RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 Q75L30 129 aa5.17□□□□□ -1.58
RABGGTA-221ENST00000561055 C20orf166-AS1Q96NR2 134 aa5.16□□□□□ -1.58
RABGGTA-221ENST00000561055 A0A1B0GVX0 72 aa5.15□□□□□ -1.59
RABGGTA-221ENST00000561055 A8MUU9 505 aa5.15□□□□□ -1.59
RABGGTA-221ENST00000561055 LINC00313P59037 77 aa5.15□□□□□ -1.59
RABGGTA-221ENST00000561055 NREPQ16612 68 aa5.15□□□□□ -1.59
RABGGTA-221ENST00000561055 KRTAP16-1A8MUX0 517 aa5.14□□□□□ -1.59
RABGGTA-221ENST00000561055 C8orf87E5RJ46 101 aa5.14□□□□□ -1.59
RABGGTA-221ENST00000561055 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
RABGGTA-221ENST00000561055 KRTAP4-1Q9BYQ7 146 aa5.14□□□□□ -1.59
RABGGTA-221ENST00000561055 A8MWP4 228 aa5.13□□□□□ -1.59
RABGGTA-221ENST00000561055 DSCR10P59022 87 aa5.13□□□□□ -1.59
RABGGTA-221ENST00000561055 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
RABGGTA-221ENST00000561055 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
RABGGTA-221ENST00000561055 NDUFB1O75438 58 aa5.12□□□□□ -1.59
RABGGTA-221ENST00000561055 ETDBQ3ZM63 59 aa5.12□□□□□ -1.59
RABGGTA-221ENST00000561055 IGHV6-1A0A0B4J1U7 121 aa5.11□□□□□ -1.59
RABGGTA-221ENST00000561055 Q6ZVQ6 151 aa5.11□□□□□ -1.59
RABGGTA-221ENST00000561055 IGKV3D-7A0A0C4DH55 119 aa5.1□□□□□ -1.59
RABGGTA-221ENST00000561055 A0A0U1RQV1 116 aa5.1□□□□□ -1.59
RABGGTA-221ENST00000561055 ATP11AUNQ6ZP68 121 aa5.1□□□□□ -1.59
RABGGTA-221ENST00000561055 PRR15Q8IV56 129 aa5.1□□□□□ -1.59
RABGGTA-221ENST00000561055 LINC00846Q9NV44 126 aa5.09□□□□□ -1.59
RABGGTA-221ENST00000561055 A0A1B0GV90 55 aa5.08□□□□□ -1.6
RABGGTA-221ENST00000561055 BPY2O14599 106 aa5.07□□□□□ -1.6
RABGGTA-221ENST00000561055 Q8N9P0 234 aaPredicted RBP5.07□□□□□ -1.6
RABGGTA-221ENST00000561055 UBL5Q9BZL1 73 aa5.07□□□□□ -1.6
RABGGTA-221ENST00000561055 C8orf17Q9NRJ1 99 aa5.07□□□□□ -1.6
RABGGTA-221ENST00000561055 K7EQZ3 153 aa5.04□□□□□ -1.6
RABGGTA-221ENST00000561055 MMP24-AS1A0A0U1RRL7 71 aa5.03□□□□□ -1.6
RABGGTA-221ENST00000561055 FAM240AA0A1B0GVK7 77 aa5.03□□□□□ -1.6
RABGGTA-221ENST00000561055 ACYP1P07311 99 aa5.03□□□□□ -1.6
RABGGTA-221ENST00000561055 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
RABGGTA-221ENST00000561055 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
RABGGTA-221ENST00000561055 TMEM254Q8TBM7 123 aa5.02□□□□□ -1.61
RABGGTA-221ENST00000561055 MRPL34Q9BQ48 92 aaKnown RBP5.01□□□□□ -1.61
RABGGTA-221ENST00000561055 hDV103S1A0JD37 113 aa5□□□□□ -1.61
RABGGTA-221ENST00000561055 CXCL6P80162 114 aa5□□□□□ -1.61
RABGGTA-221ENST00000561055 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
RABGGTA-221ENST00000561055 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
RABGGTA-221ENST00000561055 ZCCHC13Q8WW36 166 aaKnown RBP4.99□□□□□ -1.61
RABGGTA-221ENST00000561055 Q8N9L7 120 aa4.98□□□□□ -1.61
RABGGTA-221ENST00000561055 CASC2Q6XLA1 102 aa4.96□□□□□ -1.62
RABGGTA-221ENST00000561055 HCG22E2RYF7 251 aa4.94□□□□□ -1.62
RABGGTA-221ENST00000561055 WFDC13Q8IUB5 93 aa4.94□□□□□ -1.62
RABGGTA-221ENST00000561055 ATP5EP2Q5VTU8 51 aa4.93□□□□□ -1.62
RABGGTA-221ENST00000561055 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
RABGGTA-221ENST00000561055 NDUFS5O43920 106 aa4.91□□□□□ -1.62
RABGGTA-221ENST00000561055 HRES1P13985 223 aa4.91□□□□□ -1.62
RABGGTA-221ENST00000561055 SPINK7P58062 85 aa4.91□□□□□ -1.62
RABGGTA-221ENST00000561055 LINC00643Q86TS7 51 aa4.91□□□□□ -1.62
RABGGTA-221ENST00000561055 J3QR89 54 aa4.9□□□□□ -1.63
RABGGTA-221ENST00000561055 MT1HP80294 61 aa4.9□□□□□ -1.63
RABGGTA-221ENST00000561055 Q5W150 140 aa4.88□□□□□ -1.63
RABGGTA-221ENST00000561055 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
RABGGTA-221ENST00000561055 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
RABGGTA-221ENST00000561055 TP53AIP1Q9HCN2 124 aa4.87□□□□□ -1.63
RABGGTA-221ENST00000561055 RBM12B-AS1Q9P1G2 102 aa4.86□□□□□ -1.63
RABGGTA-221ENST00000561055 CRCT1Q9UGL9 99 aa4.84□□□□□ -1.63
RABGGTA-221ENST00000561055 HIST1H4AP62805 103 aaKnown RBP4.83□□□□□ -1.64
RABGGTA-221ENST00000561055 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
RABGGTA-221ENST00000561055 C7orf65Q6ZTY9 151 aa4.82□□□□□ -1.64
RABGGTA-221ENST00000561055 K7ERU9 68 aa4.8□□□□□ -1.64
RABGGTA-221ENST00000561055 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
RABGGTA-221ENST00000561055 A0A087WVE0 104 aa4.79□□□□□ -1.64
RABGGTA-221ENST00000561055 FAM236DA0A1B0GTK5 79 aa4.79□□□□□ -1.64
RABGGTA-221ENST00000561055 IGKV2-30P06310 120 aa4.79□□□□□ -1.64
RABGGTA-221ENST00000561055 FAM236CP0DP71 79 aa4.79□□□□□ -1.64
RABGGTA-221ENST00000561055 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
RABGGTA-221ENST00000561055 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
RABGGTA-221ENST00000561055 M0R2T5 61 aa4.77□□□□□ -1.65
RABGGTA-221ENST00000561055 UQCRQO14949 82 aa4.77□□□□□ -1.65
RABGGTA-221ENST00000561055 TRAV22A0A0B4J277 110 aa4.76□□□□□ -1.65
RABGGTA-221ENST00000561055 IMUPQ9GZP8 106 aa4.76□□□□□ -1.65
RABGGTA-221ENST00000561055 OCR1Q9BZK8 76 aa4.73□□□□□ -1.65
RABGGTA-221ENST00000561055 CYP4F30PQ9H0H9 118 aa4.73□□□□□ -1.65
RABGGTA-221ENST00000561055 ATOX1O00244 68 aa4.72□□□□□ -1.65
RABGGTA-221ENST00000561055 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
RABGGTA-221ENST00000561055 LOC101927531A0A1B0GV80 90 aa4.71□□□□□ -1.66
RABGGTA-221ENST00000561055 C4orf26Q17RF5 130 aa4.71□□□□□ -1.66
RABGGTA-221ENST00000561055 MT-ATP8P03928 68 aa4.7□□□□□ -1.66
RABGGTA-221ENST00000561055 H0Y9P7 68 aa4.69□□□□□ -1.66
RABGGTA-221ENST00000561055 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
RABGGTA-221ENST00000561055 C5orf47Q569G3 176 aa4.68□□□□□ -1.66
RABGGTA-221ENST00000561055 KRTAP3-1Q9BYR8 98 aa4.68□□□□□ -1.66
RABGGTA-221ENST00000561055 C1orf64Q8NEQ6 169 aa4.66□□□□□ -1.66
RABGGTA-221ENST00000561055 H3BPC8 53 aa4.65□□□□□ -1.67
RABGGTA-221ENST00000561055 SCGB1A1P11684 91 aa4.65□□□□□ -1.67
RABGGTA-221ENST00000561055 MP68P56378 58 aa4.65□□□□□ -1.67
RABGGTA-221ENST00000561055 LINC00208Q96KT6 92 aa4.64□□□□□ -1.67
RABGGTA-221ENST00000561055 USH2AO75445 5202 aa4.64□□□□□ -1.67
RABGGTA-221ENST00000561055 SMIM20Q8N5G0 67 aa4.63□□□□□ -1.67
RABGGTA-221ENST00000561055 FAM236AA0A1B0GUQ0 79 aa4.61□□□□□ -1.67
RABGGTA-221ENST00000561055 FAM236BA0A1B0GV22 79 aa4.61□□□□□ -1.67
RABGGTA-221ENST00000561055 MT2AP02795 61 aa4.61□□□□□ -1.67
RABGGTA-221ENST00000561055 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
RABGGTA-221ENST00000561055 TRAV7A0A075B6U4 112 aa4.6□□□□□ -1.67
RABGGTA-221ENST00000561055 KLKP1Q107X0 134 aa4.6□□□□□ -1.67
RABGGTA-221ENST00000561055 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
RABGGTA-221ENST00000561055 A8MUN3 132 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms