RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 RBM3P98179 157 aaKnown RBP5.5□□□□□ -1.53
HERC1-212ENST00000561348 DSCR8Q96T75 97 aa5.5□□□□□ -1.53
HERC1-212ENST00000561348 DEFB116Q30KQ4 102 aa5.49□□□□□ -1.53
HERC1-212ENST00000561348 Q6Q795 121 aa5.49□□□□□ -1.53
HERC1-212ENST00000561348 SCGB1A1P11684 91 aa5.48□□□□□ -1.53
HERC1-212ENST00000561348 Q96NJ1 140 aa5.48□□□□□ -1.53
HERC1-212ENST00000561348 KRTAP4-12Q9BQ66 201 aa5.48□□□□□ -1.53
HERC1-212ENST00000561348 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
HERC1-212ENST00000561348 KRTAP4-1Q9BYQ7 146 aa5.47□□□□□ -1.53
HERC1-212ENST00000561348 MUC17Q685J3 4493 aa5.46□□□□□ -1.54
HERC1-212ENST00000561348 TRBV7-4A0A0J9YYF1 115 aa5.46□□□□□ -1.54
HERC1-212ENST00000561348 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
HERC1-212ENST00000561348 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
HERC1-212ENST00000561348 RPL37P61927 97 aaKnown RBP5.45□□□□□ -1.54
HERC1-212ENST00000561348 DSCR10P59022 87 aa5.44□□□□□ -1.54
HERC1-212ENST00000561348 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
HERC1-212ENST00000561348 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
HERC1-212ENST00000561348 FAM240AA0A1B0GVK7 77 aa5.42□□□□□ -1.54
HERC1-212ENST00000561348 ATP11AUNQ6ZP68 121 aa5.42□□□□□ -1.54
HERC1-212ENST00000561348 C14orf132Q9NPU4 83 aa5.42□□□□□ -1.54
HERC1-212ENST00000561348 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
HERC1-212ENST00000561348 JMJD7-PLA2G4BH0Y9G9 81 aa5.41□□□□□ -1.54
HERC1-212ENST00000561348 ACYP1P07311 99 aa5.41□□□□□ -1.54
HERC1-212ENST00000561348 MT-ATP8P03928 68 aa5.4□□□□□ -1.54
HERC1-212ENST00000561348 LINC00313P59037 77 aa5.39□□□□□ -1.55
HERC1-212ENST00000561348 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
HERC1-212ENST00000561348 Q6ZQT0 140 aa5.37□□□□□ -1.55
HERC1-212ENST00000561348 Q75L30 129 aa5.37□□□□□ -1.55
HERC1-212ENST00000561348 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
HERC1-212ENST00000561348 LOC110117498A0A087WWA1 95 aa5.35□□□□□ -1.55
HERC1-212ENST00000561348 PDE6GP18545 87 aa5.35□□□□□ -1.55
HERC1-212ENST00000561348 NOTCH2NLQ7Z3S9 236 aa5.35□□□□□ -1.55
HERC1-212ENST00000561348 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.55
HERC1-212ENST00000561348 NDUFB1O75438 58 aa5.34□□□□□ -1.55
HERC1-212ENST00000561348 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
HERC1-212ENST00000561348 J3KT08 172 aa5.33□□□□□ -1.56
HERC1-212ENST00000561348 NREPQ16612 68 aa5.33□□□□□ -1.56
HERC1-212ENST00000561348 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
HERC1-212ENST00000561348 A8MUU9 505 aa5.32□□□□□ -1.56
HERC1-212ENST00000561348 LINC00643Q86TS7 51 aa5.32□□□□□ -1.56
HERC1-212ENST00000561348 C20orf166-AS1Q96NR2 134 aa5.32□□□□□ -1.56
HERC1-212ENST00000561348 C8orf87E5RJ46 101 aa5.3□□□□□ -1.56
HERC1-212ENST00000561348 IMUPQ9GZP8 106 aa5.3□□□□□ -1.56
HERC1-212ENST00000561348 A0A1B0GW54 56 aa5.28□□□□□ -1.56
HERC1-212ENST00000561348 KRTAP16-1A8MUX0 517 aa5.28□□□□□ -1.56
HERC1-212ENST00000561348 M0R2T5 61 aa5.28□□□□□ -1.56
HERC1-212ENST00000561348 A8MWP4 228 aa5.27□□□□□ -1.57
HERC1-212ENST00000561348 ANAPC13Q9BS18 74 aa5.27□□□□□ -1.57
HERC1-212ENST00000561348 IGKV3D-7A0A0C4DH55 119 aa5.25□□□□□ -1.57
HERC1-212ENST00000561348 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
HERC1-212ENST00000561348 C8orf17Q9NRJ1 99 aa5.25□□□□□ -1.57
HERC1-212ENST00000561348 FAM236DA0A1B0GTK5 79 aa5.24□□□□□ -1.57
HERC1-212ENST00000561348 FAM236CP0DP71 79 aa5.24□□□□□ -1.57
HERC1-212ENST00000561348 LINC00846Q9NV44 126 aa5.24□□□□□ -1.57
HERC1-212ENST00000561348 BPY2O14599 106 aa5.23□□□□□ -1.57
HERC1-212ENST00000561348 NDUFS5O43920 106 aa5.23□□□□□ -1.57
HERC1-212ENST00000561348 MT1HP80294 61 aa5.23□□□□□ -1.57
HERC1-212ENST00000561348 ATP5EP2Q5VTU8 51 aa5.22□□□□□ -1.57
HERC1-212ENST00000561348 PRR15Q8IV56 129 aa5.22□□□□□ -1.57
HERC1-212ENST00000561348 K7EQZ3 153 aa5.21□□□□□ -1.58
HERC1-212ENST00000561348 Q6ZVQ6 151 aa5.21□□□□□ -1.58
HERC1-212ENST00000561348 UBL5Q9BZL1 73 aa5.21□□□□□ -1.58
HERC1-212ENST00000561348 FAM236AA0A1B0GUQ0 79 aa5.2□□□□□ -1.58
HERC1-212ENST00000561348 FAM236BA0A1B0GV22 79 aa5.2□□□□□ -1.58
HERC1-212ENST00000561348 Q8N9L7 120 aa5.2□□□□□ -1.58
HERC1-212ENST00000561348 ZCCHC13Q8WW36 166 aaKnown RBP5.2□□□□□ -1.58
HERC1-212ENST00000561348 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
HERC1-212ENST00000561348 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
HERC1-212ENST00000561348 hDV103S1A0JD37 113 aa5.18□□□□□ -1.58
HERC1-212ENST00000561348 WFDC13Q8IUB5 93 aa5.18□□□□□ -1.58
HERC1-212ENST00000561348 MMP24-AS1A0A0U1RRL7 71 aa5.17□□□□□ -1.58
HERC1-212ENST00000561348 ATOX1O00244 68 aa5.17□□□□□ -1.58
HERC1-212ENST00000561348 HIST1H4AP62805 103 aaKnown RBP5.17□□□□□ -1.58
HERC1-212ENST00000561348 MRPL34Q9BQ48 92 aaKnown RBP5.17□□□□□ -1.58
HERC1-212ENST00000561348 RBM12B-AS1Q9P1G2 102 aa5.17□□□□□ -1.58
HERC1-212ENST00000561348 Q8N9P0 234 aaPredicted RBP5.16□□□□□ -1.58
HERC1-212ENST00000561348 TMEM254Q8TBM7 123 aa5.16□□□□□ -1.58
HERC1-212ENST00000561348 SPINK7P58062 85 aa5.15□□□□□ -1.59
HERC1-212ENST00000561348 CCDC179H3BU77 68 aa5.14□□□□□ -1.59
HERC1-212ENST00000561348 CASC2Q6XLA1 102 aa5.14□□□□□ -1.59
HERC1-212ENST00000561348 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
HERC1-212ENST00000561348 A0A087WVE0 104 aa5.12□□□□□ -1.59
HERC1-212ENST00000561348 UQCRQO14949 82 aa5.12□□□□□ -1.59
HERC1-212ENST00000561348 HRES1P13985 223 aa5.12□□□□□ -1.59
HERC1-212ENST00000561348 CXCL6P80162 114 aa5.12□□□□□ -1.59
HERC1-212ENST00000561348 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
HERC1-212ENST00000561348 HCG22E2RYF7 251 aa5.11□□□□□ -1.59
HERC1-212ENST00000561348 COX7CP15954 63 aa5.11□□□□□ -1.59
HERC1-212ENST00000561348 KRTAP10-6P60371 365 aaPredicted RBP5.11□□□□□ -1.59
HERC1-212ENST00000561348 KRTAP3-1Q9BYR8 98 aa5.1□□□□□ -1.59
HERC1-212ENST00000561348 IGKV2D-30A0A075B6S6 120 aa5.09□□□□□ -1.59
HERC1-212ENST00000561348 IGKV2-30P06310 120 aa5.09□□□□□ -1.59
HERC1-212ENST00000561348 SERP2Q8N6R1 65 aa5.08□□□□□ -1.6
HERC1-212ENST00000561348 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
HERC1-212ENST00000561348 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
HERC1-212ENST00000561348 Q5W150 140 aa5.05□□□□□ -1.6
HERC1-212ENST00000561348 SMIM20Q8N5G0 67 aa5.05□□□□□ -1.6
HERC1-212ENST00000561348 FLGP20930 4061 aaPredicted RBP5.04□□□□□ -1.6
HERC1-212ENST00000561348 MPLKIPQ8TAP9 179 aa5.04□□□□□ -1.6
HERC1-212ENST00000561348 TRAV7A0A075B6U4 112 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms