted RBP3.01□□□□□ -1.93
CAPN3-211ENST00000562199 PRLHP81277 87 aa3.01□□□□□ -1.93
CAPN3-211ENST00000562199 PTPN13Q12923 2485 aa3.01□□□□□ -1.93
CAPN3-211ENST00000562199 GCN1Q92616 2671 aaKnown RBP3□□□□□ -1.93
CAPN3-211ENST00000562199 FN1P02751 2386 aaKnown RBP3□□□□□ -1.93
CAPN3-211ENST00000562199 UTP20O75691 2785 aaKnown RBP3□□□□□ -1.93
CAPN3-211ENST00000562199 A0A096LNI7 61 aa3□□□□□ -1.93
CAPN3-211ENST00000562199 IGSF10Q6WRI0 2623 aa3□□□□□ -1.93
CAPN3-211ENST00000562199 ZFYVE26Q68DK2 2539 aa2.99□□□□□ -1.93
CAPN3-211ENST00000562199 TEX15Q9BXT5 2789 aa2.99□□□□□ -1.93
CAPN3-211ENST00000562199 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
CAPN3-211ENST00000562199 TP53AIP1Q9HCN2 124 aa2.99□□□□□ -1.93
CAPN3-211ENST00000562199 LRRK2Q5S007 2527 aa2.99□□□□□ -1.93
CAPN3-211ENST00000562199 CUBNO60494 3623 aa2.99□□□□□ -1.93
CAPN3-211ENST00000562199 FAM208BQ5VWN6 2430 aa2.98□□□□□ -1.93
CAPN3-211ENST00000562199 INE1O15225 51 aa2.98□□□□□ -1.93
CAPN3-211ENST00000562199 SONP18583 2426 aaKnown RBP2.98□□□□□ -1.93
CAPN3-211ENST00000562199 FLNCQ14315 2725 aa2.98□□□□□ -1.93
CAPN3-211ENST00000562199 ZNF462Q96JM2 2506 aa2.97□□□□□ -1.93
CAPN3-211ENST00000562199 J3QKU1 62 aa2.97□□□□□ -1.93
CAPN3-211ENST00000562199 KRTAP24-1Q3LI83 254 aa2.97□□□□□ -1.93
CAPN3-211ENST00000562199 C14orf177Q52M58 125 aa2.97□□□□□ -1.93
CAPN3-211ENST00000562199 IGKV2-24A0A0C4DH68 120 aa2.96□□□□□ -1.94
CAPN3-211ENST00000562199 KRTAP13-1Q8IUC0 172 aa2.96□□□□□ -1.94
CAPN3-211ENST00000562199 MAST4O15021 2626 aa2.96□□□□□ -1.94
CAPN3-211ENST00000562199 FLNAP21333 2647 aaKnown RBP2.96□□□□□ -1.94
CAPN3-211ENST00000562199 PCOTHQ58A44 107 aa2.95□□□□□ -1.94
CAPN3-211ENST00000562199 FASNP49327 2511 aaKnown RBP2.95□□□□□ -1.94
CAPN3-211ENST00000562199 APCP25054 2843 aa2.95□□□□□ -1.94
CAPN3-211ENST00000562199 ABCA12Q86UK0 2595 aa2.95□□□□□ -1.94
CAPN3-211ENST00000562199 HIVEP2P31629 2446 aa2.94□□□□□ -1.94
CAPN3-211ENST00000562199 FLNBO75369 2602 aaKnown RBP2.94□□□□□ -1.94
CAPN3-211ENST00000562199 MYO18BQ8IUG5 2567 aa2.94□□□□□ -1.94
CAPN3-211ENST00000562199 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
CAPN3-211ENST00000562199 PDZD2O15018 2839 aa2.94□□□□□ -1.94
CAPN3-211ENST00000562199 TENM4Q6N022 2769 aa2.93□□□□□ -1.94
CAPN3-211ENST00000562199 CCDC168Q8NDH2 2452 aa2.93□□□□□ -1.94
CAPN3-211ENST00000562199 PLAC4Q8WY50 150 aa2.93□□□□□ -1.94
CAPN3-211ENST00000562199 MRPL34Q9BQ48 92 aaKnown RBP2.93□□□□□ -1.94
CAPN3-211ENST00000562199 DNAH3Q8TD57 4116 aa2.92□□□□□ -1.94
CAPN3-211ENST00000562199 HELZ2Q9BYK8 2649 aaKnown RBP2.92□□□□□ -1.94
CAPN3-211ENST00000562199 ANK2Q01484 3957 aa2.92□□□□□ -1.94
CAPN3-211ENST00000562199 NIPBLQ6KC79 2804 aaeCLIP2.9□□□□□ -1.94
CAPN3-211ENST00000562199 HIVEP1P15822 2718 aa2.9□□□□□ -1.95
CAPN3-211ENST00000562199 KRTAP13-3Q3SY46 172 aa2.9□□□□□ -1.95
CAPN3-211ENST00000562199 HUWE1Q7Z6Z7 4374 aaKnown RBP2.9□□□□□ -1.95
CAPN3-211ENST00000562199 NBEAL2Q6ZNJ1 2754 aa2.89□□□□□ -1.95
CAPN3-211ENST00000562199 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
CAPN3-211ENST00000562199 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
CAPN3-211ENST00000562199 UBE2DNLQ8IWF7 75 aa2.89□□□□□ -1.95
CAPN3-211ENST00000562199 UNC79Q9P2D8 2635 aa2.89□□□□□ -1.95
CAPN3-211ENST00000562199 NF1P21359 2839 aa2.88□□□□□ -1.95
CAPN3-211ENST00000562199 HECTD1Q9ULT8 2610 aa2.88□□□□□ -1.95
CAPN3-211ENST00000562199 CRIPTQ9P021 101 aa2.88□□□□□ -1.95
CAPN3-211ENST00000562199 APLNQ9ULZ1 77 aa2.88□□□□□ -1.95
CAPN3-211ENST00000562199 MTORP42345 2549 aa2.88□□□□□ -1.95
CAPN3-211ENST00000562199 DNAH10Q8IVF4 4471 aa2.87□□□□□ -1.95
CAPN3-211ENST00000562199 K7EIL1 84 aa2.87□□□□□ -1.95
CAPN3-211ENST00000562199 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
CAPN3-211ENST00000562199 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
CAPN3-211ENST00000562199 CMYA5Q8N3K9 4069 aa2.87□□□□□ -1.95
CAPN3-211ENST00000562199 DYNC2H1Q8NCM8 4307 aaKnown RBP2.87□□□□□ -1.95
CAPN3-211ENST00000562199 CENPEQ02224 2701 aa2.87□□□□□ -1.95
CAPN3-211ENST00000562199 ACANP16112 2415 aa2.87□□□□□ -1.95
CAPN3-211ENST00000562199 DNAH9Q9NYC9 4486 aa2.86□□□□□ -1.95
CAPN3-211ENST00000562199 SETD2Q9BYW2 2564 aaPredicted RBP2.86□□□□□ -1.95
CAPN3-211ENST00000562199 Q6ZRN7 208 aaPredicted RBP2.86□□□□□ -1.95
CAPN3-211ENST00000562199 NOTCH2Q04721 2471 aa2.86□□□□□ -1.95
CAPN3-211ENST00000562199 VWFP04275 2813 aa2.84□□□□□ -1.95
CAPN3-211ENST00000562199 ALMS1Q8TCU4 4167 aa2.84□□□□□ -1.95
CAPN3-211ENST00000562199 H0YAA0 97 aa2.83□□□□□ -1.96
CAPN3-211ENST00000562199 TRRAPQ9Y4A5 3859 aa2.83□□□□□ -1.96
CAPN3-211ENST00000562199 DNAH17Q9UFH2 4485 aa2.83□□□□□ -1.96
CAPN3-211ENST00000562199 DNAH8Q96JB1 4490 aa2.82□□□□□ -1.96
CAPN3-211ENST00000562199 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
CAPN3-211ENST00000562199 TENM3Q9P273 2699 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms