RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 COX6B2Q6YFQ2 88 aa9.83□□□□□ -0.84
COMMD4-204ENST00000561662 SSPOA2VEC9 5147 aa9.82□□□□□ -0.84
COMMD4-204ENST00000561662 CCKP06307 115 aa9.82□□□□□ -0.84
COMMD4-204ENST00000561662 USH2AO75445 5202 aa9.82□□□□□ -0.84
COMMD4-204ENST00000561662 TRBV7-7A0A0K0K1E9 115 aa9.81□□□□□ -0.84
COMMD4-204ENST00000561662 HRCT1Q6UXD1 115 aa9.81□□□□□ -0.84
COMMD4-204ENST00000561662 C21orf62-AS1Q17RA5 79 aa9.78□□□□□ -0.84
COMMD4-204ENST00000561662 Q5XG85 94 aa9.78□□□□□ -0.84
COMMD4-204ENST00000561662 A0A1B0GW54 56 aa9.76□□□□□ -0.85
COMMD4-204ENST00000561662 VPS25Q9BRG1 176 aa9.75□□□□□ -0.85
COMMD4-204ENST00000561662 A0A087WSZ3 146 aa9.74□□□□□ -0.85
COMMD4-204ENST00000561662 LIMD2Q9BT23 127 aa9.7□□□□□ -0.86
COMMD4-204ENST00000561662 FCGBPQ9Y6R7 5405 aaPredicted RBP9.68□□□□□ -0.86
COMMD4-204ENST00000561662 Q96NJ1 140 aa9.66□□□□□ -0.86
COMMD4-204ENST00000561662 SS18L2Q9UHA2 77 aa9.66□□□□□ -0.86
COMMD4-204ENST00000561662 FAM240AA0A1B0GVK7 77 aa9.65□□□□□ -0.86
COMMD4-204ENST00000561662 C1orf195Q5TG92 126 aa9.65□□□□□ -0.86
COMMD4-204ENST00000561662 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
COMMD4-204ENST00000561662 LINC00472Q9H8W2 130 aa9.64□□□□□ -0.87
COMMD4-204ENST00000561662 ACYP1P07311 99 aa9.62□□□□□ -0.87
COMMD4-204ENST00000561662 RPL37P61927 97 aaKnown RBP9.6□□□□□ -0.87
COMMD4-204ENST00000561662 Q6ZVQ6 151 aa9.59□□□□□ -0.87
COMMD4-204ENST00000561662 NREPQ16612 68 aa9.58□□□□□ -0.88
COMMD4-204ENST00000561662 J3QR89 54 aa9.57□□□□□ -0.88
COMMD4-204ENST00000561662 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
COMMD4-204ENST00000561662 UBL5Q9BZL1 73 aa9.54□□□□□ -0.88
COMMD4-204ENST00000561662 KRTAP9-8Q9BYQ0 159 aa9.53□□□□□ -0.88
COMMD4-204ENST00000561662 K7ERU9 68 aa9.52□□□□□ -0.89
COMMD4-204ENST00000561662 KRTAP19-1Q8IUB9 90 aa9.51□□□□□ -0.89
COMMD4-204ENST00000561662 J3KT08 172 aa9.5□□□□□ -0.89
COMMD4-204ENST00000561662 IGKV4-1P06312 121 aa9.5□□□□□ -0.89
COMMD4-204ENST00000561662 DSCR10P59022 87 aa9.49□□□□□ -0.89
COMMD4-204ENST00000561662 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
COMMD4-204ENST00000561662 BPY2O14599 106 aa9.46□□□□□ -0.9
COMMD4-204ENST00000561662 A8MWP4 228 aa9.44□□□□□ -0.9
COMMD4-204ENST00000561662 LINC00643Q86TS7 51 aa9.44□□□□□ -0.9
COMMD4-204ENST00000561662 IGKV3D-7A0A0C4DH55 119 aa9.43□□□□□ -0.9
COMMD4-204ENST00000561662 CXCL6P80162 114 aa9.43□□□□□ -0.9
COMMD4-204ENST00000561662 A0A1B0GVX0 72 aa9.41□□□□□ -0.9
COMMD4-204ENST00000561662 SYNE2Q8WXH0 6885 aaKnown RBP9.41□□□□□ -0.9
COMMD4-204ENST00000561662 ATP5EP2Q5VTU8 51 aa9.4□□□□□ -0.9
COMMD4-204ENST00000561662 PRR15Q8IV56 129 aa9.4□□□□□ -0.9
COMMD4-204ENST00000561662 K7EQZ3 153 aa9.39□□□□□ -0.91
COMMD4-204ENST00000561662 LCE2BO14633 110 aa9.39□□□□□ -0.91
COMMD4-204ENST00000561662 MACF1Q9UPN3 7388 aaKnown RBP9.39□□□□□ -0.91
COMMD4-204ENST00000561662 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
COMMD4-204ENST00000561662 Q8N9L7 120 aa9.38□□□□□ -0.91
COMMD4-204ENST00000561662 NDUFB1O75438 58 aa9.37□□□□□ -0.91
COMMD4-204ENST00000561662 IGHV6-1A0A0B4J1U7 121 aa9.36□□□□□ -0.91
COMMD4-204ENST00000561662 MT2AP02795 61 aa9.34□□□□□ -0.91
COMMD4-204ENST00000561662 C8orf87E5RJ46 101 aa9.33□□□□□ -0.92
COMMD4-204ENST00000561662 KRTAP16-1A8MUX0 517 aa9.32□□□□□ -0.92
COMMD4-204ENST00000561662 LINC00313P59037 77 aa9.32□□□□□ -0.92
COMMD4-204ENST00000561662 C8orf17Q9NRJ1 99 aa9.32□□□□□ -0.92
COMMD4-204ENST00000561662 MMP24-AS1A0A0U1RRL7 71 aa9.31□□□□□ -0.92
COMMD4-204ENST00000561662 ATP11AUNQ6ZP68 121 aa9.31□□□□□ -0.92
COMMD4-204ENST00000561662 MT1FP04733 61 aa9.29□□□□□ -0.92
COMMD4-204ENST00000561662 MT-ATP8P03928 68 aa9.28□□□□□ -0.92
COMMD4-204ENST00000561662 KRTAP9-3Q9BYQ3 159 aa9.25□□□□□ -0.93
COMMD4-204ENST00000561662 Q75L30 129 aa9.23□□□□□ -0.93
COMMD4-204ENST00000561662 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
COMMD4-204ENST00000561662 HCG22E2RYF7 251 aa9.22□□□□□ -0.93
COMMD4-204ENST00000561662 KRTAP10-10P60014 251 aa9.22□□□□□ -0.93
COMMD4-204ENST00000561662 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
COMMD4-204ENST00000561662 TMEM254Q8TBM7 123 aa9.22□□□□□ -0.93
COMMD4-204ENST00000561662 A0A087WVE0 104 aa9.21□□□□□ -0.94
COMMD4-204ENST00000561662 hDV103S1A0JD37 113 aa9.21□□□□□ -0.94
COMMD4-204ENST00000561662 A8MUU9 505 aa9.21□□□□□ -0.94
COMMD4-204ENST00000561662 IMUPQ9GZP8 106 aa9.21□□□□□ -0.94
COMMD4-204ENST00000561662 CASC2Q6XLA1 102 aa9.2□□□□□ -0.94
COMMD4-204ENST00000561662 Q8N9P0 234 aaPredicted RBP9.2□□□□□ -0.94
COMMD4-204ENST00000561662 WFDC13Q8IUB5 93 aa9.19□□□□□ -0.94
COMMD4-204ENST00000561662 MRPL34Q9BQ48 92 aaKnown RBP9.19□□□□□ -0.94
COMMD4-204ENST00000561662 FAM236DA0A1B0GTK5 79 aa9.1□□□□□ -0.95
COMMD4-204ENST00000561662 FAM236CP0DP71 79 aa9.1□□□□□ -0.95
COMMD4-204ENST00000561662 KRTAP19-6Q3LI70 58 aa9.1□□□□□ -0.95
COMMD4-204ENST00000561662 KRTAP6-3Q3LI67 103 aa9.08□□□□□ -0.96
COMMD4-204ENST00000561662 NDUFS5O43920 106 aa9.03□□□□□ -0.96
COMMD4-204ENST00000561662 ZCCHC13Q8WW36 166 aaKnown RBP9.02□□□□□ -0.97
COMMD4-204ENST00000561662 FAM236AA0A1B0GUQ0 79 aa9.01□□□□□ -0.97
COMMD4-204ENST00000561662 FAM236BA0A1B0GV22 79 aa9.01□□□□□ -0.97
COMMD4-204ENST00000561662 Q5W150 140 aa9.01□□□□□ -0.97
COMMD4-204ENST00000561662 OCR1Q9BZK8 76 aa9□□□□□ -0.97
COMMD4-204ENST00000561662 TP53AIP1Q9HCN2 124 aa9□□□□□ -0.97
COMMD4-204ENST00000561662 UQCRQO14949 82 aa8.94□□□□□ -0.98
COMMD4-204ENST00000561662 SCGB1A1P11684 91 aa8.93□□□□□ -0.98
COMMD4-204ENST00000561662 HRES1P13985 223 aa8.9□□□□□ -0.98
COMMD4-204ENST00000561662 RBM12B-AS1Q9P1G2 102 aa8.9□□□□□ -0.98
COMMD4-204ENST00000561662 NEBP20929 6669 aa8.89□□□□□ -0.99
COMMD4-204ENST00000561662 ATOX1O00244 68 aa8.89□□□□□ -0.99
COMMD4-204ENST00000561662 MPLKIPQ8TAP9 179 aa8.89□□□□□ -0.99
COMMD4-204ENST00000561662 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
COMMD4-204ENST00000561662 SMIM20Q8N5G0 67 aa8.87□□□□□ -0.99
COMMD4-204ENST00000561662 TRAV7A0A075B6U4 112 aa8.86□□□□□ -0.99
COMMD4-204ENST00000561662 MUC12Q9UKN1 5478 aa8.86□□□□□ -0.99
COMMD4-204ENST00000561662 SPINK7P58062 85 aa8.83□□□□□ -1
COMMD4-204ENST00000561662 C5orf47Q569G3 176 aa8.83□□□□□ -1
COMMD4-204ENST00000561662 H0Y9P7 68 aa8.82□□□□□ -1
COMMD4-204ENST00000561662 IGKV2-30P06310 120 aa8.82□□□□□ -1
COMMD4-204ENST00000561662 SERP2Q8N6R1 65 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms