RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 IGKV4-1P06312 121 aa8.1□□□□□ -1.11
SNRPA1-207ENST00000559309 NREPQ16612 68 aa8.09□□□□□ -1.11
SNRPA1-207ENST00000559309 DEFB116Q30KQ4 102 aa8.09□□□□□ -1.11
SNRPA1-207ENST00000559309 XP32Q5T750 250 aa8.09□□□□□ -1.11
SNRPA1-207ENST00000559309 Q6ZVQ6 151 aa8.09□□□□□ -1.11
SNRPA1-207ENST00000559309 MUC2Q02817 5179 aa8.07□□□□□ -1.12
SNRPA1-207ENST00000559309 ACYP1P07311 99 aa8.06□□□□□ -1.12
SNRPA1-207ENST00000559309 DSCR10P59022 87 aa8.06□□□□□ -1.12
SNRPA1-207ENST00000559309 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
SNRPA1-207ENST00000559309 A8MWP4 228 aa8.04□□□□□ -1.12
SNRPA1-207ENST00000559309 A0A1B0GVX0 72 aa8.03□□□□□ -1.12
SNRPA1-207ENST00000559309 C9orf92A6NGG3 77 aa8.03□□□□□ -1.12
SNRPA1-207ENST00000559309 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
SNRPA1-207ENST00000559309 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
SNRPA1-207ENST00000559309 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
SNRPA1-207ENST00000559309 IGKV3D-7A0A0C4DH55 119 aa8.02□□□□□ -1.13
SNRPA1-207ENST00000559309 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
SNRPA1-207ENST00000559309 UBL5Q9BZL1 73 aa8.02□□□□□ -1.13
SNRPA1-207ENST00000559309 PRR15Q8IV56 129 aa8□□□□□ -1.13
SNRPA1-207ENST00000559309 C8orf87E5RJ46 101 aa7.99□□□□□ -1.13
SNRPA1-207ENST00000559309 BPY2O14599 106 aa7.98□□□□□ -1.13
SNRPA1-207ENST00000559309 LINC00313P59037 77 aa7.98□□□□□ -1.13
SNRPA1-207ENST00000559309 C20orf166-AS1Q96NR2 134 aa7.98□□□□□ -1.13
SNRPA1-207ENST00000559309 A8MUU9 505 aa7.97□□□□□ -1.13
SNRPA1-207ENST00000559309 K7EQZ3 153 aa7.97□□□□□ -1.13
SNRPA1-207ENST00000559309 IGHV6-1A0A0B4J1U7 121 aa7.96□□□□□ -1.14
SNRPA1-207ENST00000559309 NDUFB1O75438 58 aa7.96□□□□□ -1.14
SNRPA1-207ENST00000559309 Q75L30 129 aa7.96□□□□□ -1.14
SNRPA1-207ENST00000559309 RPL37P61927 97 aaKnown RBP7.95□□□□□ -1.14
SNRPA1-207ENST00000559309 CXCL6P80162 114 aa7.95□□□□□ -1.14
SNRPA1-207ENST00000559309 C8orf17Q9NRJ1 99 aa7.94□□□□□ -1.14
SNRPA1-207ENST00000559309 MMP24-AS1A0A0U1RRL7 71 aa7.93□□□□□ -1.14
SNRPA1-207ENST00000559309 J3QR89 54 aa7.92□□□□□ -1.14
SNRPA1-207ENST00000559309 Q8N9P0 234 aaPredicted RBP7.91□□□□□ -1.14
SNRPA1-207ENST00000559309 FAT4Q6V0I7 4981 aa7.9□□□□□ -1.14
SNRPA1-207ENST00000559309 Q8N9L7 120 aa7.9□□□□□ -1.14
SNRPA1-207ENST00000559309 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.14
SNRPA1-207ENST00000559309 ATP5EP2Q5VTU8 51 aa7.89□□□□□ -1.15
SNRPA1-207ENST00000559309 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
SNRPA1-207ENST00000559309 SEC61BP60468 96 aaKnown RBP7.88□□□□□ -1.15
SNRPA1-207ENST00000559309 LINC00643Q86TS7 51 aa7.88□□□□□ -1.15
SNRPA1-207ENST00000559309 TMEM254Q8TBM7 123 aa7.87□□□□□ -1.15
SNRPA1-207ENST00000559309 K7ERU9 68 aa7.85□□□□□ -1.15
SNRPA1-207ENST00000559309 KRTAP4-1Q9BYQ7 146 aa7.85□□□□□ -1.15
SNRPA1-207ENST00000559309 hDV103S1A0JD37 113 aa7.83□□□□□ -1.16
SNRPA1-207ENST00000559309 PCOTHQ58A44 107 aa7.83□□□□□ -1.16
SNRPA1-207ENST00000559309 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
SNRPA1-207ENST00000559309 HCG22E2RYF7 251 aa7.8□□□□□ -1.16
SNRPA1-207ENST00000559309 CASC2Q6XLA1 102 aa7.79□□□□□ -1.16
SNRPA1-207ENST00000559309 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
SNRPA1-207ENST00000559309 ATP11AUNQ6ZP68 121 aa7.77□□□□□ -1.17
SNRPA1-207ENST00000559309 WFDC13Q8IUB5 93 aa7.76□□□□□ -1.17
SNRPA1-207ENST00000559309 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
SNRPA1-207ENST00000559309 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
SNRPA1-207ENST00000559309 A0A087WVE0 104 aa7.7□□□□□ -1.18
SNRPA1-207ENST00000559309 HIST1H4AP62805 103 aaKnown RBP7.69□□□□□ -1.18
SNRPA1-207ENST00000559309 IMUPQ9GZP8 106 aa7.69□□□□□ -1.18
SNRPA1-207ENST00000559309 KRTAP19-2Q3LHN2 52 aa7.68□□□□□ -1.18
SNRPA1-207ENST00000559309 Q5W150 140 aa7.68□□□□□ -1.18
SNRPA1-207ENST00000559309 MT-ATP8P03928 68 aa7.67□□□□□ -1.18
SNRPA1-207ENST00000559309 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.66□□□□□ -1.18
SNRPA1-207ENST00000559309 TP53AIP1Q9HCN2 124 aa7.64□□□□□ -1.19
SNRPA1-207ENST00000559309 NDUFS5O43920 106 aa7.63□□□□□ -1.19
SNRPA1-207ENST00000559309 MPLKIPQ8TAP9 179 aa7.62□□□□□ -1.19
SNRPA1-207ENST00000559309 HRES1P13985 223 aa7.6□□□□□ -1.19
SNRPA1-207ENST00000559309 OCR1Q9BZK8 76 aa7.58□□□□□ -1.2
SNRPA1-207ENST00000559309 SPINK7P58062 85 aa7.57□□□□□ -1.2
SNRPA1-207ENST00000559309 UQCRQO14949 82 aa7.53□□□□□ -1.2
SNRPA1-207ENST00000559309 FLGP20930 4061 aaPredicted RBP7.52□□□□□ -1.2
SNRPA1-207ENST00000559309 TRAV22A0A0B4J277 110 aa7.51□□□□□ -1.21
SNRPA1-207ENST00000559309 IGKV2-30P06310 120 aa7.51□□□□□ -1.21
SNRPA1-207ENST00000559309 C7orf65Q6ZTY9 151 aa7.49□□□□□ -1.21
SNRPA1-207ENST00000559309 FAM236AA0A1B0GUQ0 79 aa7.47□□□□□ -1.21
SNRPA1-207ENST00000559309 FAM236BA0A1B0GV22 79 aa7.47□□□□□ -1.21
SNRPA1-207ENST00000559309 IGKV2D-30A0A075B6S6 120 aa7.45□□□□□ -1.22
SNRPA1-207ENST00000559309 ATOX1O00244 68 aa7.44□□□□□ -1.22
SNRPA1-207ENST00000559309 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
SNRPA1-207ENST00000559309 CYP4F30PQ9H0H9 118 aa7.44□□□□□ -1.22
SNRPA1-207ENST00000559309 LOC101927531A0A1B0GV80 90 aa7.43□□□□□ -1.22
SNRPA1-207ENST00000559309 H0Y9P7 68 aa7.43□□□□□ -1.22
SNRPA1-207ENST00000559309 MT1HP80294 61 aa7.42□□□□□ -1.22
SNRPA1-207ENST00000559309 C5orf47Q569G3 176 aa7.42□□□□□ -1.22
SNRPA1-207ENST00000559309 SCGB1A1P11684 91 aa7.41□□□□□ -1.22
SNRPA1-207ENST00000559309 SMIM20Q8N5G0 67 aa7.41□□□□□ -1.22
SNRPA1-207ENST00000559309 CRCT1Q9UGL9 99 aa7.41□□□□□ -1.22
SNRPA1-207ENST00000559309 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
SNRPA1-207ENST00000559309 TRAV7A0A075B6U4 112 aa7.39□□□□□ -1.23
SNRPA1-207ENST00000559309 H3BPC8 53 aa7.38□□□□□ -1.23
SNRPA1-207ENST00000559309 FSIP2Q5CZC0 6907 aa7.38□□□□□ -1.23
SNRPA1-207ENST00000559309 C1orf64Q8NEQ6 169 aa7.36□□□□□ -1.23
SNRPA1-207ENST00000559309 MP68P56378 58 aa7.35□□□□□ -1.23
SNRPA1-207ENST00000559309 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
SNRPA1-207ENST00000559309 KRTAP3-1Q9BYR8 98 aa7.35□□□□□ -1.23
SNRPA1-207ENST00000559309 LINC00208Q96KT6 92 aa7.34□□□□□ -1.23
SNRPA1-207ENST00000559309 C4orf26Q17RF5 130 aa7.32□□□□□ -1.24
SNRPA1-207ENST00000559309 KLKP1Q107X0 134 aa7.3□□□□□ -1.24
SNRPA1-207ENST00000559309 SERP2Q8N6R1 65 aa7.3□□□□□ -1.24
SNRPA1-207ENST00000559309 FAM236DA0A1B0GTK5 79 aa7.28□□□□□ -1.24
SNRPA1-207ENST00000559309 FAM236CP0DP71 79 aa7.28□□□□□ -1.24
SNRPA1-207ENST00000559309 KRTAP4-12Q9BQ66 201 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms