RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 A0A1B0GW54 56 aa8.34□□□□□ -1.07
LINC01220-201ENST00000558575 GTF2H5Q6ZYL4 71 aa8.33□□□□□ -1.08
LINC01220-201ENST00000558575 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
LINC01220-201ENST00000558575 C21orf62-AS1Q17RA5 79 aa8.32□□□□□ -1.08
LINC01220-201ENST00000558575 SIGMAR1Q99720 223 aa8.32□□□□□ -1.08
LINC01220-201ENST00000558575 RPL37P61927 97 aaKnown RBP8.3□□□□□ -1.08
LINC01220-201ENST00000558575 NOTCH2NLQ7Z3S9 236 aa8.3□□□□□ -1.08
LINC01220-201ENST00000558575 DSCR10P59022 87 aa8.29□□□□□ -1.08
LINC01220-201ENST00000558575 PCOTHQ58A44 107 aa8.29□□□□□ -1.08
LINC01220-201ENST00000558575 F8W1H4 67 aa8.27□□□□□ -1.09
LINC01220-201ENST00000558575 MT1HP80294 61 aa8.27□□□□□ -1.09
LINC01220-201ENST00000558575 KRTAP19-2Q3LHN2 52 aa8.26□□□□□ -1.09
LINC01220-201ENST00000558575 KRTAP16-1A8MUX0 517 aa8.25□□□□□ -1.09
LINC01220-201ENST00000558575 LORP23490 312 aaPredicted RBP8.25□□□□□ -1.09
LINC01220-201ENST00000558575 J3KT08 172 aa8.24□□□□□ -1.09
LINC01220-201ENST00000558575 LINC00313P59037 77 aa8.24□□□□□ -1.09
LINC01220-201ENST00000558575 NREPQ16612 68 aa8.24□□□□□ -1.09
LINC01220-201ENST00000558575 Q75L30 129 aa8.24□□□□□ -1.09
LINC01220-201ENST00000558575 IGHV6-1A0A0B4J1U7 121 aa8.23□□□□□ -1.09
LINC01220-201ENST00000558575 A0A1B0GVX0 72 aa8.23□□□□□ -1.09
LINC01220-201ENST00000558575 ETDBQ3ZM63 59 aa8.23□□□□□ -1.09
LINC01220-201ENST00000558575 C20orf166-AS1Q96NR2 134 aa8.23□□□□□ -1.09
LINC01220-201ENST00000558575 A8MUU9 505 aa8.22□□□□□ -1.09
LINC01220-201ENST00000558575 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
LINC01220-201ENST00000558575 A0A1B0GV90 55 aa8.2□□□□□ -1.1
LINC01220-201ENST00000558575 IGKV3D-7A0A0C4DH55 119 aa8.19□□□□□ -1.1
LINC01220-201ENST00000558575 A8MWP4 228 aa8.19□□□□□ -1.1
LINC01220-201ENST00000558575 C8orf87E5RJ46 101 aa8.17□□□□□ -1.1
LINC01220-201ENST00000558575 Q6ZVQ6 151 aa8.17□□□□□ -1.1
LINC01220-201ENST00000558575 LINC00846Q9NV44 126 aa8.17□□□□□ -1.1
LINC01220-201ENST00000558575 NDUFB1O75438 58 aa8.15□□□□□ -1.1
LINC01220-201ENST00000558575 PRR15Q8IV56 129 aa8.14□□□□□ -1.11
LINC01220-201ENST00000558575 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
LINC01220-201ENST00000558575 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
LINC01220-201ENST00000558575 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
LINC01220-201ENST00000558575 BPY2O14599 106 aa8.11□□□□□ -1.11
LINC01220-201ENST00000558575 K7EQZ3 153 aa8.1□□□□□ -1.11
LINC01220-201ENST00000558575 USH2AO75445 5202 aa8.08□□□□□ -1.12
LINC01220-201ENST00000558575 MMP24-AS1A0A0U1RRL7 71 aa8.07□□□□□ -1.12
LINC01220-201ENST00000558575 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
LINC01220-201ENST00000558575 UBL5Q9BZL1 73 aa8.07□□□□□ -1.12
LINC01220-201ENST00000558575 Q8N9L7 120 aa8.06□□□□□ -1.12
LINC01220-201ENST00000558575 FCGBPQ9Y6R7 5405 aaPredicted RBP8.03□□□□□ -1.12
LINC01220-201ENST00000558575 TMEM254Q8TBM7 123 aa8.01□□□□□ -1.13
LINC01220-201ENST00000558575 MRPL34Q9BQ48 92 aaKnown RBP8□□□□□ -1.13
LINC01220-201ENST00000558575 FLGP20930 4061 aaPredicted RBP7.99□□□□□ -1.13
LINC01220-201ENST00000558575 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
LINC01220-201ENST00000558575 SYNE2Q8WXH0 6885 aaKnown RBP7.98□□□□□ -1.13
LINC01220-201ENST00000558575 M0R2T5 61 aa7.98□□□□□ -1.13
LINC01220-201ENST00000558575 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
LINC01220-201ENST00000558575 FAM240AA0A1B0GVK7 77 aa7.97□□□□□ -1.13
LINC01220-201ENST00000558575 ACYP1P07311 99 aa7.97□□□□□ -1.13
LINC01220-201ENST00000558575 WFDC13Q8IUB5 93 aa7.95□□□□□ -1.14
LINC01220-201ENST00000558575 CXCL6P80162 114 aa7.94□□□□□ -1.14
LINC01220-201ENST00000558575 CASC2Q6XLA1 102 aa7.93□□□□□ -1.14
LINC01220-201ENST00000558575 HCG22E2RYF7 251 aa7.89□□□□□ -1.15
LINC01220-201ENST00000558575 HRES1P13985 223 aa7.89□□□□□ -1.15
LINC01220-201ENST00000558575 MACF1Q9UPN3 7388 aaKnown RBP7.88□□□□□ -1.15
LINC01220-201ENST00000558575 NDUFS5O43920 106 aa7.88□□□□□ -1.15
LINC01220-201ENST00000558575 Q5W150 140 aa7.88□□□□□ -1.15
LINC01220-201ENST00000558575 SPINK7P58062 85 aa7.87□□□□□ -1.15
LINC01220-201ENST00000558575 MPLKIPQ8TAP9 179 aa7.87□□□□□ -1.15
LINC01220-201ENST00000558575 COX6B2Q6YFQ2 88 aa7.85□□□□□ -1.15
LINC01220-201ENST00000558575 LINC00643Q86TS7 51 aa7.82□□□□□ -1.16
LINC01220-201ENST00000558575 ATP5EP2Q5VTU8 51 aa7.81□□□□□ -1.16
LINC01220-201ENST00000558575 KRTAP19-1Q8IUB9 90 aa7.81□□□□□ -1.16
LINC01220-201ENST00000558575 J3QR89 54 aa7.77□□□□□ -1.17
LINC01220-201ENST00000558575 HIST1H4AP62805 103 aaKnown RBP7.75□□□□□ -1.17
LINC01220-201ENST00000558575 RBM12B-AS1Q9P1G2 102 aa7.74□□□□□ -1.17
LINC01220-201ENST00000558575 A0A087WVE0 104 aa7.73□□□□□ -1.17
LINC01220-201ENST00000558575 IGKV2D-30A0A075B6S6 120 aa7.72□□□□□ -1.17
LINC01220-201ENST00000558575 IGKV2-30P06310 120 aa7.72□□□□□ -1.17
LINC01220-201ENST00000558575 KRTAP9-8Q9BYQ0 159 aa7.72□□□□□ -1.17
LINC01220-201ENST00000558575 TP53AIP1Q9HCN2 124 aa7.71□□□□□ -1.18
LINC01220-201ENST00000558575 FAM236DA0A1B0GTK5 79 aa7.7□□□□□ -1.18
LINC01220-201ENST00000558575 FAM236CP0DP71 79 aa7.7□□□□□ -1.18
LINC01220-201ENST00000558575 C7orf65Q6ZTY9 151 aa7.68□□□□□ -1.18
LINC01220-201ENST00000558575 LCE2BO14633 110 aa7.65□□□□□ -1.18
LINC01220-201ENST00000558575 K7ERU9 68 aa7.63□□□□□ -1.19
LINC01220-201ENST00000558575 UQCRQO14949 82 aa7.59□□□□□ -1.19
LINC01220-201ENST00000558575 MT-ATP8P03928 68 aa7.58□□□□□ -1.2
LINC01220-201ENST00000558575 C4orf26Q17RF5 130 aa7.58□□□□□ -1.2
LINC01220-201ENST00000558575 TRAV22A0A0B4J277 110 aa7.57□□□□□ -1.2
LINC01220-201ENST00000558575 OCR1Q9BZK8 76 aa7.57□□□□□ -1.2
LINC01220-201ENST00000558575 KRTAP6-3Q3LI67 103 aa7.56□□□□□ -1.2
LINC01220-201ENST00000558575 CYP4F30PQ9H0H9 118 aa7.56□□□□□ -1.2
LINC01220-201ENST00000558575 NEBP20929 6669 aa7.55□□□□□ -1.2
LINC01220-201ENST00000558575 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
LINC01220-201ENST00000558575 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
LINC01220-201ENST00000558575 MT2AP02795 61 aa7.54□□□□□ -1.2
LINC01220-201ENST00000558575 H0Y9P7 68 aa7.52□□□□□ -1.21
LINC01220-201ENST00000558575 IMUPQ9GZP8 106 aa7.52□□□□□ -1.21
LINC01220-201ENST00000558575 LOC101927531A0A1B0GV80 90 aa7.5□□□□□ -1.21
LINC01220-201ENST00000558575 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
LINC01220-201ENST00000558575 MT1FP04733 61 aa7.49□□□□□ -1.21
LINC01220-201ENST00000558575 ATOX1O00244 68 aa7.47□□□□□ -1.21
LINC01220-201ENST00000558575 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
LINC01220-201ENST00000558575 KRTAP19-6Q3LI70 58 aa7.46□□□□□ -1.22
LINC01220-201ENST00000558575 SCGB1A1P11684 91 aa7.44□□□□□ -1.22
LINC01220-201ENST00000558575 LINC00208Q96KT6 92 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms