RNA–Protein interactions for RNA: ENST00000558271.5

LRRC49-209, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-209ENST00000558271 SPRR1BP22528 89 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 SPRR1AP35321 89 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 ASH1LQ9NR48 2969 aaKnown RBP0.48□□□□□ -2.33
LRRC49-209ENST00000558271 CSMD3Q7Z407 3707 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 PRRC2CQ9Y520 2896 aaKnown RBP0.48□□□□□ -2.33
LRRC49-209ENST00000558271 DNAH10Q8IVF4 4471 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 TPRP12270 2363 aaKnown RBP0.48□□□□□ -2.33
LRRC49-209ENST00000558271 WNK1Q9H4A3 2382 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 ASPMQ8IZT6 3477 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 AHCTF1Q8WYP5 2266 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 VCANP13611 3396 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 CELSR2Q9HCU4 2923 aa0.48□□□□□ -2.33
LRRC49-209ENST00000558271 UNC80Q8N2C7 3258 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 CUBNO60494 3623 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 VPS13AQ96RL7 3174 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 TENM2Q9NT68 2774 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 SPTBN1Q01082 2364 aaKnown RBP0.47□□□□□ -2.33
LRRC49-209ENST00000558271 ZDBF2Q9HCK1 2354 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 DCHS1Q96JQ0 3298 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 DNAH8Q96JB1 4490 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 DSPP15924 2871 aaKnown RBP0.47□□□□□ -2.33
LRRC49-209ENST00000558271 LINC01556Q5JQF7 62 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 C5orf42Q9H799 3197 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 BOD1L1Q8NFC6 3051 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 WNK2Q9Y3S1 2297 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 REV3LO60673 3130 aa0.47□□□□□ -2.33
LRRC49-209ENST00000558271 DNAH12Q6ZR08 3092 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 ANK3Q12955 4377 aaKnown RBP0.46□□□□□ -2.34
LRRC49-209ENST00000558271 SPEGQ15772 3267 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 DNAH1Q9P2D7 4330 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 FRAS1Q86XX4 4008 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 SPTBN2O15020 2390 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 LAMA3Q16787 3333 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 SVEP1Q4LDE5 3571 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 INE1O15225 51 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 SPART-AS1P0CW21 52 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 UBR5O95071 2799 aaPredicted RBP0.46□□□□□ -2.34
LRRC49-209ENST00000558271 VPS13BQ7Z7G8 4022 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 KALRNO60229 2985 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 NCOR1O75376 2440 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 CEP250Q9BV73 2442 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 DNAH9Q9NYC9 4486 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 MAP1AP78559 2803 aaPredicted RBP0.46□□□□□ -2.34
LRRC49-209ENST00000558271 FRYQ5TBA9 3013 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 PCNX1Q96RV3 2341 aa0.46□□□□□ -2.34
LRRC49-209ENST00000558271 TEX15Q9BXT5 2789 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 SRRM2Q9UQ35 2752 aaKnown RBP0.45□□□□□ -2.34
LRRC49-209ENST00000558271 LOC400499M0QZD8 3231 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 APOBP04114 4563 aaKnown RBP0.45□□□□□ -2.34
LRRC49-209ENST00000558271 TRANK1O15050 2925 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 DNAH17Q9UFH2 4485 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 HECTD1Q9ULT8 2610 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 SPTBN4Q9H254 2564 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 DEFB124Q8NES8 71 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 FREM2Q5SZK8 3169 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 ROS1P08922 2347 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 MAP1BP46821 2468 aaKnown RBP0.45□□□□□ -2.34
LRRC49-209ENST00000558271 LRBAP50851 2863 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 DMXL2Q8TDJ6 3036 aa0.45□□□□□ -2.34
LRRC49-209ENST00000558271 CNOT1A5YKK6 2376 aaKnown RBP0.45□□□□□ -2.34
LRRC49-209ENST00000558271 TACC2O95359 2948 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 CACNA1BQ00975 2339 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 LAMA1P25391 3075 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 COL12A1Q99715 3063 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 SACSQ9NZJ4 4579 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 EP400Q96L91 3159 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 M0QZ58 72 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 DEFB123Q8N688 67 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 KMT2AQ03164 3969 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 HECTD4Q9Y4D8 3996 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 AKAP6Q13023 2319 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 CELSR1Q9NYQ6 3014 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 CDH23Q9H251 3354 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 NF1P21359 2839 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 HTTP42858 3142 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 ITPR1Q14643 2758 aa0.44□□□□□ -2.34
LRRC49-209ENST00000558271 DMXL1Q9Y485 3027 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 PDZD2O15018 2839 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 ACACAQ13085 2346 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 CSPG4Q6UVK1 2322 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 CSMD2Q7Z408 3487 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 DNAH2Q9P225 4427 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 FBN2P35556 2912 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 DYNC2H1Q8NCM8 4307 aaKnown RBP0.43□□□□□ -2.34
LRRC49-209ENST00000558271 DNAH3Q8TD57 4116 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 ZNF462Q96JM2 2506 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 VWFP04275 2813 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 CMYA5Q8N3K9 4069 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 DNAH7Q8WXX0 4024 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 CCDC168Q8NDH2 2452 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 COL7A1Q02388 2944 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 CREBBPQ92793 2442 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 CELSR3Q9NYQ7 3312 aa0.43□□□□□ -2.34
LRRC49-209ENST00000558271 PLECQ15149 4684 aaKnown RBP0.43□□□□□ -2.34
LRRC49-209ENST00000558271 DCHS2Q6V1P9 2916 aa0.42□□□□□ -2.34
LRRC49-209ENST00000558271 HUWE1Q7Z6Z7 4374 aaKnown RBP0.42□□□□□ -2.34
LRRC49-209ENST00000558271 PKHD1L1Q86WI1 4243 aa0.42□□□□□ -2.34
LRRC49-209ENST00000558271 ZNF469Q96JG9 3925 aaPredicted RBP0.42□□□□□ -2.34
LRRC49-209ENST00000558271 DNAH6Q9C0G6 4158 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms