RNA–Protein interactions for RNA: ENST00000561731.1

PTPN9-202, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 3

Gene PTPN9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-202ENST00000561731 PPDPFLQ8WWR9 84 aa1.06□□□□□ -2.24
PTPN9-202ENST00000561731 C8orf17Q9NRJ1 99 aa1.06□□□□□ -2.24
PTPN9-202ENST00000561731 SS18L2Q9UHA2 77 aa1.06□□□□□ -2.24
PTPN9-202ENST00000561731 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
PTPN9-202ENST00000561731 TRAV13-2A0A0B4J235 113 aa1.05□□□□□ -2.24
PTPN9-202ENST00000561731 LST1O00453 97 aa1.05□□□□□ -2.24
PTPN9-202ENST00000561731 LEPROTO15243 131 aa1.05□□□□□ -2.24
PTPN9-202ENST00000561731 COX7BP24311 80 aa1.05□□□□□ -2.24
PTPN9-202ENST00000561731 S100A7L2Q5SY68 101 aa1.05□□□□□ -2.24
PTPN9-202ENST00000561731 TMEM170BQ5T4T1 132 aa1.05□□□□□ -2.24
PTPN9-202ENST00000561731 COMMD7Q86VX2 200 aa1.05□□□□□ -2.24
PTPN9-202ENST00000561731 C18orf32Q8TCD1 76 aa1.05□□□□□ -2.24
PTPN9-202ENST00000561731 A0A1W2PNM2 257 aa1.04□□□□□ -2.24
PTPN9-202ENST00000561731 J3QQQ9 107 aa1.04□□□□□ -2.24
PTPN9-202ENST00000561731 SPINK7P58062 85 aa1.04□□□□□ -2.24
PTPN9-202ENST00000561731 TAL2Q16559 108 aa1.04□□□□□ -2.24
PTPN9-202ENST00000561731 H1FX-AS1Q4G0G2 97 aa1.04□□□□□ -2.24
PTPN9-202ENST00000561731 LINC00308Q8TCZ7 52 aa1.04□□□□□ -2.24
PTPN9-202ENST00000561731 LINC00614P0C842 121 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 LINC00313P59037 77 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 KLKP1Q107X0 134 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 RHEBQ15382 184 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 RGS21Q2M5E4 152 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 OCIAD2Q56VL3 154 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 ADM2Q7Z4H4 148 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 TEN1Q86WV5 123 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 MIEN1Q9BRT3 115 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 LINC00472Q9H8W2 130 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 NHP2Q9NX24 153 aaKnown RBP1.03□□□□□ -2.24
PTPN9-202ENST00000561731 CRIPTQ9P021 101 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
PTPN9-202ENST00000561731 MT-ND4LP03901 98 aa1.02□□□□□ -2.25
PTPN9-202ENST00000561731 FABP9Q0Z7S8 132 aa1.02□□□□□ -2.25
PTPN9-202ENST00000561731 PEA15Q15121 130 aa1.02□□□□□ -2.25
PTPN9-202ENST00000561731 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.02□□□□□ -2.25
PTPN9-202ENST00000561731 LINC00575Q6W349 94 aa1.02□□□□□ -2.25
PTPN9-202ENST00000561731 WFDC13Q8IUB5 93 aa1.02□□□□□ -2.25
PTPN9-202ENST00000561731 RAB37Q96AX2 223 aa1.02□□□□□ -2.25
PTPN9-202ENST00000561731 BATF3Q9NR55 127 aa1.02□□□□□ -2.25
PTPN9-202ENST00000561731 C8orf87E5RJ46 101 aa1.01□□□□□ -2.25
PTPN9-202ENST00000561731 F8WEM9 126 aa1.01□□□□□ -2.25
PTPN9-202ENST00000561731 C3orf79P0CE67 100 aa1.01□□□□□ -2.25
PTPN9-202ENST00000561731 PLNP26678 52 aa1.01□□□□□ -2.25
PTPN9-202ENST00000561731 IFI27L1Q96BM0 104 aa1.01□□□□□ -2.25
PTPN9-202ENST00000561731 CHCHD1Q96BP2 118 aaKnown RBP1.01□□□□□ -2.25
PTPN9-202ENST00000561731 SMCO4Q9NRQ5 59 aa1.01□□□□□ -2.25
PTPN9-202ENST00000561731 PRO2289Q9P1D8 64 aa1.01□□□□□ -2.25
PTPN9-202ENST00000561731 MUC5ACP98088 5654 aa1.01□□□□□ -2.25
PTPN9-202ENST00000561731 A0A087WSZ3 146 aa1□□□□□ -2.25
PTPN9-202ENST00000561731 SMIM26A0A096LP01 95 aa1□□□□□ -2.25
PTPN9-202ENST00000561731 TRBV7-4A0A0J9YYF1 115 aa1□□□□□ -2.25
PTPN9-202ENST00000561731 H0Y8G0 127 aa1□□□□□ -2.25
PTPN9-202ENST00000561731 Q6ZQY7 126 aa1□□□□□ -2.25
PTPN9-202ENST00000561731 DEFB105AQ8NG35 78 aa1□□□□□ -2.25
PTPN9-202ENST00000561731 SEC11CQ9BY50 192 aa1□□□□□ -2.25
PTPN9-202ENST00000561731 A6NDN8 102 aa0.99□□□□□ -2.25
PTPN9-202ENST00000561731 H0YAA0 97 aa0.99□□□□□ -2.25
PTPN9-202ENST00000561731 IFITM1P13164 125 aa0.99□□□□□ -2.25
PTPN9-202ENST00000561731 PMCHL1Q16048 86 aa0.99□□□□□ -2.25
PTPN9-202ENST00000561731 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
PTPN9-202ENST00000561731 SMIM11BQ8TCY0 68 aa0.99□□□□□ -2.25
PTPN9-202ENST00000561731 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
PTPN9-202ENST00000561731 hADV29S1A0JD25 119 aa0.98□□□□□ -2.25
PTPN9-202ENST00000561731 DPM2O94777 84 aa0.98□□□□□ -2.25
PTPN9-202ENST00000561731 IGKCP01834 107 aa0.98□□□□□ -2.25
PTPN9-202ENST00000561731 KRTAP19-7Q3SYF9 63 aa0.98□□□□□ -2.25
PTPN9-202ENST00000561731 LUZP6Q538Z0 58 aa0.98□□□□□ -2.25
PTPN9-202ENST00000561731 PRR15Q8IV56 129 aa0.98□□□□□ -2.25
PTPN9-202ENST00000561731 YPEL4Q96NS1 127 aa0.98□□□□□ -2.25
PTPN9-202ENST00000561731 H3BUT2 72 aa0.97□□□□□ -2.25
PTPN9-202ENST00000561731 NPC2P61916 151 aa0.97□□□□□ -2.25
PTPN9-202ENST00000561731 SLC7A5P1Q8MH63 180 aa0.97□□□□□ -2.25
PTPN9-202ENST00000561731 OR13C6PQ8NH95 151 aa0.97□□□□□ -2.25
PTPN9-202ENST00000561731 COPS9Q8WXC6 57 aa0.97□□□□□ -2.25
PTPN9-202ENST00000561731 IGKV3D-7A0A0C4DH55 119 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 A0A1B0GX51 115 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 K7EQZ3 153 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 LEPROTL1O95214 131 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 MT1EP04732 61 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 MT4P47944 62 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 KRTAP20-2Q3LI61 65 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 LINC01545Q5VT33 79 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 SIGMAR1Q99720 223 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 TRAPPC1Q9Y5R8 145 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 R4GN34 69 aa0.96□□□□□ -2.26
PTPN9-202ENST00000561731 FAM236AA0A1B0GUQ0 79 aa0.95□□□□□ -2.26
PTPN9-202ENST00000561731 FAM236BA0A1B0GV22 79 aa0.95□□□□□ -2.26
PTPN9-202ENST00000561731 TMEM218A2RU14 115 aa0.95□□□□□ -2.26
PTPN9-202ENST00000561731 BVES-AS1Q5T3Y7 98 aa0.95□□□□□ -2.26
PTPN9-202ENST00000561731 CSAG1Q6PB30 78 aa0.95□□□□□ -2.26
PTPN9-202ENST00000561731 C2orf91Q6ZV80 131 aa0.95□□□□□ -2.26
PTPN9-202ENST00000561731 LCA10Q71F78 164 aa0.95□□□□□ -2.26
PTPN9-202ENST00000561731 DSCR8Q96T75 97 aa0.95□□□□□ -2.26
PTPN9-202ENST00000561731 IGHV6-1A0A0B4J1U7 121 aa0.94□□□□□ -2.26
PTPN9-202ENST00000561731 J3KT08 172 aa0.94□□□□□ -2.26
PTPN9-202ENST00000561731 MT1GP13640 62 aa0.94□□□□□ -2.26
PTPN9-202ENST00000561731 S100PP25815 95 aa0.94□□□□□ -2.26
PTPN9-202ENST00000561731 VAMP3Q15836 100 aa0.94□□□□□ -2.26
PTPN9-202ENST00000561731 C7orf65Q6ZTY9 151 aa0.94□□□□□ -2.26
PTPN9-202ENST00000561731 IMUPQ9GZP8 106 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms