RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 C14orf132Q9NPU4 83 aa6.16□□□□□ -1.42
SNX1-204ENST00000559061 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
SNX1-204ENST00000559061 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
SNX1-204ENST00000559061 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
SNX1-204ENST00000559061 K7EP34 96 aa6.14□□□□□ -1.43
SNX1-204ENST00000559061 VPS25Q9BRG1 176 aa6.14□□□□□ -1.43
SNX1-204ENST00000559061 FAT4Q6V0I7 4981 aa6.13□□□□□ -1.43
SNX1-204ENST00000559061 DEFB116Q30KQ4 102 aa6.13□□□□□ -1.43
SNX1-204ENST00000559061 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
SNX1-204ENST00000559061 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
SNX1-204ENST00000559061 PCOTHQ58A44 107 aa6.11□□□□□ -1.43
SNX1-204ENST00000559061 KRTAP16-1A8MUX0 517 aa6.1□□□□□ -1.43
SNX1-204ENST00000559061 IGKV4-1P06312 121 aa6.1□□□□□ -1.43
SNX1-204ENST00000559061 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
SNX1-204ENST00000559061 DSCR10P59022 87 aa6.09□□□□□ -1.43
SNX1-204ENST00000559061 SIGMAR1Q99720 223 aa6.09□□□□□ -1.43
SNX1-204ENST00000559061 PDE6GP18545 87 aa6.07□□□□□ -1.44
SNX1-204ENST00000559061 KRTAP19-2Q3LHN2 52 aa6.07□□□□□ -1.44
SNX1-204ENST00000559061 Q75L30 129 aa6.06□□□□□ -1.44
SNX1-204ENST00000559061 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
SNX1-204ENST00000559061 A8MUU9 505 aa6.05□□□□□ -1.44
SNX1-204ENST00000559061 A0A1B0GW54 56 aa6.04□□□□□ -1.44
SNX1-204ENST00000559061 A0A1B0GVX0 72 aa6.03□□□□□ -1.44
SNX1-204ENST00000559061 IGHV6-1A0A0B4J1U7 121 aa6.01□□□□□ -1.45
SNX1-204ENST00000559061 IGKV3D-7A0A0C4DH55 119 aa6.01□□□□□ -1.45
SNX1-204ENST00000559061 C21orf62-AS1Q17RA5 79 aa6.01□□□□□ -1.45
SNX1-204ENST00000559061 GTF2H5Q6ZYL4 71 aa6.01□□□□□ -1.45
SNX1-204ENST00000559061 LINC00313P59037 77 aa6□□□□□ -1.45
SNX1-204ENST00000559061 J3KT08 172 aa5.99□□□□□ -1.45
SNX1-204ENST00000559061 A8MWP4 228 aa5.98□□□□□ -1.45
SNX1-204ENST00000559061 F8W1H4 67 aa5.97□□□□□ -1.45
SNX1-204ENST00000559061 ETDBQ3ZM63 59 aa5.97□□□□□ -1.45
SNX1-204ENST00000559061 Q6ZVQ6 151 aa5.97□□□□□ -1.45
SNX1-204ENST00000559061 C8orf87E5RJ46 101 aa5.96□□□□□ -1.46
SNX1-204ENST00000559061 NREPQ16612 68 aa5.96□□□□□ -1.46
SNX1-204ENST00000559061 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
SNX1-204ENST00000559061 LINC00846Q9NV44 126 aa5.96□□□□□ -1.46
SNX1-204ENST00000559061 A0A1B0GV90 55 aa5.95□□□□□ -1.46
SNX1-204ENST00000559061 PRR15Q8IV56 129 aa5.95□□□□□ -1.46
SNX1-204ENST00000559061 C8orf17Q9NRJ1 99 aa5.95□□□□□ -1.46
SNX1-204ENST00000559061 MMP24-AS1A0A0U1RRL7 71 aa5.94□□□□□ -1.46
SNX1-204ENST00000559061 K7EQZ3 153 aa5.94□□□□□ -1.46
SNX1-204ENST00000559061 ATP11AUNQ6ZP68 121 aa5.93□□□□□ -1.46
SNX1-204ENST00000559061 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
SNX1-204ENST00000559061 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
SNX1-204ENST00000559061 FLGP20930 4061 aaPredicted RBP5.92□□□□□ -1.46
SNX1-204ENST00000559061 A0A0U1RQV1 116 aa5.91□□□□□ -1.46
SNX1-204ENST00000559061 Q8N9L7 120 aa5.91□□□□□ -1.46
SNX1-204ENST00000559061 BPY2O14599 106 aa5.89□□□□□ -1.47
SNX1-204ENST00000559061 NDUFB1O75438 58 aa5.89□□□□□ -1.47
SNX1-204ENST00000559061 MT1HP80294 61 aa5.88□□□□□ -1.47
SNX1-204ENST00000559061 TMEM254Q8TBM7 123 aa5.85□□□□□ -1.47
SNX1-204ENST00000559061 ZCCHC13Q8WW36 166 aaKnown RBP5.85□□□□□ -1.47
SNX1-204ENST00000559061 HRES1P13985 223 aa5.84□□□□□ -1.47
SNX1-204ENST00000559061 MRPL34Q9BQ48 92 aaKnown RBP5.84□□□□□ -1.47
SNX1-204ENST00000559061 UBL5Q9BZL1 73 aa5.84□□□□□ -1.47
SNX1-204ENST00000559061 hDV103S1A0JD37 113 aa5.83□□□□□ -1.48
SNX1-204ENST00000559061 MPLKIPQ8TAP9 179 aa5.83□□□□□ -1.48
SNX1-204ENST00000559061 WFDC13Q8IUB5 93 aa5.8□□□□□ -1.48
SNX1-204ENST00000559061 FAM240AA0A1B0GVK7 77 aa5.79□□□□□ -1.48
SNX1-204ENST00000559061 Q5W150 140 aa5.79□□□□□ -1.48
SNX1-204ENST00000559061 CXCL6P80162 114 aa5.78□□□□□ -1.48
SNX1-204ENST00000559061 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
SNX1-204ENST00000559061 CASC2Q6XLA1 102 aa5.77□□□□□ -1.49
SNX1-204ENST00000559061 SPINK7P58062 85 aa5.76□□□□□ -1.49
SNX1-204ENST00000559061 HCG22E2RYF7 251 aa5.75□□□□□ -1.49
SNX1-204ENST00000559061 ACYP1P07311 99 aa5.75□□□□□ -1.49
SNX1-204ENST00000559061 COX6B2Q6YFQ2 88 aa5.74□□□□□ -1.49
SNX1-204ENST00000559061 NDUFS5O43920 106 aa5.72□□□□□ -1.49
SNX1-204ENST00000559061 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
SNX1-204ENST00000559061 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
SNX1-204ENST00000559061 ATP5EP2Q5VTU8 51 aa5.68□□□□□ -1.5
SNX1-204ENST00000559061 LINC00643Q86TS7 51 aa5.66□□□□□ -1.5
SNX1-204ENST00000559061 A0A087WVE0 104 aa5.65□□□□□ -1.5
SNX1-204ENST00000559061 RBM12B-AS1Q9P1G2 102 aa5.64□□□□□ -1.51
SNX1-204ENST00000559061 IGKV2D-30A0A075B6S6 120 aa5.63□□□□□ -1.51
SNX1-204ENST00000559061 IGKV2-30P06310 120 aa5.63□□□□□ -1.51
SNX1-204ENST00000559061 FAM236DA0A1B0GTK5 79 aa5.62□□□□□ -1.51
SNX1-204ENST00000559061 M0R2T5 61 aa5.62□□□□□ -1.51
SNX1-204ENST00000559061 FAM236CP0DP71 79 aa5.62□□□□□ -1.51
SNX1-204ENST00000559061 C7orf65Q6ZTY9 151 aa5.62□□□□□ -1.51
SNX1-204ENST00000559061 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
SNX1-204ENST00000559061 HIST1H4AP62805 103 aaKnown RBP5.61□□□□□ -1.51
SNX1-204ENST00000559061 TP53AIP1Q9HCN2 124 aa5.58□□□□□ -1.52
SNX1-204ENST00000559061 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
SNX1-204ENST00000559061 J3QR89 54 aa5.56□□□□□ -1.52
SNX1-204ENST00000559061 C4orf26Q17RF5 130 aa5.55□□□□□ -1.52
SNX1-204ENST00000559061 MT2AP02795 61 aa5.54□□□□□ -1.52
SNX1-204ENST00000559061 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
SNX1-204ENST00000559061 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
SNX1-204ENST00000559061 TRAV22A0A0B4J277 110 aa5.52□□□□□ -1.53
SNX1-204ENST00000559061 MT1FP04733 61 aa5.52□□□□□ -1.53
SNX1-204ENST00000559061 H1FX-AS1Q4G0G2 97 aa5.52□□□□□ -1.53
SNX1-204ENST00000559061 OCR1Q9BZK8 76 aa5.52□□□□□ -1.53
SNX1-204ENST00000559061 CYP4F30PQ9H0H9 118 aa5.52□□□□□ -1.53
SNX1-204ENST00000559061 MT-ATP8P03928 68 aa5.51□□□□□ -1.53
SNX1-204ENST00000559061 UQCRQO14949 82 aa5.5□□□□□ -1.53
SNX1-204ENST00000559061 H0Y9P7 68 aa5.48□□□□□ -1.53
SNX1-204ENST00000559061 K7ERU9 68 aa5.48□□□□□ -1.53
SNX1-204ENST00000559061 LOC101927531A0A1B0GV80 90 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms