RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
CTDSPL2-204ENST00000558966 ORMDL1Q9P0S3 153 aa3.21□□□□□ -1.9
CTDSPL2-204ENST00000558966 A0A087WSZ3 146 aa3.2□□□□□ -1.9
CTDSPL2-204ENST00000558966 SS18L2Q9UHA2 77 aa3.2□□□□□ -1.9
CTDSPL2-204ENST00000558966 A0A1B0GV72 72 aa3.2□□□□□ -1.9
CTDSPL2-204ENST00000558966 OBSCN-AS1Q96MR7 158 aa3.2□□□□□ -1.9
CTDSPL2-204ENST00000558966 Q96NJ1 140 aa3.2□□□□□ -1.9
CTDSPL2-204ENST00000558966 SMIM6P0DI80 62 aa3.19□□□□□ -1.9
CTDSPL2-204ENST00000558966 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
CTDSPL2-204ENST00000558966 H3BQ85 93 aa3.18□□□□□ -1.9
CTDSPL2-204ENST00000558966 TMEM256-PLSCR3K7ERE1 68 aa3.18□□□□□ -1.9
CTDSPL2-204ENST00000558966 TRACP01848 142 aa3.18□□□□□ -1.9
CTDSPL2-204ENST00000558966 MT3P25713 68 aa3.18□□□□□ -1.9
CTDSPL2-204ENST00000558966 TRBV7-4A0A0J9YYF1 115 aa3.18□□□□□ -1.9
CTDSPL2-204ENST00000558966 SCGB1C2P0DMR2 95 aa3.18□□□□□ -1.9
CTDSPL2-204ENST00000558966 ANKRD29Q8N6D5 301 aa3.18□□□□□ -1.9
CTDSPL2-204ENST00000558966 M0R143 59 aa3.17□□□□□ -1.9
CTDSPL2-204ENST00000558966 NAA38Q9BRA0 125 aaKnown RBP3.17□□□□□ -1.9
CTDSPL2-204ENST00000558966 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
CTDSPL2-204ENST00000558966 CCKP06307 115 aa3.16□□□□□ -1.9
CTDSPL2-204ENST00000558966 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
CTDSPL2-204ENST00000558966 SIGMAR1Q99720 223 aa3.16□□□□□ -1.9
CTDSPL2-204ENST00000558966 MT1HP80294 61 aa3.15□□□□□ -1.91
CTDSPL2-204ENST00000558966 C20orf166-AS1Q96NR2 134 aa3.15□□□□□ -1.91
CTDSPL2-204ENST00000558966 LOC105371267A0A1B0GV96 52 aa3.14□□□□□ -1.91
CTDSPL2-204ENST00000558966 A8MUU9 505 aa3.14□□□□□ -1.91
CTDSPL2-204ENST00000558966 BAALC-AS2P0C853 105 aa3.14□□□□□ -1.91
CTDSPL2-204ENST00000558966 DSCR10P59022 87 aa3.14□□□□□ -1.91
CTDSPL2-204ENST00000558966 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
CTDSPL2-204ENST00000558966 TSTD3H0UI37 97 aa3.13□□□□□ -1.91
CTDSPL2-204ENST00000558966 IGKV4-1P06312 121 aa3.13□□□□□ -1.91
CTDSPL2-204ENST00000558966 RBM3P98179 157 aaKnown RBP3.13□□□□□ -1.91
CTDSPL2-204ENST00000558966 DEFB116Q30KQ4 102 aa3.13□□□□□ -1.91
CTDSPL2-204ENST00000558966 ATP11AUNQ6ZP68 121 aa3.13□□□□□ -1.91
CTDSPL2-204ENST00000558966 VPS25Q9BRG1 176 aa3.13□□□□□ -1.91
CTDSPL2-204ENST00000558966 LINC00472Q9H8W2 130 aa3.13□□□□□ -1.91
CTDSPL2-204ENST00000558966 ATXN8Q156A1 80 aa3.13□□□□□ -1.91
CTDSPL2-204ENST00000558966 BATFQ16520 125 aa3.12□□□□□ -1.91
CTDSPL2-204ENST00000558966 DSCR8Q96T75 97 aa3.12□□□□□ -1.91
CTDSPL2-204ENST00000558966 C9JAW5 83 aa3.11□□□□□ -1.91
CTDSPL2-204ENST00000558966 LINC00313P59037 77 aa3.11□□□□□ -1.91
CTDSPL2-204ENST00000558966 IGHV6-1A0A0B4J1U7 121 aa3.1□□□□□ -1.91
CTDSPL2-204ENST00000558966 COX6B2Q6YFQ2 88 aa3.1□□□□□ -1.91
CTDSPL2-204ENST00000558966 Q6ZQT0 140 aa3.1□□□□□ -1.91
CTDSPL2-204ENST00000558966 LOC110117498A0A087WWA1 95 aa3.09□□□□□ -1.91
CTDSPL2-204ENST00000558966 JMJD7-PLA2G4BH0Y9G9 81 aa3.09□□□□□ -1.91
CTDSPL2-204ENST00000558966 LYRM7Q5U5X0 104 aa3.09□□□□□ -1.91
CTDSPL2-204ENST00000558966 TRBV20-1A0A075B6N2 111 aa3.09□□□□□ -1.92
CTDSPL2-204ENST00000558966 A0A1B0GVX0 72 aa3.09□□□□□ -1.92
CTDSPL2-204ENST00000558966 TAX1BP3O14907 124 aa3.09□□□□□ -1.92
CTDSPL2-204ENST00000558966 KRTAP10-6P60371 365 aaPredicted RBP3.08□□□□□ -1.92
CTDSPL2-204ENST00000558966 C14orf132Q9NPU4 83 aa3.08□□□□□ -1.92
CTDSPL2-204ENST00000558966 A0A1W2PPM0 123 aa3.07□□□□□ -1.92
CTDSPL2-204ENST00000558966 C8orf87E5RJ46 101 aa3.07□□□□□ -1.92
CTDSPL2-204ENST00000558966 J3KT08 172 aa3.07□□□□□ -1.92
CTDSPL2-204ENST00000558966 M0R2T5 61 aa3.07□□□□□ -1.92
CTDSPL2-204ENST00000558966 PDE6GP18545 87 aa3.07□□□□□ -1.92
CTDSPL2-204ENST00000558966 CXCL6P80162 114 aa3.07□□□□□ -1.92
CTDSPL2-204ENST00000558966 MTURNQ8N3F0 131 aa3.07□□□□□ -1.92
CTDSPL2-204ENST00000558966 A0A1B0GW54 56 aa3.06□□□□□ -1.92
CTDSPL2-204ENST00000558966 H3BT86 120 aa3.06□□□□□ -1.92
CTDSPL2-204ENST00000558966 IGKV3D-7A0A0C4DH55 119 aa3.05□□□□□ -1.92
CTDSPL2-204ENST00000558966 A8MWP4 228 aa3.04□□□□□ -1.92
CTDSPL2-204ENST00000558966 NDUFB1O75438 58 aa3.04□□□□□ -1.92
CTDSPL2-204ENST00000558966 HRES1P13985 223 aa3.04□□□□□ -1.92
CTDSPL2-204ENST00000558966 C8orf17Q9NRJ1 99 aa3.04□□□□□ -1.92
CTDSPL2-204ENST00000558966 SPCS1Q9Y6A9 102 aa3.03□□□□□ -1.92
CTDSPL2-204ENST00000558966 NREPQ16612 68 aa3.03□□□□□ -1.93
CTDSPL2-204ENST00000558966 ZCCHC13Q8WW36 166 aaKnown RBP3.03□□□□□ -1.93
CTDSPL2-204ENST00000558966 FSIP2Q5CZC0 6907 aa3.02□□□□□ -1.93
CTDSPL2-204ENST00000558966 PRR15Q8IV56 129 aa3.02□□□□□ -1.93
CTDSPL2-204ENST00000558966 MMP24-AS1A0A0U1RRL7 71 aa3.01□□□□□ -1.93
CTDSPL2-204ENST00000558966 COL5A1-AS1Q5SY13 56 aa3.01□□□□□ -1.93
CTDSPL2-204ENST00000558966 FAM236DA0A1B0GTK5 79 aa3□□□□□ -1.93
CTDSPL2-204ENST00000558966 K7EQZ3 153 aa3□□□□□ -1.93
CTDSPL2-204ENST00000558966 FAM236CP0DP71 79 aa3□□□□□ -1.93
CTDSPL2-204ENST00000558966 PRO0461Q9UI25 63 aa3□□□□□ -1.93
CTDSPL2-204ENST00000558966 SPINK7P58062 85 aa2.99□□□□□ -1.93
CTDSPL2-204ENST00000558966 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CTDSPL2-204ENST00000558966 RBM12B-AS1Q9P1G2 102 aa2.99□□□□□ -1.93
CTDSPL2-204ENST00000558966 K7EP34 96 aa2.99□□□□□ -1.93
CTDSPL2-204ENST00000558966 TMEM254Q8TBM7 123 aa2.99□□□□□ -1.93
CTDSPL2-204ENST00000558966 CRCT1Q9UGL9 99 aa2.99□□□□□ -1.93
CTDSPL2-204ENST00000558966 USH2AO75445 5202 aa2.98□□□□□ -1.93
CTDSPL2-204ENST00000558966 BPY2O14599 106 aa2.98□□□□□ -1.93
CTDSPL2-204ENST00000558966 MRPL34Q9BQ48 92 aaKnown RBP2.98□□□□□ -1.93
CTDSPL2-204ENST00000558966 hDV103S1A0JD37 113 aa2.97□□□□□ -1.93
CTDSPL2-204ENST00000558966 SEC61GP60059 68 aa2.97□□□□□ -1.93
CTDSPL2-204ENST00000558966 Q8N9L7 120 aa2.97□□□□□ -1.93
CTDSPL2-204ENST00000558966 PCP4L1A6NKN8 68 aa2.96□□□□□ -1.93
CTDSPL2-204ENST00000558966 WFDC13Q8IUB5 93 aa2.96□□□□□ -1.94
CTDSPL2-204ENST00000558966 LINC00846Q9NV44 126 aa2.96□□□□□ -1.94
CTDSPL2-204ENST00000558966 MT2AP02795 61 aa2.95□□□□□ -1.94
CTDSPL2-204ENST00000558966 NDUFS5O43920 106 aa2.94□□□□□ -1.94
CTDSPL2-204ENST00000558966 Q5W150 140 aa2.94□□□□□ -1.94
CTDSPL2-204ENST00000558966 SSPOA2VEC9 5147 aa2.94□□□□□ -1.94
CTDSPL2-204ENST00000558966 MT1FP04733 61 aa2.93□□□□□ -1.94
CTDSPL2-204ENST00000558966 CASC2Q6XLA1 102 aa2.93□□□□□ -1.94
CTDSPL2-204ENST00000558966 GTF2H5Q6ZYL4 71 aa2.93□□□□□ -1.94
CTDSPL2-204ENST00000558966 UBL5Q9BZL1 73 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms