RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 HIST1H4AP62805 103 aaKnown RBP5.46□□□□□ -1.53
SPG11-214ENST00000558989 TEX49A0A1B0GTD5 131 aa5.46□□□□□ -1.54
SPG11-214ENST00000558989 SPRR1BP22528 89 aa5.46□□□□□ -1.54
SPG11-214ENST00000558989 HIGD1BQ9P298 99 aa5.46□□□□□ -1.54
SPG11-214ENST00000558989 UQCR10Q9UDW1 63 aa5.46□□□□□ -1.54
SPG11-214ENST00000558989 SLC25A20O43772 301 aa5.45□□□□□ -1.54
SPG11-214ENST00000558989 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
SPG11-214ENST00000558989 C2orf91Q6ZV80 131 aa5.44□□□□□ -1.54
SPG11-214ENST00000558989 RAB37Q96AX2 223 aa5.44□□□□□ -1.54
SPG11-214ENST00000558989 CFC1BP0CG36 223 aa5.44□□□□□ -1.54
SPG11-214ENST00000558989 NHP2Q9NX24 153 aaKnown RBP5.44□□□□□ -1.54
SPG11-214ENST00000558989 CFC1P0CG37 223 aa5.43□□□□□ -1.54
SPG11-214ENST00000558989 CEND1Q8N111 149 aa5.43□□□□□ -1.54
SPG11-214ENST00000558989 PRO1933Q9H354 126 aa5.43□□□□□ -1.54
SPG11-214ENST00000558989 hADV29S1A0JD25 119 aa5.42□□□□□ -1.54
SPG11-214ENST00000558989 LINC00575Q6W349 94 aa5.42□□□□□ -1.54
SPG11-214ENST00000558989 Q6ZQY7 126 aa5.42□□□□□ -1.54
SPG11-214ENST00000558989 TPRXLQ17RH7 258 aa5.41□□□□□ -1.54
SPG11-214ENST00000558989 IGLV5-48A0A075B6I7 105 aa5.41□□□□□ -1.54
SPG11-214ENST00000558989 FP248Q71RG6 208 aaPredicted RBP5.41□□□□□ -1.54
SPG11-214ENST00000558989 MUC2Q02817 5179 aa5.4□□□□□ -1.54
SPG11-214ENST00000558989 K7ERJ3 54 aa5.4□□□□□ -1.54
SPG11-214ENST00000558989 C7orf65Q6ZTY9 151 aa5.4□□□□□ -1.54
SPG11-214ENST00000558989 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
SPG11-214ENST00000558989 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
SPG11-214ENST00000558989 FXYD2P54710 66 aa5.39□□□□□ -1.55
SPG11-214ENST00000558989 RPS29P62273 56 aaKnown RBP5.39□□□□□ -1.55
SPG11-214ENST00000558989 F8WEM9 126 aa5.39□□□□□ -1.55
SPG11-214ENST00000558989 KRTAP13-3Q3SY46 172 aa5.39□□□□□ -1.55
SPG11-214ENST00000558989 BVES-AS1Q5T3Y7 98 aa5.39□□□□□ -1.55
SPG11-214ENST00000558989 TRBV20-1A0A075B6N2 111 aa5.38□□□□□ -1.55
SPG11-214ENST00000558989 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
SPG11-214ENST00000558989 LIMD2Q9BT23 127 aa5.38□□□□□ -1.55
SPG11-214ENST00000558989 A0A0B4J2C4 111 aa5.37□□□□□ -1.55
SPG11-214ENST00000558989 A8MWP4 228 aa5.37□□□□□ -1.55
SPG11-214ENST00000558989 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
SPG11-214ENST00000558989 C9orf92A6NGG3 77 aa5.36□□□□□ -1.55
SPG11-214ENST00000558989 PRO1854Q9UHT4 67 aa5.36□□□□□ -1.55
SPG11-214ENST00000558989 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
SPG11-214ENST00000558989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.35□□□□□ -1.55
SPG11-214ENST00000558989 H3BUT2 72 aa5.34□□□□□ -1.55
SPG11-214ENST00000558989 H3BT86 120 aa5.34□□□□□ -1.55
SPG11-214ENST00000558989 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
SPG11-214ENST00000558989 A6NED7 52 aa5.32□□□□□ -1.56
SPG11-214ENST00000558989 H0YGX0 51 aa5.32□□□□□ -1.56
SPG11-214ENST00000558989 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
SPG11-214ENST00000558989 IGFL1Q6UW32 110 aa5.32□□□□□ -1.56
SPG11-214ENST00000558989 CLEC2BQ92478 149 aa5.32□□□□□ -1.56
SPG11-214ENST00000558989 SNCGO76070 127 aa5.32□□□□□ -1.56
SPG11-214ENST00000558989 SERP1Q9Y6X1 66 aa5.32□□□□□ -1.56
SPG11-214ENST00000558989 TCL1BO95988 128 aa5.31□□□□□ -1.56
SPG11-214ENST00000558989 Q6JHZ5 121 aa5.3□□□□□ -1.56
SPG11-214ENST00000558989 TRBV7-7A0A0K0K1E9 115 aa5.27□□□□□ -1.57
SPG11-214ENST00000558989 NDUFAF8A1L188 74 aa5.27□□□□□ -1.57
SPG11-214ENST00000558989 PPDPFLQ8WWR9 84 aa5.27□□□□□ -1.57
SPG11-214ENST00000558989 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
SPG11-214ENST00000558989 DNAL4O96015 105 aa5.27□□□□□ -1.57
SPG11-214ENST00000558989 ASB16-AS1Q495Z4 193 aa5.27□□□□□ -1.57
SPG11-214ENST00000558989 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
SPG11-214ENST00000558989 TRACP01848 142 aa5.26□□□□□ -1.57
SPG11-214ENST00000558989 COX6CP09669 75 aa5.25□□□□□ -1.57
SPG11-214ENST00000558989 PCOTHQ58A44 107 aa5.24□□□□□ -1.57
SPG11-214ENST00000558989 ORMDL1Q9P0S3 153 aa5.24□□□□□ -1.57
SPG11-214ENST00000558989 SPANXA2-OT1Q8N9U9 137 aa5.23□□□□□ -1.57
SPG11-214ENST00000558989 A0A087WSZ3 146 aa5.22□□□□□ -1.57
SPG11-214ENST00000558989 A8MUU9 505 aa5.22□□□□□ -1.57
SPG11-214ENST00000558989 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
SPG11-214ENST00000558989 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
SPG11-214ENST00000558989 A0A1W2PNM2 257 aa5.19□□□□□ -1.58
SPG11-214ENST00000558989 MT-ATP8P03928 68 aa5.19□□□□□ -1.58
SPG11-214ENST00000558989 ATP11AUNQ6ZP68 121 aa5.19□□□□□ -1.58
SPG11-214ENST00000558989 OBSCN-AS1Q96MR7 158 aa5.19□□□□□ -1.58
SPG11-214ENST00000558989 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
SPG11-214ENST00000558989 A6NN06 94 aa5.18□□□□□ -1.58
SPG11-214ENST00000558989 IGKV2-30P06310 120 aa5.18□□□□□ -1.58
SPG11-214ENST00000558989 RPL37P61927 97 aaKnown RBP5.16□□□□□ -1.58
SPG11-214ENST00000558989 CCKP06307 115 aa5.16□□□□□ -1.58
SPG11-214ENST00000558989 DEFB116Q30KQ4 102 aa5.16□□□□□ -1.58
SPG11-214ENST00000558989 Q96NJ1 140 aa5.16□□□□□ -1.58
SPG11-214ENST00000558989 A0A1W2PPM0 123 aa5.15□□□□□ -1.59
SPG11-214ENST00000558989 BAALC-AS2P0C853 105 aa5.15□□□□□ -1.59
SPG11-214ENST00000558989 C1orf64Q8NEQ6 169 aa5.15□□□□□ -1.59
SPG11-214ENST00000558989 H3BQ85 93 aa5.14□□□□□ -1.59
SPG11-214ENST00000558989 COX7CP15954 63 aa5.13□□□□□ -1.59
SPG11-214ENST00000558989 Q5W150 140 aa5.13□□□□□ -1.59
SPG11-214ENST00000558989 DSCR8Q96T75 97 aa5.13□□□□□ -1.59
SPG11-214ENST00000558989 H3BPC8 53 aa5.13□□□□□ -1.59
SPG11-214ENST00000558989 DSCR10P59022 87 aa5.13□□□□□ -1.59
SPG11-214ENST00000558989 RBM3P98179 157 aaKnown RBP5.13□□□□□ -1.59
SPG11-214ENST00000558989 ATXN8Q156A1 80 aa5.13□□□□□ -1.59
SPG11-214ENST00000558989 TRAV7A0A075B6U4 112 aa5.12□□□□□ -1.59
SPG11-214ENST00000558989 IGKV4-1P06312 121 aa5.12□□□□□ -1.59
SPG11-214ENST00000558989 TRBV7-4A0A0J9YYF1 115 aa5.11□□□□□ -1.59
SPG11-214ENST00000558989 K7EP34 96 aa5.11□□□□□ -1.59
SPG11-214ENST00000558989 SPCS1Q9Y6A9 102 aa5.1□□□□□ -1.59
SPG11-214ENST00000558989 F8W1H4 67 aa5.09□□□□□ -1.6
SPG11-214ENST00000558989 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
SPG11-214ENST00000558989 ROMO1P60602 79 aa5.07□□□□□ -1.6
SPG11-214ENST00000558989 hDV103S1A0JD37 113 aa5.07□□□□□ -1.6
SPG11-214ENST00000558989 LINC00472Q9H8W2 130 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms