RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
SNX1-213ENST00000561026 A0A1B0GVX0 72 aa8.05□□□□□ -1.12
SNX1-213ENST00000561026 DSCR8Q96T75 97 aa8.04□□□□□ -1.12
SNX1-213ENST00000561026 UQCR10Q9UDW1 63 aa8.04□□□□□ -1.12
SNX1-213ENST00000561026 SCGB1C2P0DMR2 95 aa8.03□□□□□ -1.12
SNX1-213ENST00000561026 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
SNX1-213ENST00000561026 MT1FP04733 61 aa8.02□□□□□ -1.13
SNX1-213ENST00000561026 J3KT08 172 aa7.99□□□□□ -1.13
SNX1-213ENST00000561026 BAALC-AS2P0C853 105 aa7.99□□□□□ -1.13
SNX1-213ENST00000561026 C9JAW5 83 aa7.98□□□□□ -1.13
SNX1-213ENST00000561026 KRTAP10-10P60014 251 aa7.98□□□□□ -1.13
SNX1-213ENST00000561026 C21orf62-AS1Q17RA5 79 aa7.98□□□□□ -1.13
SNX1-213ENST00000561026 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
SNX1-213ENST00000561026 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
SNX1-213ENST00000561026 Q6ZQT0 140 aa7.97□□□□□ -1.13
SNX1-213ENST00000561026 MTURNQ8N3F0 131 aa7.97□□□□□ -1.13
SNX1-213ENST00000561026 KRTAP9-7A8MTY7 169 aa7.97□□□□□ -1.13
SNX1-213ENST00000561026 SPINK7P58062 85 aa7.97□□□□□ -1.13
SNX1-213ENST00000561026 Q8N9P0 234 aaPredicted RBP7.94□□□□□ -1.14
SNX1-213ENST00000561026 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
SNX1-213ENST00000561026 NDUFB1O75438 58 aa7.93□□□□□ -1.14
SNX1-213ENST00000561026 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
SNX1-213ENST00000561026 TMA7Q9Y2S6 64 aaKnown RBP7.89□□□□□ -1.15
SNX1-213ENST00000561026 A0A1B0GW54 56 aa7.88□□□□□ -1.15
SNX1-213ENST00000561026 A8MWP4 228 aa7.88□□□□□ -1.15
SNX1-213ENST00000561026 JMJD7-PLA2G4BH0Y9G9 81 aa7.88□□□□□ -1.15
SNX1-213ENST00000561026 C8orf17Q9NRJ1 99 aa7.88□□□□□ -1.15
SNX1-213ENST00000561026 LOC110117498A0A087WWA1 95 aa7.87□□□□□ -1.15
SNX1-213ENST00000561026 ATXN8Q156A1 80 aa7.87□□□□□ -1.15
SNX1-213ENST00000561026 LYRM7Q5U5X0 104 aa7.86□□□□□ -1.15
SNX1-213ENST00000561026 IGKV3D-7A0A0C4DH55 119 aa7.85□□□□□ -1.15
SNX1-213ENST00000561026 PDE6GP18545 87 aa7.84□□□□□ -1.15
SNX1-213ENST00000561026 WFDC13Q8IUB5 93 aa7.84□□□□□ -1.16
SNX1-213ENST00000561026 NAA38Q9BRA0 125 aaKnown RBP7.84□□□□□ -1.16
SNX1-213ENST00000561026 Q6ZVQ6 151 aa7.83□□□□□ -1.16
SNX1-213ENST00000561026 M0R143 59 aa7.82□□□□□ -1.16
SNX1-213ENST00000561026 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
SNX1-213ENST00000561026 C14orf132Q9NPU4 83 aa7.81□□□□□ -1.16
SNX1-213ENST00000561026 PRR15Q8IV56 129 aa7.8□□□□□ -1.16
SNX1-213ENST00000561026 MACF1Q9UPN3 7388 aaKnown RBP7.77□□□□□ -1.16
SNX1-213ENST00000561026 NREPQ16612 68 aa7.77□□□□□ -1.17
SNX1-213ENST00000561026 SYNE2Q8WXH0 6885 aaKnown RBP7.75□□□□□ -1.17
SNX1-213ENST00000561026 MRPL34Q9BQ48 92 aaKnown RBP7.74□□□□□ -1.17
SNX1-213ENST00000561026 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
SNX1-213ENST00000561026 TMEM254Q8TBM7 123 aa7.73□□□□□ -1.17
SNX1-213ENST00000561026 KRTAP19-6Q3LI70 58 aa7.72□□□□□ -1.17
SNX1-213ENST00000561026 LINC00846Q9NV44 126 aa7.71□□□□□ -1.17
SNX1-213ENST00000561026 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
SNX1-213ENST00000561026 H1FX-AS1Q4G0G2 97 aa7.69□□□□□ -1.18
SNX1-213ENST00000561026 K7EQZ3 153 aa7.68□□□□□ -1.18
SNX1-213ENST00000561026 NDUFS5O43920 106 aa7.67□□□□□ -1.18
SNX1-213ENST00000561026 SMIM6P0DI80 62 aa7.63□□□□□ -1.19
SNX1-213ENST00000561026 BATFQ16520 125 aa7.62□□□□□ -1.19
SNX1-213ENST00000561026 IGKV2D-30A0A075B6S6 120 aa7.61□□□□□ -1.19
SNX1-213ENST00000561026 H3BT86 120 aa7.61□□□□□ -1.19
SNX1-213ENST00000561026 BPY2O14599 106 aa7.61□□□□□ -1.19
SNX1-213ENST00000561026 IGKV2-30P06310 120 aa7.61□□□□□ -1.19
SNX1-213ENST00000561026 Q5W150 140 aa7.61□□□□□ -1.19
SNX1-213ENST00000561026 C7orf65Q6ZTY9 151 aa7.59□□□□□ -1.19
SNX1-213ENST00000561026 C9orf118A6NHY6 69 aa7.58□□□□□ -1.2
SNX1-213ENST00000561026 TSTD3H0UI37 97 aa7.58□□□□□ -1.2
SNX1-213ENST00000561026 A0A1W2PPM0 123 aa7.56□□□□□ -1.2
SNX1-213ENST00000561026 TAX1BP3O14907 124 aa7.54□□□□□ -1.2
SNX1-213ENST00000561026 CASC2Q6XLA1 102 aa7.54□□□□□ -1.2
SNX1-213ENST00000561026 Q8N9L7 120 aa7.54□□□□□ -1.2
SNX1-213ENST00000561026 HCG22E2RYF7 251 aa7.52□□□□□ -1.21
SNX1-213ENST00000561026 C4orf26Q17RF5 130 aa7.51□□□□□ -1.21
SNX1-213ENST00000561026 CXCL6P80162 114 aa7.48□□□□□ -1.21
SNX1-213ENST00000561026 KRTAP6-3Q3LI67 103 aa7.45□□□□□ -1.22
SNX1-213ENST00000561026 C5orf47Q569G3 176 aa7.43□□□□□ -1.22
SNX1-213ENST00000561026 SPCS1Q9Y6A9 102 aa7.43□□□□□ -1.22
SNX1-213ENST00000561026 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
SNX1-213ENST00000561026 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
SNX1-213ENST00000561026 FAM236AA0A1B0GUQ0 79 aa7.37□□□□□ -1.23
SNX1-213ENST00000561026 FAM236BA0A1B0GV22 79 aa7.37□□□□□ -1.23
SNX1-213ENST00000561026 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
SNX1-213ENST00000561026 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
SNX1-213ENST00000561026 LOC105371267A0A1B0GV96 52 aa7.35□□□□□ -1.23
SNX1-213ENST00000561026 S4R3F8 94 aa7.35□□□□□ -1.23
SNX1-213ENST00000561026 CSAG1Q6PB30 78 aa7.34□□□□□ -1.23
SNX1-213ENST00000561026 C1orf64Q8NEQ6 169 aa7.34□□□□□ -1.23
SNX1-213ENST00000561026 PRO0461Q9UI25 63 aa7.34□□□□□ -1.23
SNX1-213ENST00000561026 LCA10Q71F78 164 aa7.33□□□□□ -1.24
SNX1-213ENST00000561026 MT1BP07438 61 aa7.32□□□□□ -1.24
SNX1-213ENST00000561026 SPRR2GQ9BYE4 73 aa7.31□□□□□ -1.24
SNX1-213ENST00000561026 A6NN06 94 aa7.3□□□□□ -1.24
SNX1-213ENST00000561026 Q5VV11 94 aa7.3□□□□□ -1.24
SNX1-213ENST00000561026 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
SNX1-213ENST00000561026 TP53AIP1Q9HCN2 124 aa7.29□□□□□ -1.24
SNX1-213ENST00000561026 COL5A1-AS1Q5SY13 56 aa7.27□□□□□ -1.25
SNX1-213ENST00000561026 NEBP20929 6669 aa7.27□□□□□ -1.25
SNX1-213ENST00000561026 K7EP34 96 aa7.26□□□□□ -1.25
SNX1-213ENST00000561026 KLKP1Q107X0 134 aa7.21□□□□□ -1.25
SNX1-213ENST00000561026 KRTAP10-5P60370 271 aa7.19□□□□□ -1.26
SNX1-213ENST00000561026 CYP4F30PQ9H0H9 118 aa7.19□□□□□ -1.26
SNX1-213ENST00000561026 MUC12Q9UKN1 5478 aa7.17□□□□□ -1.26
SNX1-213ENST00000561026 GTF2H5Q6ZYL4 71 aa7.15□□□□□ -1.26
SNX1-213ENST00000561026 F8W1H4 67 aa7.14□□□□□ -1.27
SNX1-213ENST00000561026 ETDBQ3ZM63 59 aa7.13□□□□□ -1.27
SNX1-213ENST00000561026 A0A087WVE0 104 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms