RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 WFDC13Q8IUB5 93 aa3.08□□□□□ -1.92
LRRC28-207ENST00000558500 SYS1-DBNDD2H3BUS1 97 aa3.07□□□□□ -1.92
LRRC28-207ENST00000558500 IGKV4-1P06312 121 aa3.07□□□□□ -1.92
LRRC28-207ENST00000558500 ZCCHC13Q8WW36 166 aaKnown RBP3.07□□□□□ -1.92
LRRC28-207ENST00000558500 APOC3P02656 99 aa3.06□□□□□ -1.92
LRRC28-207ENST00000558500 TRGC2P03986 189 aa3.06□□□□□ -1.92
LRRC28-207ENST00000558500 SPRR2EP22531 72 aa3.06□□□□□ -1.92
LRRC28-207ENST00000558500 SPRR2BP35325 72 aa3.06□□□□□ -1.92
LRRC28-207ENST00000558500 SPRR2AP35326 72 aa3.06□□□□□ -1.92
LRRC28-207ENST00000558500 LINC01545Q5VT33 79 aa3.06□□□□□ -1.92
LRRC28-207ENST00000558500 Q5VV11 94 aa3.06□□□□□ -1.92
LRRC28-207ENST00000558500 IGHV6-1A0A0B4J1U7 121 aa3.05□□□□□ -1.92
LRRC28-207ENST00000558500 SNAPINO95295 136 aa3.05□□□□□ -1.92
LRRC28-207ENST00000558500 CXCL6P80162 114 aa3.04□□□□□ -1.92
LRRC28-207ENST00000558500 KRTAP19-8Q3LI54 63 aa3.04□□□□□ -1.92
LRRC28-207ENST00000558500 SVBPQ8N300 66 aa3.04□□□□□ -1.92
LRRC28-207ENST00000558500 DEFB116Q30KQ4 102 aa3.03□□□□□ -1.92
LRRC28-207ENST00000558500 H1FX-AS1Q4G0G2 97 aa3.03□□□□□ -1.92
LRRC28-207ENST00000558500 BVES-AS1Q5T3Y7 98 aa3.03□□□□□ -1.92
LRRC28-207ENST00000558500 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
LRRC28-207ENST00000558500 C12orf57Q99622 126 aa3.03□□□□□ -1.92
LRRC28-207ENST00000558500 C8orf87E5RJ46 101 aa3.02□□□□□ -1.93
LRRC28-207ENST00000558500 H3BMG7 143 aa3.02□□□□□ -1.93
LRRC28-207ENST00000558500 C3orf79P0CE67 100 aa3.02□□□□□ -1.93
LRRC28-207ENST00000558500 LINC00472Q9H8W2 130 aa3.02□□□□□ -1.93
LRRC28-207ENST00000558500 NDUFA5Q16718 116 aa3.01□□□□□ -1.93
LRRC28-207ENST00000558500 RAB37Q96AX2 223 aa3.01□□□□□ -1.93
LRRC28-207ENST00000558500 TRBV7-4A0A0J9YYF1 115 aa3□□□□□ -1.93
LRRC28-207ENST00000558500 A0A1B0GVX0 72 aa3□□□□□ -1.93
LRRC28-207ENST00000558500 MT3P25713 68 aa3□□□□□ -1.93
LRRC28-207ENST00000558500 HIST1H4GQ99525 98 aa3□□□□□ -1.93
LRRC28-207ENST00000558500 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
LRRC28-207ENST00000558500 FAM236AA0A1B0GUQ0 79 aa2.98□□□□□ -1.93
LRRC28-207ENST00000558500 FAM236BA0A1B0GV22 79 aa2.98□□□□□ -1.93
LRRC28-207ENST00000558500 SNCGO76070 127 aa2.97□□□□□ -1.93
LRRC28-207ENST00000558500 FABP2P12104 132 aa2.97□□□□□ -1.93
LRRC28-207ENST00000558500 SPRR2DP22532 72 aa2.97□□□□□ -1.93
LRRC28-207ENST00000558500 ANKRD29Q8N6D5 301 aa2.96□□□□□ -1.94
LRRC28-207ENST00000558500 H0YGX0 51 aa2.95□□□□□ -1.94
LRRC28-207ENST00000558500 KRTDAPP60985 99 aa2.95□□□□□ -1.94
LRRC28-207ENST00000558500 LYRM7Q5U5X0 104 aa2.95□□□□□ -1.94
LRRC28-207ENST00000558500 ATOH7Q8N100 152 aa2.95□□□□□ -1.94
LRRC28-207ENST00000558500 DSCR8Q96T75 97 aa2.95□□□□□ -1.94
LRRC28-207ENST00000558500 IMUPQ9GZP8 106 aa2.95□□□□□ -1.94
LRRC28-207ENST00000558500 IGKV3D-7A0A0C4DH55 119 aa2.94□□□□□ -1.94
LRRC28-207ENST00000558500 TRACP01848 142 aa2.94□□□□□ -1.94
LRRC28-207ENST00000558500 A0A1B0GV72 72 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 A0A1B0GX51 115 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST1H2BKO60814 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 CCKP06307 115 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST1H2BJP06899 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST1H2BOP23527 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST1H2BBP33778 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST1H2BDP58876 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST1H2BCP62807 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST2H2BEQ16778 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 C5orf47Q569G3 176 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.92□□□□□ -1.94
LRRC28-207ENST00000558500 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST1H2BHQ93079 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST1H2BNQ99877 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 HIST1H2BMQ99879 126 aa2.92□□□□□ -1.94
LRRC28-207ENST00000558500 J3KT08 172 aa2.91□□□□□ -1.94
LRRC28-207ENST00000558500 C8orf17Q9NRJ1 99 aa2.9□□□□□ -1.95
LRRC28-207ENST00000558500 NDUFB1O75438 58 aa2.89□□□□□ -1.95
LRRC28-207ENST00000558500 KRTAP10-7P60409 375 aaPredicted RBP2.88□□□□□ -1.95
LRRC28-207ENST00000558500 KLKP1Q107X0 134 aa2.88□□□□□ -1.95
LRRC28-207ENST00000558500 CEND1Q8N111 149 aa2.88□□□□□ -1.95
LRRC28-207ENST00000558500 C2orf91Q6ZV80 131 aa2.87□□□□□ -1.95
LRRC28-207ENST00000558500 VPS25Q9BRG1 176 aa2.87□□□□□ -1.95
LRRC28-207ENST00000558500 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
LRRC28-207ENST00000558500 H3BQ85 93 aa2.86□□□□□ -1.95
LRRC28-207ENST00000558500 COA6Q5JTJ3 125 aaKnown RBP2.86□□□□□ -1.95
LRRC28-207ENST00000558500 CSAG1Q6PB30 78 aa2.86□□□□□ -1.95
LRRC28-207ENST00000558500 ORMDL1Q9P0S3 153 aa2.86□□□□□ -1.95
LRRC28-207ENST00000558500 A0A0B4J2C4 111 aa2.85□□□□□ -1.95
LRRC28-207ENST00000558500 TMEM256-PLSCR3K7ERE1 68 aa2.85□□□□□ -1.95
LRRC28-207ENST00000558500 C4orf26Q17RF5 130 aa2.85□□□□□ -1.95
LRRC28-207ENST00000558500 DNAL4O96015 105 aa2.84□□□□□ -1.95
LRRC28-207ENST00000558500 Q6ZQT0 140 aa2.84□□□□□ -1.95
LRRC28-207ENST00000558500 C7orf65Q6ZTY9 151 aa2.84□□□□□ -1.95
LRRC28-207ENST00000558500 PRO2289Q9P1D8 64 aa2.84□□□□□ -1.95
LRRC28-207ENST00000558500 HSBP1L1C9JCN9 74 aa2.83□□□□□ -1.96
LRRC28-207ENST00000558500 PRR15Q8IV56 129 aa2.83□□□□□ -1.96
LRRC28-207ENST00000558500 TMEM254Q8TBM7 123 aa2.83□□□□□ -1.96
LRRC28-207ENST00000558500 MRPL34Q9BQ48 92 aaKnown RBP2.83□□□□□ -1.96
LRRC28-207ENST00000558500 CRIPTQ9P021 101 aa2.83□□□□□ -1.96
LRRC28-207ENST00000558500 S4R3F8 94 aa2.83□□□□□ -1.96
LRRC28-207ENST00000558500 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
LRRC28-207ENST00000558500 MT1XP80297 61 aa2.82□□□□□ -1.96
LRRC28-207ENST00000558500 RBM3P98179 157 aaKnown RBP2.82□□□□□ -1.96
LRRC28-207ENST00000558500 MMP24-AS1A0A0U1RRL7 71 aa2.81□□□□□ -1.96
LRRC28-207ENST00000558500 NDUFS5O43920 106 aa2.81□□□□□ -1.96
LRRC28-207ENST00000558500 LCA10Q71F78 164 aa2.81□□□□□ -1.96
LRRC28-207ENST00000558500 PRO1854Q9UHT4 67 aa2.81□□□□□ -1.96
LRRC28-207ENST00000558500 Q5W150 140 aa2.8□□□□□ -1.96
LRRC28-207ENST00000558500 COX8AP10176 69 aa2.79□□□□□ -1.96
LRRC28-207ENST00000558500 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
LRRC28-207ENST00000558500 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
LRRC28-207ENST00000558500 hDV103S1A0JD37 113 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms