RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 KLK9Q2XQG4 91 aa1.05□□□□□ -2.24
TDP1-217ENST00000557782 KRTAP4-3Q9BYR4 195 aa1.05□□□□□ -2.24
TDP1-217ENST00000557782 ADGRG4Q8IZF6 3080 aa1.05□□□□□ -2.24
TDP1-217ENST00000557782 ACACAQ13085 2346 aa1.05□□□□□ -2.24
TDP1-217ENST00000557782 CACNA1HO95180 2353 aa1.05□□□□□ -2.24
TDP1-217ENST00000557782 DOPEY2Q9Y3R5 2298 aa1.04□□□□□ -2.24
TDP1-217ENST00000557782 SMG1Q96Q15 3661 aaKnown RBP1.04□□□□□ -2.24
TDP1-217ENST00000557782 LINC01549A6NIU2 74 aa1.04□□□□□ -2.24
TDP1-217ENST00000557782 LYNX1G3V0Z9 82 aa1.04□□□□□ -2.24
TDP1-217ENST00000557782 H3BVH4 76 aa1.04□□□□□ -2.24
TDP1-217ENST00000557782 DEFB112Q30KQ8 113 aa1.04□□□□□ -2.24
TDP1-217ENST00000557782 DEFB109BQ30KR1 87 aa1.04□□□□□ -2.24
TDP1-217ENST00000557782 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
TDP1-217ENST00000557782 RPL39LQ96EH5 51 aaKnown RBP1.04□□□□□ -2.24
TDP1-217ENST00000557782 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.04□□□□□ -2.246e-12■■□□□ 13.9
TDP1-217ENST00000557782 PTPRQQ9UMZ3 2332 aa1.04□□□□□ -2.24
TDP1-217ENST00000557782 BSNQ9UPA5 3926 aa1.04□□□□□ -2.24
TDP1-217ENST00000557782 EP300Q09472 2414 aaPredicted RBP1.04□□□□□ -2.24
TDP1-217ENST00000557782 NBEAL2Q6ZNJ1 2754 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 VWFP04275 2813 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 CELSR1Q9NYQ6 3014 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 HIVEP3Q5T1R4 2406 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 IGIPA6NJ69 53 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 M0R1W7 72 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 DEFB1P60022 68 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 RPL39P62891 51 aaKnown RBP1.03□□□□□ -2.24
TDP1-217ENST00000557782 DEFB121Q5J5C9 76 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 DEFB124Q8NES8 71 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 FLNAP21333 2647 aaKnown RBP1.03□□□□□ -2.24
TDP1-217ENST00000557782 RELNP78509 3460 aa1.03□□□□□ -2.24
TDP1-217ENST00000557782 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.25
TDP1-217ENST00000557782 PKD1L1Q8TDX9 2849 aa1.02□□□□□ -2.25
TDP1-217ENST00000557782 CRYBG3Q68DQ2 2970 aa1.02□□□□□ -2.25
TDP1-217ENST00000557782 CSMD1Q96PZ7 3565 aa1.02□□□□□ -2.25
TDP1-217ENST00000557782 TRAV21A0A0B4J279 112 aa1.02□□□□□ -2.25
TDP1-217ENST00000557782 POLR2KP53803 58 aaKnown RBP1.02□□□□□ -2.25
TDP1-217ENST00000557782 MINOS1Q5TGZ0 78 aa1.02□□□□□ -2.25
TDP1-217ENST00000557782 DEFB104AQ8WTQ1 72 aa1.02□□□□□ -2.25
TDP1-217ENST00000557782 DNHD1Q96M86 4753 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 CELSR2Q9HCU4 2923 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 ITPR1Q14643 2758 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 A8MTW9 85 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 M0QY20 66 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 NDUFA4O00483 81 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 NDUFB1O75438 58 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 ATP5EP2Q5VTU8 51 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 Q8IZM0 81 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 USMG5Q96IX5 58 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 IGF2RP11717 2491 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 F8P00451 2351 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 TENM4Q6N022 2769 aa1.01□□□□□ -2.25
TDP1-217ENST00000557782 AKAP6Q13023 2319 aa1□□□□□ -2.25
TDP1-217ENST00000557782 USP9YO00507 2555 aaPredicted RBP1□□□□□ -2.25
TDP1-217ENST00000557782 H3BUA1 57 aa1□□□□□ -2.25
TDP1-217ENST00000557782 I3L3M4 83 aa1□□□□□ -2.25
TDP1-217ENST00000557782 NDUFA1O15239 70 aa1□□□□□ -2.25
TDP1-217ENST00000557782 ATXN8Q156A1 80 aa1□□□□□ -2.25
TDP1-217ENST00000557782 RHPN1-AS1Q9BWJ2 59 aa1□□□□□ -2.25
TDP1-217ENST00000557782 COL12A1Q99715 3063 aa1□□□□□ -2.25
TDP1-217ENST00000557782 NBASA2RRP1 2371 aa1□□□□□ -2.25
TDP1-217ENST00000557782 ZANQ9Y493 2812 aa1□□□□□ -2.25
TDP1-217ENST00000557782 UTP20O75691 2785 aaKnown RBP0.99□□□□□ -2.25
TDP1-217ENST00000557782 H3BUX3 64 aa0.99□□□□□ -2.25
TDP1-217ENST00000557782 LINC00308Q8TCZ7 52 aa0.99□□□□□ -2.25
TDP1-217ENST00000557782 CDKN2A-AS1Q9UH64 79 aa0.99□□□□□ -2.25
TDP1-217ENST00000557782 TLN2Q9Y4G6 2542 aa0.99□□□□□ -2.25
TDP1-217ENST00000557782 MXRA5Q9NR99 2828 aa0.99□□□□□ -2.25
TDP1-217ENST00000557782 NF1P21359 2839 aa0.98□□□□□ -2.25
TDP1-217ENST00000557782 MAP1AP78559 2803 aaPredicted RBP0.98□□□□□ -2.25
TDP1-217ENST00000557782 WNK1Q9H4A3 2382 aa0.98□□□□□ -2.25
TDP1-217ENST00000557782 LAMA5O15230 3695 aa0.98□□□□□ -2.25
TDP1-217ENST00000557782 CSPG4Q6UVK1 2322 aa0.98□□□□□ -2.25
TDP1-217ENST00000557782 KRTAP5-2Q701N4 177 aa0.98□□□□□ -2.25
TDP1-217ENST00000557782 WFDC9Q8NEX5 89 aa0.98□□□□□ -2.25
TDP1-217ENST00000557782 CRIPTQ9P021 101 aa0.98□□□□□ -2.25
TDP1-217ENST00000557782 AKAP9Q99996 3911 aa0.97□□□□□ -2.25
TDP1-217ENST00000557782 TENM1Q9UKZ4 2725 aa0.97□□□□□ -2.25
TDP1-217ENST00000557782 VPS13CQ709C8 3753 aa0.97□□□□□ -2.25
TDP1-217ENST00000557782 DEFB131AP59861 70 aa0.97□□□□□ -2.25
TDP1-217ENST00000557782 UBR4Q5T4S7 5183 aa0.97□□□□□ -2.25
TDP1-217ENST00000557782 APCP25054 2843 aa0.96□□□□□ -2.26
TDP1-217ENST00000557782 K7EQZ3 153 aa0.96□□□□□ -2.26
TDP1-217ENST00000557782 COX7BP24311 80 aa0.96□□□□□ -2.26
TDP1-217ENST00000557782 DEFB136Q30KP8 78 aa0.96□□□□□ -2.26
TDP1-217ENST00000557782 RYR3Q15413 4870 aa0.96□□□□□ -2.26
TDP1-217ENST00000557782 NIPBLQ6KC79 2804 aaeCLIP0.96□□□□□ -2.26
TDP1-217ENST00000557782 PCLOQ9Y6V0 5065 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 GPR98Q8WXG9 6306 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 BIRC6Q9NR09 4857 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 HTN1P15515 57 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 DEFB114Q30KQ6 69 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 TOMM7Q9P0U1 55 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 MGAM2Q2M2H8 2515 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 HIVEP1P15822 2718 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 CENPEQ02224 2701 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 SVEP1Q4LDE5 3571 aa0.95□□□□□ -2.26
TDP1-217ENST00000557782 H0YGX0 51 aa0.94□□□□□ -2.26
TDP1-217ENST00000557782 LINC00158P58513 81 aa0.94□□□□□ -2.26
TDP1-217ENST00000557782 CLPSL2Q6UWE3 100 aa0.94□□□□□ -2.26
TDP1-217ENST00000557782 NOP10Q9NPE3 64 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms