RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 ZNF706Q9Y5V0 76 aaPredicted RBP6.35□□□□□ -1.39
KNSTRN-209ENST00000560220 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
KNSTRN-209ENST00000560220 KRTAP11-1Q8IUC1 163 aa6.34□□□□□ -1.39
KNSTRN-209ENST00000560220 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
KNSTRN-209ENST00000560220 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
KNSTRN-209ENST00000560220 H7BZZ5 65 aa6.33□□□□□ -1.4
KNSTRN-209ENST00000560220 DSCR10P59022 87 aa6.33□□□□□ -1.4
KNSTRN-209ENST00000560220 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
KNSTRN-209ENST00000560220 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
KNSTRN-209ENST00000560220 SNURFQ9Y675 71 aa6.31□□□□□ -1.4
KNSTRN-209ENST00000560220 KRTAP13-1Q8IUC0 172 aa6.3□□□□□ -1.4
KNSTRN-209ENST00000560220 TMEM254Q8TBM7 123 aa6.3□□□□□ -1.4
KNSTRN-209ENST00000560220 PSORS1C2Q9UIG4 136 aa6.29□□□□□ -1.4
KNSTRN-209ENST00000560220 ZNF861PO60384 105 aa6.28□□□□□ -1.4
KNSTRN-209ENST00000560220 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
KNSTRN-209ENST00000560220 A0A087WSZ3 146 aa6.27□□□□□ -1.41
KNSTRN-209ENST00000560220 A0A0G2JQZ4 141 aa6.27□□□□□ -1.41
KNSTRN-209ENST00000560220 K7EQZ3 153 aa6.27□□□□□ -1.41
KNSTRN-209ENST00000560220 SERP1Q9Y6X1 66 aa6.27□□□□□ -1.41
KNSTRN-209ENST00000560220 HCG22E2RYF7 251 aa6.26□□□□□ -1.41
KNSTRN-209ENST00000560220 IGLV7-43P04211 117 aa6.25□□□□□ -1.41
KNSTRN-209ENST00000560220 PRR4Q16378 134 aa6.24□□□□□ -1.41
KNSTRN-209ENST00000560220 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
KNSTRN-209ENST00000560220 C5orf47Q569G3 176 aa6.23□□□□□ -1.41
KNSTRN-209ENST00000560220 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
KNSTRN-209ENST00000560220 LINC00472Q9H8W2 130 aa6.22□□□□□ -1.41
KNSTRN-209ENST00000560220 A8MWP4 228 aa6.21□□□□□ -1.42
KNSTRN-209ENST00000560220 DEFB116Q30KQ4 102 aa6.21□□□□□ -1.42
KNSTRN-209ENST00000560220 SVIPQ8NHG7 77 aa6.21□□□□□ -1.42
KNSTRN-209ENST00000560220 PRR15Q8IV56 129 aa6.2□□□□□ -1.42
KNSTRN-209ENST00000560220 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
KNSTRN-209ENST00000560220 ZCCHC13Q8WW36 166 aaKnown RBP6.18□□□□□ -1.42
KNSTRN-209ENST00000560220 CASC2Q6XLA1 102 aa6.17□□□□□ -1.42
KNSTRN-209ENST00000560220 WFDC13Q8IUB5 93 aa6.17□□□□□ -1.42
KNSTRN-209ENST00000560220 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
KNSTRN-209ENST00000560220 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
KNSTRN-209ENST00000560220 IGLV9-49A0A0B4J1Y8 123 aa6.16□□□□□ -1.42
KNSTRN-209ENST00000560220 NDUFB1O75438 58 aa6.16□□□□□ -1.42
KNSTRN-209ENST00000560220 USH2AO75445 5202 aa6.15□□□□□ -1.42
KNSTRN-209ENST00000560220 MP68P56378 58 aa6.15□□□□□ -1.42
KNSTRN-209ENST00000560220 H3BPC8 53 aa6.14□□□□□ -1.43
KNSTRN-209ENST00000560220 FAM229BQ4G0N7 80 aa6.14□□□□□ -1.43
KNSTRN-209ENST00000560220 Q5XG85 94 aa6.14□□□□□ -1.43
KNSTRN-209ENST00000560220 SSBP3-AS1Q7Z2R9 100 aa6.14□□□□□ -1.43
KNSTRN-209ENST00000560220 MOBPQ13875 183 aa6.12□□□□□ -1.43
KNSTRN-209ENST00000560220 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
KNSTRN-209ENST00000560220 CD164Q04900 197 aa6.11□□□□□ -1.43
KNSTRN-209ENST00000560220 Q96NJ1 140 aa6.11□□□□□ -1.43
KNSTRN-209ENST00000560220 MMP24-AS1A0A0U1RRL7 71 aa6.1□□□□□ -1.43
KNSTRN-209ENST00000560220 hDV103S1A0JD37 113 aa6.09□□□□□ -1.43
KNSTRN-209ENST00000560220 H0Y9P7 68 aa6.09□□□□□ -1.43
KNSTRN-209ENST00000560220 C4orf26Q17RF5 130 aa6.09□□□□□ -1.43
KNSTRN-209ENST00000560220 ASB16-AS1Q495Z4 193 aa6.08□□□□□ -1.44
KNSTRN-209ENST00000560220 TP53AIP1Q9HCN2 124 aa6.08□□□□□ -1.44
KNSTRN-209ENST00000560220 TRAV22A0A0B4J277 110 aa6.07□□□□□ -1.44
KNSTRN-209ENST00000560220 HRCT1Q6UXD1 115 aa6.07□□□□□ -1.44
KNSTRN-209ENST00000560220 FP248Q71RG6 208 aaPredicted RBP6.07□□□□□ -1.44
KNSTRN-209ENST00000560220 LINC00208Q96KT6 92 aa6.07□□□□□ -1.44
KNSTRN-209ENST00000560220 CYP4F30PQ9H0H9 118 aa6.07□□□□□ -1.44
KNSTRN-209ENST00000560220 A0A1B0GVX0 72 aa6.06□□□□□ -1.44
KNSTRN-209ENST00000560220 C8orf17Q9NRJ1 99 aa6.06□□□□□ -1.44
KNSTRN-209ENST00000560220 ANAPC11Q9NYG5 84 aa6.06□□□□□ -1.44
KNSTRN-209ENST00000560220 NEBP20929 6669 aa6.06□□□□□ -1.44
KNSTRN-209ENST00000560220 C4orf48Q5BLP8 95 aa6.05□□□□□ -1.44
KNSTRN-209ENST00000560220 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
KNSTRN-209ENST00000560220 KRTAP20-1Q3LI63 56 aa6.04□□□□□ -1.44
KNSTRN-209ENST00000560220 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
KNSTRN-209ENST00000560220 LIMD2Q9BT23 127 aa6.02□□□□□ -1.45
KNSTRN-209ENST00000560220 IGHV6-1A0A0B4J1U7 121 aa6.01□□□□□ -1.45
KNSTRN-209ENST00000560220 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
KNSTRN-209ENST00000560220 TYMSOSQ8TAI1 123 aa6.01□□□□□ -1.45
KNSTRN-209ENST00000560220 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
KNSTRN-209ENST00000560220 MRPL34Q9BQ48 92 aaKnown RBP6□□□□□ -1.45
KNSTRN-209ENST00000560220 KRTAP1-4P0C5Y4 121 aa5.99□□□□□ -1.45
KNSTRN-209ENST00000560220 A0A087X002 238 aa5.98□□□□□ -1.45
KNSTRN-209ENST00000560220 SPINK1P00995 79 aa5.98□□□□□ -1.45
KNSTRN-209ENST00000560220 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
KNSTRN-209ENST00000560220 C8orf87E5RJ46 101 aa5.96□□□□□ -1.46
KNSTRN-209ENST00000560220 NDUFS5O43920 106 aa5.96□□□□□ -1.46
KNSTRN-209ENST00000560220 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
KNSTRN-209ENST00000560220 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.46
KNSTRN-209ENST00000560220 MPLKIPQ8TAP9 179 aa5.96□□□□□ -1.46
KNSTRN-209ENST00000560220 Q1T7F1 81 aa5.95□□□□□ -1.46
KNSTRN-209ENST00000560220 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
KNSTRN-209ENST00000560220 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
KNSTRN-209ENST00000560220 NOTCH2NLQ7Z3S9 236 aa5.93□□□□□ -1.46
KNSTRN-209ENST00000560220 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
KNSTRN-209ENST00000560220 PRR26Q8N8Z3 221 aa5.92□□□□□ -1.46
KNSTRN-209ENST00000560220 V9GYY9 64 aa5.92□□□□□ -1.46
KNSTRN-209ENST00000560220 MT1HP80294 61 aa5.91□□□□□ -1.46
KNSTRN-209ENST00000560220 LOC101927531A0A1B0GV80 90 aa5.9□□□□□ -1.46
KNSTRN-209ENST00000560220 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
KNSTRN-209ENST00000560220 PRO0628Q9UI54 55 aa5.89□□□□□ -1.47
KNSTRN-209ENST00000560220 LINC00313P59037 77 aa5.88□□□□□ -1.47
KNSTRN-209ENST00000560220 PCOTHQ58A44 107 aa5.88□□□□□ -1.47
KNSTRN-209ENST00000560220 C1orf195Q5TG92 126 aa5.88□□□□□ -1.47
KNSTRN-209ENST00000560220 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
KNSTRN-209ENST00000560220 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
KNSTRN-209ENST00000560220 Q5W150 140 aa5.85□□□□□ -1.47
KNSTRN-209ENST00000560220 COA5Q86WW8 74 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms