RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
PCAT1-202ENST00000561978 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
PCAT1-202ENST00000561978 RYR1P21817 5038 aa7.18□□□□□ -1.26
PCAT1-202ENST00000561978 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
PCAT1-202ENST00000561978 HSPG2P98160 4391 aa7.16□□□□□ -1.26
PCAT1-202ENST00000561978 PANO1I0J062 215 aa7.16□□□□□ -1.26
PCAT1-202ENST00000561978 IGKV4-1P06312 121 aa7.16□□□□□ -1.26
PCAT1-202ENST00000561978 MP68P56378 58 aa7.16□□□□□ -1.26
PCAT1-202ENST00000561978 KRTAP10-1P60331 282 aa7.16□□□□□ -1.26
PCAT1-202ENST00000561978 LINC00313P59037 77 aa7.15□□□□□ -1.26
PCAT1-202ENST00000561978 DNAH8Q96JB1 4490 aa7.14□□□□□ -1.27
PCAT1-202ENST00000561978 ATP11AUNQ6ZP68 121 aa7.14□□□□□ -1.27
PCAT1-202ENST00000561978 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
PCAT1-202ENST00000561978 FAM229BQ4G0N7 80 aa7.13□□□□□ -1.27
PCAT1-202ENST00000561978 KRTAP4-7Q9BYR0 210 aa7.13□□□□□ -1.27
PCAT1-202ENST00000561978 A6NN06 94 aa7.13□□□□□ -1.27
PCAT1-202ENST00000561978 Q8N9L7 120 aa7.13□□□□□ -1.27
PCAT1-202ENST00000561978 FAT1Q14517 4588 aa7.12□□□□□ -1.27
PCAT1-202ENST00000561978 PLAC8Q9NZF1 115 aa7.11□□□□□ -1.27
PCAT1-202ENST00000561978 FAM30AQ9NZY2 134 aa7.11□□□□□ -1.27
PCAT1-202ENST00000561978 HERC2O95714 4834 aa7.1□□□□□ -1.27
PCAT1-202ENST00000561978 ZNF706Q9Y5V0 76 aaPredicted RBP7.09□□□□□ -1.27
PCAT1-202ENST00000561978 A0A087WSZ3 146 aa7.08□□□□□ -1.28
PCAT1-202ENST00000561978 DSCR10P59022 87 aa7.08□□□□□ -1.28
PCAT1-202ENST00000561978 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
PCAT1-202ENST00000561978 RPL37AP61513 92 aaKnown RBP7.08□□□□□ -1.28
PCAT1-202ENST00000561978 CDK2AP2O75956 126 aa7.07□□□□□ -1.28
PCAT1-202ENST00000561978 A0A0G2JQZ4 141 aa7.06□□□□□ -1.28
PCAT1-202ENST00000561978 PSORS1C2Q9UIG4 136 aa7.06□□□□□ -1.28
PCAT1-202ENST00000561978 LINC00483Q53H64 154 aa7.06□□□□□ -1.28
PCAT1-202ENST00000561978 Q6ZSA8 131 aa7.06□□□□□ -1.28
PCAT1-202ENST00000561978 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
PCAT1-202ENST00000561978 VPS13BQ7Z7G8 4022 aa7.05□□□□□ -1.28
PCAT1-202ENST00000561978 K7EQZ3 153 aa7.04□□□□□ -1.28
PCAT1-202ENST00000561978 ZNF861PO60384 105 aa7.04□□□□□ -1.28
PCAT1-202ENST00000561978 KRTAP17-1Q9BYP8 105 aa7.04□□□□□ -1.28
PCAT1-202ENST00000561978 SMR3BP02814 79 aaPredicted RBP7.04□□□□□ -1.28
PCAT1-202ENST00000561978 SRRM2Q9UQ35 2752 aaKnown RBP7.03□□□□□ -1.28
PCAT1-202ENST00000561978 Q75L30 129 aa7.02□□□□□ -1.29
PCAT1-202ENST00000561978 CIRBP-AS1Q8TBR5 109 aa7.02□□□□□ -1.29
PCAT1-202ENST00000561978 HCG22E2RYF7 251 aa7.02□□□□□ -1.29
PCAT1-202ENST00000561978 ABCA13Q86UQ4 5058 aa7.02□□□□□ -1.29
PCAT1-202ENST00000561978 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
PCAT1-202ENST00000561978 TMEM254Q8TBM7 123 aa7.01□□□□□ -1.29
PCAT1-202ENST00000561978 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
PCAT1-202ENST00000561978 IGLV9-49A0A0B4J1Y8 123 aa7□□□□□ -1.29
PCAT1-202ENST00000561978 DEFB116Q30KQ4 102 aa7□□□□□ -1.29
PCAT1-202ENST00000561978 LINC00472Q9H8W2 130 aa7□□□□□ -1.29
PCAT1-202ENST00000561978 SNURFQ9Y675 71 aa7□□□□□ -1.29
PCAT1-202ENST00000561978 PCLOQ9Y6V0 5065 aa7□□□□□ -1.29
PCAT1-202ENST00000561978 hDV103S1A0JD37 113 aa6.99□□□□□ -1.29
PCAT1-202ENST00000561978 TRAV22A0A0B4J277 110 aa6.99□□□□□ -1.29
PCAT1-202ENST00000561978 A8MWP4 228 aa6.98□□□□□ -1.29
PCAT1-202ENST00000561978 PSPHP1O15172 72 aa6.98□□□□□ -1.29
PCAT1-202ENST00000561978 IGLV7-43P04211 117 aa6.97□□□□□ -1.29
PCAT1-202ENST00000561978 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
PCAT1-202ENST00000561978 KRTAP4-5Q9BYR2 181 aa6.97□□□□□ -1.29
PCAT1-202ENST00000561978 Q8N1X5 172 aa6.97□□□□□ -1.29
PCAT1-202ENST00000561978 NDUFB1O75438 58 aa6.95□□□□□ -1.3
PCAT1-202ENST00000561978 IGHV6-1A0A0B4J1U7 121 aa6.95□□□□□ -1.3
PCAT1-202ENST00000561978 CYP4F30PQ9H0H9 118 aa6.95□□□□□ -1.3
PCAT1-202ENST00000561978 Q5VSD8 79 aa6.94□□□□□ -1.3
PCAT1-202ENST00000561978 FLG2Q5D862 2391 aaPredicted RBP6.94□□□□□ -1.3
PCAT1-202ENST00000561978 MYCBP2O75592 4640 aa6.93□□□□□ -1.3
PCAT1-202ENST00000561978 MOBPQ13875 183 aa6.93□□□□□ -1.3
PCAT1-202ENST00000561978 SPTSSBQ8NFR3 76 aa6.93□□□□□ -1.3
PCAT1-202ENST00000561978 CASC2Q6XLA1 102 aa6.92□□□□□ -1.3
PCAT1-202ENST00000561978 WFDC13Q8IUB5 93 aa6.92□□□□□ -1.3
PCAT1-202ENST00000561978 KRTAP29-1A8MX34 341 aaPredicted RBP6.91□□□□□ -1.3
PCAT1-202ENST00000561978 Q5VV11 94 aa6.91□□□□□ -1.3
PCAT1-202ENST00000561978 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
PCAT1-202ENST00000561978 NOTCH2NLQ7Z3S9 236 aa6.91□□□□□ -1.3
PCAT1-202ENST00000561978 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
PCAT1-202ENST00000561978 ANAPC11Q9NYG5 84 aa6.89□□□□□ -1.31
PCAT1-202ENST00000561978 SSBP3-AS1Q7Z2R9 100 aa6.89□□□□□ -1.31
PCAT1-202ENST00000561978 Q96NJ1 140 aa6.88□□□□□ -1.31
PCAT1-202ENST00000561978 A8MU10 97 aa6.87□□□□□ -1.31
PCAT1-202ENST00000561978 CDC42SE1Q9NRR8 79 aa6.87□□□□□ -1.31
PCAT1-202ENST00000561978 A0A087X002 238 aa6.86□□□□□ -1.31
PCAT1-202ENST00000561978 H3BPC8 53 aa6.86□□□□□ -1.31
PCAT1-202ENST00000561978 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
PCAT1-202ENST00000561978 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
PCAT1-202ENST00000561978 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
PCAT1-202ENST00000561978 KRTAP4-2Q9BYR5 136 aa6.86□□□□□ -1.31
PCAT1-202ENST00000561978 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
PCAT1-202ENST00000561978 MMP24-AS1A0A0U1RRL7 71 aa6.85□□□□□ -1.31
PCAT1-202ENST00000561978 CHKB-CPT1BH3BT56 60 aa6.85□□□□□ -1.31
PCAT1-202ENST00000561978 A0A1B0GVX0 72 aa6.83□□□□□ -1.32
PCAT1-202ENST00000561978 TP53AIP1Q9HCN2 124 aa6.82□□□□□ -1.32
PCAT1-202ENST00000561978 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
PCAT1-202ENST00000561978 H0Y9P7 68 aa6.8□□□□□ -1.32
PCAT1-202ENST00000561978 C1orf64Q8NEQ6 169 aa6.8□□□□□ -1.32
PCAT1-202ENST00000561978 LINC00208Q96KT6 92 aa6.79□□□□□ -1.32
PCAT1-202ENST00000561978 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
PCAT1-202ENST00000561978 KRTAP4-11Q9BYQ6 195 aa6.78□□□□□ -1.32
PCAT1-202ENST00000561978 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
PCAT1-202ENST00000561978 PKHD1L1Q86WI1 4243 aa6.77□□□□□ -1.33
PCAT1-202ENST00000561978 MRPL34Q9BQ48 92 aaKnown RBP6.76□□□□□ -1.33
PCAT1-202ENST00000561978 RETNLBQ9BQ08 111 aa6.75□□□□□ -1.33
PCAT1-202ENST00000561978 LOC101927531A0A1B0GV80 90 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms