RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 STAB2Q8WWQ8 2551 aa5.06□□□□□ -1.6
SPG11-209ENST00000558253 NDUFS5O43920 106 aa5.05□□□□□ -1.6
SPG11-209ENST00000558253 SPANXA2-OT1Q8N9U9 137 aa5.05□□□□□ -1.6
SPG11-209ENST00000558253 TP53AIP1Q9HCN2 124 aa5.05□□□□□ -1.6
SPG11-209ENST00000558253 COL7A1Q02388 2944 aa5.04□□□□□ -1.6
SPG11-209ENST00000558253 C1orf64Q8NEQ6 169 aa5.04□□□□□ -1.6
SPG11-209ENST00000558253 MOBPQ13875 183 aa5.03□□□□□ -1.6
SPG11-209ENST00000558253 IGLV9-49A0A0B4J1Y8 123 aa5.02□□□□□ -1.61
SPG11-209ENST00000558253 TRAV22A0A0B4J277 110 aa5.02□□□□□ -1.61
SPG11-209ENST00000558253 A0A0G2JQZ4 141 aa5.02□□□□□ -1.61
SPG11-209ENST00000558253 CDK2AP2O75956 126 aa5.02□□□□□ -1.61
SPG11-209ENST00000558253 IGLV7-43P04211 117 aa5.02□□□□□ -1.61
SPG11-209ENST00000558253 SSBP3-AS1Q7Z2R9 100 aa5.02□□□□□ -1.61
SPG11-209ENST00000558253 LY6G6CO95867 125 aa5.01□□□□□ -1.61
SPG11-209ENST00000558253 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
SPG11-209ENST00000558253 WFDC13Q8IUB5 93 aa5.01□□□□□ -1.61
SPG11-209ENST00000558253 DEFB116Q30KQ4 102 aa5□□□□□ -1.61
SPG11-209ENST00000558253 ASB16-AS1Q495Z4 193 aa5□□□□□ -1.61
SPG11-209ENST00000558253 ATP11AUNQ6ZP68 121 aa5□□□□□ -1.61
SPG11-209ENST00000558253 MMP24-AS1A0A0U1RRL7 71 aa4.98□□□□□ -1.61
SPG11-209ENST00000558253 Q96NJ1 140 aa4.98□□□□□ -1.61
SPG11-209ENST00000558253 A0A1B0GVX0 72 aa4.97□□□□□ -1.61
SPG11-209ENST00000558253 H0Y9P7 68 aa4.97□□□□□ -1.61
SPG11-209ENST00000558253 VPS13DQ5THJ4 4388 aa4.97□□□□□ -1.61
SPG11-209ENST00000558253 Q6ZSA8 131 aa4.96□□□□□ -1.62
SPG11-209ENST00000558253 LINC00208Q96KT6 92 aa4.96□□□□□ -1.62
SPG11-209ENST00000558253 C8orf17Q9NRJ1 99 aa4.96□□□□□ -1.62
SPG11-209ENST00000558253 C8orf87E5RJ46 101 aa4.95□□□□□ -1.62
SPG11-209ENST00000558253 Q75L30 129 aa4.95□□□□□ -1.62
SPG11-209ENST00000558253 PLECQ15149 4684 aaKnown RBP4.94□□□□□ -1.62
SPG11-209ENST00000558253 LOC101927531A0A1B0GV80 90 aa4.94□□□□□ -1.62
SPG11-209ENST00000558253 PSPHP1O15172 72 aa4.94□□□□□ -1.62
SPG11-209ENST00000558253 Q5VV11 94 aa4.94□□□□□ -1.62
SPG11-209ENST00000558253 CIRBP-AS1Q8TBR5 109 aa4.94□□□□□ -1.62
SPG11-209ENST00000558253 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
SPG11-209ENST00000558253 MRPL34Q9BQ48 92 aaKnown RBP4.93□□□□□ -1.62
SPG11-209ENST00000558253 DNAH10Q8IVF4 4471 aa4.93□□□□□ -1.62
SPG11-209ENST00000558253 A8MUN3 132 aa4.92□□□□□ -1.62
SPG11-209ENST00000558253 Q8N9P0 234 aaPredicted RBP4.92□□□□□ -1.62
SPG11-209ENST00000558253 IGHV6-1A0A0B4J1U7 121 aa4.91□□□□□ -1.62
SPG11-209ENST00000558253 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
SPG11-209ENST00000558253 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
SPG11-209ENST00000558253 IGLV7-46A0A075B6I9 117 aa4.9□□□□□ -1.63
SPG11-209ENST00000558253 TENM2Q9NT68 2774 aa4.89□□□□□ -1.63
SPG11-209ENST00000558253 C7orf65Q6ZTY9 151 aa4.89□□□□□ -1.63
SPG11-209ENST00000558253 PRR15LQ9BU68 103 aa4.89□□□□□ -1.63
SPG11-209ENST00000558253 DNAH7Q8WXX0 4024 aa4.89□□□□□ -1.63
SPG11-209ENST00000558253 MEGF8Q7Z7M0 2845 aa4.88□□□□□ -1.63
SPG11-209ENST00000558253 CSMD3Q7Z407 3707 aa4.88□□□□□ -1.63
SPG11-209ENST00000558253 A0A087X002 238 aa4.88□□□□□ -1.63
SPG11-209ENST00000558253 ANAPC11Q9NYG5 84 aa4.88□□□□□ -1.63
SPG11-209ENST00000558253 RBM12B-AS1Q9P1G2 102 aa4.88□□□□□ -1.63
SPG11-209ENST00000558253 STARD9Q9P2P6 4700 aa4.88□□□□□ -1.63
SPG11-209ENST00000558253 PRKDCP78527 4128 aaKnown RBP4.87□□□□□ -1.63
SPG11-209ENST00000558253 A6NED7 52 aa4.87□□□□□ -1.63
SPG11-209ENST00000558253 KRTAP10-1P60331 282 aa4.87□□□□□ -1.63
SPG11-209ENST00000558253 A6NN06 94 aa4.86□□□□□ -1.63
SPG11-209ENST00000558253 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
SPG11-209ENST00000558253 DNAH17Q9UFH2 4485 aa4.85□□□□□ -1.63
SPG11-209ENST00000558253 LCA10Q71F78 164 aa4.85□□□□□ -1.63
SPG11-209ENST00000558253 LINC00313P59037 77 aa4.84□□□□□ -1.63
SPG11-209ENST00000558253 RPS29P62273 56 aaKnown RBP4.84□□□□□ -1.63
SPG11-209ENST00000558253 SPINK6Q6UWN8 80 aa4.84□□□□□ -1.63
SPG11-209ENST00000558253 LYSTQ99698 3801 aa4.83□□□□□ -1.64
SPG11-209ENST00000558253 DNAH6Q9C0G6 4158 aa4.83□□□□□ -1.64
SPG11-209ENST00000558253 SPINK1P00995 79 aa4.83□□□□□ -1.64
SPG11-209ENST00000558253 SPAG11AQ6PDA7 123 aa4.83□□□□□ -1.64
SPG11-209ENST00000558253 SPTSSBQ8NFR3 76 aa4.83□□□□□ -1.64
SPG11-209ENST00000558253 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
SPG11-209ENST00000558253 COA5Q86WW8 74 aa4.82□□□□□ -1.64
SPG11-209ENST00000558253 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
SPG11-209ENST00000558253 KRTAP13-2Q52LG2 175 aa4.81□□□□□ -1.64
SPG11-209ENST00000558253 DNAH2Q9P225 4427 aa4.8□□□□□ -1.64
SPG11-209ENST00000558253 KRTAP1-4P0C5Y4 121 aa4.8□□□□□ -1.64
SPG11-209ENST00000558253 PRR4Q16378 134 aa4.8□□□□□ -1.64
SPG11-209ENST00000558253 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
SPG11-209ENST00000558253 NOTCH2NLQ7Z3S9 236 aa4.79□□□□□ -1.64
SPG11-209ENST00000558253 HECTD4Q9Y4D8 3996 aa4.78□□□□□ -1.64
SPG11-209ENST00000558253 TYMSOSQ8TAI1 123 aa4.78□□□□□ -1.64
SPG11-209ENST00000558253 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
SPG11-209ENST00000558253 PCOTHQ58A44 107 aa4.77□□□□□ -1.65
SPG11-209ENST00000558253 ALMS1Q8TCU4 4167 aa4.77□□□□□ -1.65
SPG11-209ENST00000558253 TGP01266 2768 aa4.76□□□□□ -1.65
SPG11-209ENST00000558253 ACYP2P14621 99 aa4.76□□□□□ -1.65
SPG11-209ENST00000558253 DNHD1Q96M86 4753 aa4.76□□□□□ -1.65
SPG11-209ENST00000558253 Q5W150 140 aa4.74□□□□□ -1.65
SPG11-209ENST00000558253 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
SPG11-209ENST00000558253 KRTAP16-1A8MUX0 517 aa4.73□□□□□ -1.65
SPG11-209ENST00000558253 LINC00304Q8N9R0 145 aa4.73□□□□□ -1.65
SPG11-209ENST00000558253 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
SPG11-209ENST00000558253 KMT2AQ03164 3969 aa4.72□□□□□ -1.65
SPG11-209ENST00000558253 HRES1P13985 223 aa4.71□□□□□ -1.66
SPG11-209ENST00000558253 A0A1B0GVY2 172 aa4.7□□□□□ -1.66
SPG11-209ENST00000558253 PRR26Q8N8Z3 221 aa4.7□□□□□ -1.66
SPG11-209ENST00000558253 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
SPG11-209ENST00000558253 A8MU10 97 aa4.69□□□□□ -1.66
SPG11-209ENST00000558253 DNAH11Q96DT5 4516 aa4.69□□□□□ -1.66
SPG11-209ENST00000558253 DNAH5Q8TE73 4624 aa4.66□□□□□ -1.66
SPG11-209ENST00000558253 LINC01554Q52M75 96 aa4.65□□□□□ -1.67
SPG11-209ENST00000558253 FRAS1Q86XX4 4008 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms