RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
PBX1-219ENST00000560641 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
PBX1-219ENST00000560641 RETNLBQ9BQ08 111 aa9.35□□□□□ -0.91
PBX1-219ENST00000560641 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
PBX1-219ENST00000560641 FBN1P35555 2871 aaKnown RBP9.33□□□□□ -0.92
PBX1-219ENST00000560641 IGLV5-52A0A0A0MRZ9 124 aa9.32□□□□□ -0.92
PBX1-219ENST00000560641 Q6ZRN7 208 aaPredicted RBP9.32□□□□□ -0.92
PBX1-219ENST00000560641 ATRQ13535 2644 aa9.31□□□□□ -0.92
PBX1-219ENST00000560641 APLNQ9ULZ1 77 aa9.31□□□□□ -0.92
PBX1-219ENST00000560641 DNAH8Q96JB1 4490 aa9.3□□□□□ -0.92
PBX1-219ENST00000560641 J3QKU1 62 aa9.3□□□□□ -0.92
PBX1-219ENST00000560641 ZNF861PO60384 105 aa9.29□□□□□ -0.92
PBX1-219ENST00000560641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.29□□□□□ -0.92
PBX1-219ENST00000560641 HECTD1Q9ULT8 2610 aa9.26□□□□□ -0.93
PBX1-219ENST00000560641 PSORS1C2Q9UIG4 136 aa9.25□□□□□ -0.93
PBX1-219ENST00000560641 IGLV7-43P04211 117 aa9.24□□□□□ -0.93
PBX1-219ENST00000560641 H3BS24 57 aa9.24□□□□□ -0.93
PBX1-219ENST00000560641 CSAG1Q6PB30 78 aa9.24□□□□□ -0.93
PBX1-219ENST00000560641 UBE2DNLQ8IWF7 75 aa9.23□□□□□ -0.93
PBX1-219ENST00000560641 SSBP3-AS1Q7Z2R9 100 aa9.22□□□□□ -0.93
PBX1-219ENST00000560641 MAST4O15021 2626 aa9.22□□□□□ -0.93
PBX1-219ENST00000560641 NBDYA0A0U1RRE5 68 aa9.21□□□□□ -0.94
PBX1-219ENST00000560641 KRTAP16-1A8MUX0 517 aa9.2□□□□□ -0.94
PBX1-219ENST00000560641 FRAS1Q86XX4 4008 aa9.2□□□□□ -0.94
PBX1-219ENST00000560641 HECTD4Q9Y4D8 3996 aa9.18□□□□□ -0.94
PBX1-219ENST00000560641 FLNBO75369 2602 aaKnown RBP9.18□□□□□ -0.94
PBX1-219ENST00000560641 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
PBX1-219ENST00000560641 SPINK6Q6UWN8 80 aa9.18□□□□□ -0.94
PBX1-219ENST00000560641 ANAPC11Q9NYG5 84 aa9.16□□□□□ -0.94
PBX1-219ENST00000560641 FASNP49327 2511 aaKnown RBP9.16□□□□□ -0.94
PBX1-219ENST00000560641 KRTAP24-1Q3LI83 254 aa9.16□□□□□ -0.94
PBX1-219ENST00000560641 DNAH7Q8WXX0 4024 aa9.15□□□□□ -0.94
PBX1-219ENST00000560641 HELZ2Q9BYK8 2649 aaKnown RBP9.14□□□□□ -0.95
PBX1-219ENST00000560641 DNAH17Q9UFH2 4485 aa9.1□□□□□ -0.95
PBX1-219ENST00000560641 VPS13DQ5THJ4 4388 aa9.1□□□□□ -0.95
PBX1-219ENST00000560641 A8MUU9 505 aa9.09□□□□□ -0.95
PBX1-219ENST00000560641 PRKDCP78527 4128 aaKnown RBP9.09□□□□□ -0.95
PBX1-219ENST00000560641 A0A087WTM6 91 aa9.09□□□□□ -0.96
PBX1-219ENST00000560641 LY6G6CO95867 125 aa9.09□□□□□ -0.96
PBX1-219ENST00000560641 CIRBP-AS1Q8TBR5 109 aa9.09□□□□□ -0.96
PBX1-219ENST00000560641 COL7A1Q02388 2944 aa9.05□□□□□ -0.96
PBX1-219ENST00000560641 KRTAP25-1Q3LHN0 102 aa9.05□□□□□ -0.96
PBX1-219ENST00000560641 PLECQ15149 4684 aaKnown RBP9.04□□□□□ -0.96
PBX1-219ENST00000560641 H0YAA0 97 aa8.98□□□□□ -0.97
PBX1-219ENST00000560641 NUPR2A6NF83 97 aa8.97□□□□□ -0.97
PBX1-219ENST00000560641 Q6ZSA8 131 aa8.97□□□□□ -0.97
PBX1-219ENST00000560641 C1orf134Q5TEV5 83 aa8.96□□□□□ -0.97
PBX1-219ENST00000560641 ROMO1P60602 79 aa8.96□□□□□ -0.98
PBX1-219ENST00000560641 LINC00304Q8N9R0 145 aa8.95□□□□□ -0.98
PBX1-219ENST00000560641 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
PBX1-219ENST00000560641 NBEAL1Q6ZS30 2694 aa8.93□□□□□ -0.98
PBX1-219ENST00000560641 DNAH6Q9C0G6 4158 aa8.9□□□□□ -0.98
PBX1-219ENST00000560641 DNAH2Q9P225 4427 aa8.87□□□□□ -0.99
PBX1-219ENST00000560641 MEGF8Q7Z7M0 2845 aa8.84□□□□□ -0.99
PBX1-219ENST00000560641 FBN3Q75N90 2809 aa8.83□□□□□ -1
PBX1-219ENST00000560641 NOTCH1P46531 2555 aa8.82□□□□□ -1
PBX1-219ENST00000560641 A0A1B0GU33 70 aa8.82□□□□□ -1
PBX1-219ENST00000560641 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
PBX1-219ENST00000560641 STAB1Q9NY15 2570 aa8.82□□□□□ -1
PBX1-219ENST00000560641 DNAH11Q96DT5 4516 aa8.81□□□□□ -1
PBX1-219ENST00000560641 STAB2Q8WWQ8 2551 aa8.81□□□□□ -1
PBX1-219ENST00000560641 COL6A5A8TX70 2615 aa8.8□□□□□ -1
PBX1-219ENST00000560641 STARD9Q9P2P6 4700 aa8.79□□□□□ -1
PBX1-219ENST00000560641 TYMSOSQ8TAI1 123 aa8.78□□□□□ -1
PBX1-219ENST00000560641 SPINK1P00995 79 aa8.78□□□□□ -1
PBX1-219ENST00000560641 Q8N1X5 172 aa8.77□□□□□ -1.01
PBX1-219ENST00000560641 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1.01
PBX1-219ENST00000560641 RPS29P62273 56 aaKnown RBP8.75□□□□□ -1.01
PBX1-219ENST00000560641 DNAH5Q8TE73 4624 aa8.71□□□□□ -1.02
PBX1-219ENST00000560641 KRTAP3-1Q9BYR8 98 aa8.69□□□□□ -1.02
PBX1-219ENST00000560641 KMT2AQ03164 3969 aa8.69□□□□□ -1.02
PBX1-219ENST00000560641 K7ERS5 55 aa8.67□□□□□ -1.02
PBX1-219ENST00000560641 P0C880 135 aa8.67□□□□□ -1.02
PBX1-219ENST00000560641 C20orf166-AS1Q96NR2 134 aa8.64□□□□□ -1.03
PBX1-219ENST00000560641 TGP01266 2768 aa8.64□□□□□ -1.03
PBX1-219ENST00000560641 COX6B2Q6YFQ2 88 aa8.59□□□□□ -1.03
PBX1-219ENST00000560641 SACSQ9NZJ4 4579 aa8.58□□□□□ -1.04
PBX1-219ENST00000560641 LRP1BQ9NZR2 4599 aa8.55□□□□□ -1.04
PBX1-219ENST00000560641 PKD1P98161 4303 aa8.54□□□□□ -1.04
PBX1-219ENST00000560641 KRTAP10-2P60368 255 aa8.52□□□□□ -1.04
PBX1-219ENST00000560641 VPS13BQ7Z7G8 4022 aa8.5□□□□□ -1.05
PBX1-219ENST00000560641 RPL37P61927 97 aaKnown RBP8.48□□□□□ -1.05
PBX1-219ENST00000560641 PKHD1L1Q86WI1 4243 aa8.46□□□□□ -1.06
PBX1-219ENST00000560641 KRTAP10-1P60331 282 aa8.45□□□□□ -1.06
PBX1-219ENST00000560641 TPRXLQ17RH7 258 aa8.43□□□□□ -1.06
PBX1-219ENST00000560641 KRTAP10-6P60371 365 aaPredicted RBP8.42□□□□□ -1.06
PBX1-219ENST00000560641 KRTAP15-1Q3LI76 137 aa8.42□□□□□ -1.06
PBX1-219ENST00000560641 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
PBX1-219ENST00000560641 MGAM2Q2M2H8 2515 aa8.41□□□□□ -1.06
PBX1-219ENST00000560641 FAT2Q9NYQ8 4349 aa8.39□□□□□ -1.07
PBX1-219ENST00000560641 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
PBX1-219ENST00000560641 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
PBX1-219ENST00000560641 SPINT4Q6UDR6 99 aa8.33□□□□□ -1.08
PBX1-219ENST00000560641 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
PBX1-219ENST00000560641 PKHD1P08F94 4074 aa8.3□□□□□ -1.08
PBX1-219ENST00000560641 C9orf92A6NGG3 77 aa8.28□□□□□ -1.08
PBX1-219ENST00000560641 FLG2Q5D862 2391 aaPredicted RBP8.24□□□□□ -1.09
PBX1-219ENST00000560641 APOBP04114 4563 aaKnown RBP8.21□□□□□ -1.1
PBX1-219ENST00000560641 NDUFAF8A1L188 74 aa8.19□□□□□ -1.1
PBX1-219ENST00000560641 S4R3F8 94 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms