RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SPCS1Q9Y6A9 102 aa4.29□□□□□ -1.72
SNX1-207ENST00000559401 K7EP34 96 aa4.28□□□□□ -1.72
SNX1-207ENST00000559401 C21orf62-AS1Q17RA5 79 aa4.27□□□□□ -1.73
SNX1-207ENST00000559401 LINC00472Q9H8W2 130 aa4.27□□□□□ -1.73
SNX1-207ENST00000559401 JMJD7-PLA2G4BH0Y9G9 81 aa4.26□□□□□ -1.73
SNX1-207ENST00000559401 A0A1B0GVX0 72 aa4.25□□□□□ -1.73
SNX1-207ENST00000559401 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
SNX1-207ENST00000559401 KRTAP16-1A8MUX0 517 aa4.24□□□□□ -1.73
SNX1-207ENST00000559401 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
SNX1-207ENST00000559401 F8W1H4 67 aa4.24□□□□□ -1.73
SNX1-207ENST00000559401 J3KT08 172 aa4.24□□□□□ -1.73
SNX1-207ENST00000559401 C14orf132Q9NPU4 83 aa4.24□□□□□ -1.73
SNX1-207ENST00000559401 NDUFB1O75438 58 aa4.23□□□□□ -1.73
SNX1-207ENST00000559401 Q6ZQT0 140 aa4.23□□□□□ -1.73
SNX1-207ENST00000559401 LOC110117498A0A087WWA1 95 aa4.22□□□□□ -1.73
SNX1-207ENST00000559401 PDE6GP18545 87 aa4.22□□□□□ -1.73
SNX1-207ENST00000559401 FAM236DA0A1B0GTK5 79 aa4.21□□□□□ -1.74
SNX1-207ENST00000559401 FAM236CP0DP71 79 aa4.21□□□□□ -1.74
SNX1-207ENST00000559401 MTURNQ8N3F0 131 aa4.21□□□□□ -1.74
SNX1-207ENST00000559401 PRO0461Q9UI25 63 aa4.21□□□□□ -1.74
SNX1-207ENST00000559401 A0A1B0GW54 56 aa4.2□□□□□ -1.74
SNX1-207ENST00000559401 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
SNX1-207ENST00000559401 H3BT86 120 aa4.19□□□□□ -1.74
SNX1-207ENST00000559401 NREPQ16612 68 aa4.19□□□□□ -1.74
SNX1-207ENST00000559401 LCE2DQ5TA82 110 aaPredicted RBP4.19□□□□□ -1.74
SNX1-207ENST00000559401 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
SNX1-207ENST00000559401 A8MWP4 228 aa4.18□□□□□ -1.74
SNX1-207ENST00000559401 LORP23490 312 aaPredicted RBP4.18□□□□□ -1.74
SNX1-207ENST00000559401 SMCPP49901 116 aaPredicted RBP4.17□□□□□ -1.74
SNX1-207ENST00000559401 C8orf17Q9NRJ1 99 aa4.17□□□□□ -1.74
SNX1-207ENST00000559401 RBM12B-AS1Q9P1G2 102 aa4.17□□□□□ -1.74
SNX1-207ENST00000559401 IGKV3D-7A0A0C4DH55 119 aa4.16□□□□□ -1.74
SNX1-207ENST00000559401 ETDBQ3ZM63 59 aa4.16□□□□□ -1.74
SNX1-207ENST00000559401 ZCCHC13Q8WW36 166 aaKnown RBP4.16□□□□□ -1.74
SNX1-207ENST00000559401 J3QR89 54 aa4.13□□□□□ -1.75
SNX1-207ENST00000559401 HRES1P13985 223 aa4.13□□□□□ -1.75
SNX1-207ENST00000559401 Q6ZVQ6 151 aa4.13□□□□□ -1.75
SNX1-207ENST00000559401 PRR15Q8IV56 129 aa4.13□□□□□ -1.75
SNX1-207ENST00000559401 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
SNX1-207ENST00000559401 K7ERU9 68 aa4.12□□□□□ -1.75
SNX1-207ENST00000559401 BPY2O14599 106 aa4.12□□□□□ -1.75
SNX1-207ENST00000559401 NDUFS5O43920 106 aa4.12□□□□□ -1.75
SNX1-207ENST00000559401 SPINK7P58062 85 aa4.12□□□□□ -1.75
SNX1-207ENST00000559401 MMP24-AS1A0A0U1RRL7 71 aa4.11□□□□□ -1.75
SNX1-207ENST00000559401 K7EQZ3 153 aa4.11□□□□□ -1.75
SNX1-207ENST00000559401 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
SNX1-207ENST00000559401 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
SNX1-207ENST00000559401 hDV103S1A0JD37 113 aa4.1□□□□□ -1.75
SNX1-207ENST00000559401 TMEM254Q8TBM7 123 aa4.1□□□□□ -1.75
SNX1-207ENST00000559401 MRPL34Q9BQ48 92 aaKnown RBP4.1□□□□□ -1.75
SNX1-207ENST00000559401 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
SNX1-207ENST00000559401 WFDC13Q8IUB5 93 aa4.09□□□□□ -1.75
SNX1-207ENST00000559401 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
SNX1-207ENST00000559401 Q8N9L7 120 aa4.07□□□□□ -1.76
SNX1-207ENST00000559401 ACYP1P07311 99 aa4.06□□□□□ -1.76
SNX1-207ENST00000559401 UBL5Q9BZL1 73 aa4.06□□□□□ -1.76
SNX1-207ENST00000559401 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
SNX1-207ENST00000559401 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
SNX1-207ENST00000559401 FAM240AA0A1B0GVK7 77 aa4.04□□□□□ -1.76
SNX1-207ENST00000559401 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
SNX1-207ENST00000559401 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
SNX1-207ENST00000559401 LINC00846Q9NV44 126 aa4.04□□□□□ -1.76
SNX1-207ENST00000559401 HCG22E2RYF7 251 aa4.03□□□□□ -1.76
SNX1-207ENST00000559401 MT2AP02795 61 aa4.02□□□□□ -1.77
SNX1-207ENST00000559401 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
SNX1-207ENST00000559401 KRTAP10-10P60014 251 aa4□□□□□ -1.77
SNX1-207ENST00000559401 Q5W150 140 aa4□□□□□ -1.77
SNX1-207ENST00000559401 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
SNX1-207ENST00000559401 KRTAP3-2Q9BYR7 98 aa4□□□□□ -1.77
SNX1-207ENST00000559401 MT1FP04733 61 aa3.98□□□□□ -1.77
SNX1-207ENST00000559401 CXCL6P80162 114 aa3.98□□□□□ -1.77
SNX1-207ENST00000559401 H1FX-AS1Q4G0G2 97 aa3.97□□□□□ -1.77
SNX1-207ENST00000559401 LINC00643Q86TS7 51 aa3.97□□□□□ -1.77
SNX1-207ENST00000559401 C4orf26Q17RF5 130 aa3.94□□□□□ -1.78
SNX1-207ENST00000559401 MT-ATP8P03928 68 aa3.93□□□□□ -1.78
SNX1-207ENST00000559401 ATP5EP2Q5VTU8 51 aa3.93□□□□□ -1.78
SNX1-207ENST00000559401 IMUPQ9GZP8 106 aa3.92□□□□□ -1.78
SNX1-207ENST00000559401 USH2AO75445 5202 aa3.92□□□□□ -1.78
SNX1-207ENST00000559401 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
SNX1-207ENST00000559401 TP53AIP1Q9HCN2 124 aa3.91□□□□□ -1.78
SNX1-207ENST00000559401 LCE2BO14633 110 aa3.9□□□□□ -1.79
SNX1-207ENST00000559401 SCGB1A1P11684 91 aa3.88□□□□□ -1.79
SNX1-207ENST00000559401 HIST1H4AP62805 103 aaKnown RBP3.88□□□□□ -1.79
SNX1-207ENST00000559401 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
SNX1-207ENST00000559401 C5orf47Q569G3 176 aa3.87□□□□□ -1.79
SNX1-207ENST00000559401 C1orf64Q8NEQ6 169 aa3.87□□□□□ -1.79
SNX1-207ENST00000559401 S4R3F8 94 aa3.86□□□□□ -1.79
SNX1-207ENST00000559401 TRAV22A0A0B4J277 110 aa3.85□□□□□ -1.79
SNX1-207ENST00000559401 FAM236AA0A1B0GUQ0 79 aa3.84□□□□□ -1.79
SNX1-207ENST00000559401 FAM236BA0A1B0GV22 79 aa3.84□□□□□ -1.79
SNX1-207ENST00000559401 KRTAP19-1Q8IUB9 90 aa3.84□□□□□ -1.79
SNX1-207ENST00000559401 KRTAP3-1Q9BYR8 98 aa3.83□□□□□ -1.8
SNX1-207ENST00000559401 A0A087WVE0 104 aa3.82□□□□□ -1.8
SNX1-207ENST00000559401 LOC101927531A0A1B0GV80 90 aa3.82□□□□□ -1.8
SNX1-207ENST00000559401 CYP4F30PQ9H0H9 118 aa3.82□□□□□ -1.8
SNX1-207ENST00000559401 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
SNX1-207ENST00000559401 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
SNX1-207ENST00000559401 LCA10Q71F78 164 aa3.81□□□□□ -1.8
SNX1-207ENST00000559401 H0Y9P7 68 aa3.8□□□□□ -1.8
SNX1-207ENST00000559401 ATOX1O00244 68 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms