RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 PSMB2P49721 201 aa3.32□□□□□ -1.88
LRRC28-220ENST00000561253 BATFQ16520 125 aa3.32□□□□□ -1.88
LRRC28-220ENST00000561253 COX6CP09669 75 aa3.31□□□□□ -1.88
LRRC28-220ENST00000561253 CD164Q04900 197 aa3.31□□□□□ -1.88
LRRC28-220ENST00000561253 C9orf153Q5TBE3 101 aa3.31□□□□□ -1.88
LRRC28-220ENST00000561253 Q5XG85 94 aa3.31□□□□□ -1.88
LRRC28-220ENST00000561253 IGFL1Q6UW32 110 aa3.31□□□□□ -1.88
LRRC28-220ENST00000561253 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
LRRC28-220ENST00000561253 A0A1W2PPM0 123 aa3.3□□□□□ -1.88
LRRC28-220ENST00000561253 H3BUT2 72 aa3.3□□□□□ -1.88
LRRC28-220ENST00000561253 ORMDL1Q9P0S3 153 aa3.3□□□□□ -1.88
LRRC28-220ENST00000561253 SCGB1C2P0DMR2 95 aa3.29□□□□□ -1.88
LRRC28-220ENST00000561253 Q6JHZ5 121 aa3.29□□□□□ -1.88
LRRC28-220ENST00000561253 Q6Q795 121 aa3.29□□□□□ -1.88
LRRC28-220ENST00000561253 RETNLBQ9BQ08 111 aa3.29□□□□□ -1.88
LRRC28-220ENST00000561253 TRBV20-1A0A075B6N2 111 aa3.28□□□□□ -1.88
LRRC28-220ENST00000561253 A0A1W2PNM2 257 aa3.28□□□□□ -1.88
LRRC28-220ENST00000561253 H3BMG7 143 aa3.28□□□□□ -1.88
LRRC28-220ENST00000561253 H3BQ85 93 aa3.28□□□□□ -1.88
LRRC28-220ENST00000561253 TMEM256-PLSCR3K7ERE1 68 aa3.28□□□□□ -1.88
LRRC28-220ENST00000561253 DNAL4O96015 105 aa3.28□□□□□ -1.88
LRRC28-220ENST00000561253 ATXN8Q156A1 80 aa3.28□□□□□ -1.88
LRRC28-220ENST00000561253 COL5A1-AS1Q5SY13 56 aa3.28□□□□□ -1.88
LRRC28-220ENST00000561253 TRBV7-4A0A0J9YYF1 115 aa3.27□□□□□ -1.89
LRRC28-220ENST00000561253 TRBV7-7A0A0K0K1E9 115 aa3.27□□□□□ -1.89
LRRC28-220ENST00000561253 F8WEM9 126 aa3.27□□□□□ -1.89
LRRC28-220ENST00000561253 SNCGO76070 127 aa3.27□□□□□ -1.89
LRRC28-220ENST00000561253 BAALC-AS2P0C853 105 aa3.27□□□□□ -1.89
LRRC28-220ENST00000561253 FABP2P12104 132 aa3.27□□□□□ -1.89
LRRC28-220ENST00000561253 FP248Q71RG6 208 aaPredicted RBP3.27□□□□□ -1.89
LRRC28-220ENST00000561253 OBSCN-AS1Q96MR7 158 aa3.27□□□□□ -1.89
LRRC28-220ENST00000561253 TPRXLQ17RH7 258 aa3.26□□□□□ -1.89
LRRC28-220ENST00000561253 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
LRRC28-220ENST00000561253 ASB16-AS1Q495Z4 193 aa3.26□□□□□ -1.89
LRRC28-220ENST00000561253 C1orf195Q5TG92 126 aa3.26□□□□□ -1.89
LRRC28-220ENST00000561253 LYRM7Q5U5X0 104 aa3.26□□□□□ -1.89
LRRC28-220ENST00000561253 HRCT1Q6UXD1 115 aa3.26□□□□□ -1.89
LRRC28-220ENST00000561253 ANKRD29Q8N6D5 301 aa3.25□□□□□ -1.89
LRRC28-220ENST00000561253 C9JAW5 83 aa3.24□□□□□ -1.89
LRRC28-220ENST00000561253 H3BT86 120 aa3.24□□□□□ -1.89
LRRC28-220ENST00000561253 TEN1Q86WV5 123 aa3.24□□□□□ -1.89
LRRC28-220ENST00000561253 Q96NJ1 140 aa3.24□□□□□ -1.89
LRRC28-220ENST00000561253 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
LRRC28-220ENST00000561253 SPCS1Q9Y6A9 102 aa3.24□□□□□ -1.89
LRRC28-220ENST00000561253 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
LRRC28-220ENST00000561253 A0A1B0GV72 72 aa3.23□□□□□ -1.89
LRRC28-220ENST00000561253 K7EP34 96 aa3.23□□□□□ -1.89
LRRC28-220ENST00000561253 Q6ZQT0 140 aa3.23□□□□□ -1.89
LRRC28-220ENST00000561253 A0A087WSZ3 146 aa3.22□□□□□ -1.89
LRRC28-220ENST00000561253 LOC110117498A0A087WWA1 95 aa3.22□□□□□ -1.89
LRRC28-220ENST00000561253 RBM3P98179 157 aaKnown RBP3.22□□□□□ -1.89
LRRC28-220ENST00000561253 JMJD7-PLA2G4BH0Y9G9 81 aa3.21□□□□□ -1.9
LRRC28-220ENST00000561253 CCKP06307 115 aa3.21□□□□□ -1.9
LRRC28-220ENST00000561253 LINC00472Q9H8W2 130 aa3.21□□□□□ -1.9
LRRC28-220ENST00000561253 C14orf132Q9NPU4 83 aa3.2□□□□□ -1.9
LRRC28-220ENST00000561253 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
LRRC28-220ENST00000561253 DSCR8Q96T75 97 aa3.19□□□□□ -1.9
LRRC28-220ENST00000561253 SS18L2Q9UHA2 77 aa3.19□□□□□ -1.9
LRRC28-220ENST00000561253 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
LRRC28-220ENST00000561253 A0A1B0GW54 56 aa3.18□□□□□ -1.9
LRRC28-220ENST00000561253 PDE6GP18545 87 aa3.18□□□□□ -1.9
LRRC28-220ENST00000561253 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
LRRC28-220ENST00000561253 F8W1H4 67 aa3.16□□□□□ -1.9
LRRC28-220ENST00000561253 GTF2H5Q6ZYL4 71 aa3.16□□□□□ -1.9
LRRC28-220ENST00000561253 C9orf92A6NGG3 77 aa3.15□□□□□ -1.91
LRRC28-220ENST00000561253 A0A1B0GV90 55 aa3.14□□□□□ -1.91
LRRC28-220ENST00000561253 ETDBQ3ZM63 59 aa3.14□□□□□ -1.91
LRRC28-220ENST00000561253 VPS25Q9BRG1 176 aa3.14□□□□□ -1.91
LRRC28-220ENST00000561253 IGKV4-1P06312 121 aa3.13□□□□□ -1.91
LRRC28-220ENST00000561253 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
LRRC28-220ENST00000561253 C20orf166-AS1Q96NR2 134 aa3.13□□□□□ -1.91
LRRC28-220ENST00000561253 IGKV3D-7A0A0C4DH55 119 aa3.12□□□□□ -1.91
LRRC28-220ENST00000561253 A8MUU9 505 aa3.12□□□□□ -1.91
LRRC28-220ENST00000561253 SIGMAR1Q99720 223 aa3.12□□□□□ -1.91
LRRC28-220ENST00000561253 LINC00846Q9NV44 126 aa3.12□□□□□ -1.91
LRRC28-220ENST00000561253 A0A1B0GVX0 72 aa3.11□□□□□ -1.91
LRRC28-220ENST00000561253 A8MWP4 228 aa3.11□□□□□ -1.91
LRRC28-220ENST00000561253 J3KT08 172 aa3.11□□□□□ -1.91
LRRC28-220ENST00000561253 NREPQ16612 68 aa3.1□□□□□ -1.91
LRRC28-220ENST00000561253 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
LRRC28-220ENST00000561253 PCOTHQ58A44 107 aa3.1□□□□□ -1.91
LRRC28-220ENST00000561253 LINC00313P59037 77 aa3.09□□□□□ -1.91
LRRC28-220ENST00000561253 PRR15Q8IV56 129 aa3.09□□□□□ -1.91
LRRC28-220ENST00000561253 IGHV6-1A0A0B4J1U7 121 aa3.08□□□□□ -1.92
LRRC28-220ENST00000561253 MMP24-AS1A0A0U1RRL7 71 aa3.08□□□□□ -1.92
LRRC28-220ENST00000561253 C8orf87E5RJ46 101 aa3.08□□□□□ -1.92
LRRC28-220ENST00000561253 K7EQZ3 153 aa3.08□□□□□ -1.92
LRRC28-220ENST00000561253 FAM240AA0A1B0GVK7 77 aa3.07□□□□□ -1.92
LRRC28-220ENST00000561253 C8orf17Q9NRJ1 99 aa3.07□□□□□ -1.92
LRRC28-220ENST00000561253 BPY2O14599 106 aa3.06□□□□□ -1.92
LRRC28-220ENST00000561253 C5orf47Q569G3 176 aa3.05□□□□□ -1.92
LRRC28-220ENST00000561253 UBL5Q9BZL1 73 aa3.05□□□□□ -1.92
LRRC28-220ENST00000561253 NDUFB1O75438 58 aa3.04□□□□□ -1.92
LRRC28-220ENST00000561253 ACYP1P07311 99 aa3.03□□□□□ -1.92
LRRC28-220ENST00000561253 TMEM254Q8TBM7 123 aa3.03□□□□□ -1.92
LRRC28-220ENST00000561253 hDV103S1A0JD37 113 aa3.02□□□□□ -1.93
LRRC28-220ENST00000561253 ATP11AUNQ6ZP68 121 aa3.02□□□□□ -1.93
LRRC28-220ENST00000561253 MRPL34Q9BQ48 92 aaKnown RBP3.02□□□□□ -1.93
LRRC28-220ENST00000561253 Q5W150 140 aa3.01□□□□□ -1.93
LRRC28-220ENST00000561253 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms