RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 A0A087X002 238 aa7.04□□□□□ -1.28
VIPAS39-211ENST00000557658 IGLV5-52A0A0A0MRZ9 124 aa7.04□□□□□ -1.28
VIPAS39-211ENST00000557658 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
VIPAS39-211ENST00000557658 ANAPC11Q9NYG5 84 aa7.03□□□□□ -1.28
VIPAS39-211ENST00000557658 NUPR2A6NF83 97 aa7.02□□□□□ -1.29
VIPAS39-211ENST00000557658 ZNF861PO60384 105 aa7.02□□□□□ -1.29
VIPAS39-211ENST00000557658 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
VIPAS39-211ENST00000557658 A0A087WTM6 91 aa7.01□□□□□ -1.29
VIPAS39-211ENST00000557658 A6NN06 94 aa7□□□□□ -1.29
VIPAS39-211ENST00000557658 RTL8CO15255 209 aa6.99□□□□□ -1.29
VIPAS39-211ENST00000557658 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
VIPAS39-211ENST00000557658 SPINK7P58062 85 aa6.97□□□□□ -1.29
VIPAS39-211ENST00000557658 Q5W150 140 aa6.97□□□□□ -1.29
VIPAS39-211ENST00000557658 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
VIPAS39-211ENST00000557658 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.29
VIPAS39-211ENST00000557658 PRR26Q8N8Z3 221 aa6.95□□□□□ -1.3
VIPAS39-211ENST00000557658 ACYP2P14621 99 aa6.94□□□□□ -1.3
VIPAS39-211ENST00000557658 VPS13DQ5THJ4 4388 aa6.94□□□□□ -1.3
VIPAS39-211ENST00000557658 HECTD4Q9Y4D8 3996 aa6.93□□□□□ -1.3
VIPAS39-211ENST00000557658 C8orf87E5RJ46 101 aa6.93□□□□□ -1.3
VIPAS39-211ENST00000557658 CIRBP-AS1Q8TBR5 109 aa6.93□□□□□ -1.3
VIPAS39-211ENST00000557658 IGLV7-43P04211 117 aa6.91□□□□□ -1.3
VIPAS39-211ENST00000557658 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
VIPAS39-211ENST00000557658 RBM12B-AS1Q9P1G2 102 aa6.91□□□□□ -1.3
VIPAS39-211ENST00000557658 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.3
VIPAS39-211ENST00000557658 DNAH17Q9UFH2 4485 aa6.9□□□□□ -1.31
VIPAS39-211ENST00000557658 FRAS1Q86XX4 4008 aa6.9□□□□□ -1.31
VIPAS39-211ENST00000557658 SSBP3-AS1Q7Z2R9 100 aa6.89□□□□□ -1.31
VIPAS39-211ENST00000557658 DMAC1Q96GE9 116 aa6.88□□□□□ -1.31
VIPAS39-211ENST00000557658 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
VIPAS39-211ENST00000557658 LINC00313P59037 77 aa6.86□□□□□ -1.31
VIPAS39-211ENST00000557658 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
VIPAS39-211ENST00000557658 IGKV2-30P06310 120 aa6.82□□□□□ -1.32
VIPAS39-211ENST00000557658 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
VIPAS39-211ENST00000557658 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
VIPAS39-211ENST00000557658 A0A1B0GU69 56 aa6.81□□□□□ -1.32
VIPAS39-211ENST00000557658 C1orf134Q5TEV5 83 aa6.81□□□□□ -1.32
VIPAS39-211ENST00000557658 PRKDCP78527 4128 aaKnown RBP6.8□□□□□ -1.32
VIPAS39-211ENST00000557658 KMT2AQ03164 3969 aa6.77□□□□□ -1.33
VIPAS39-211ENST00000557658 KRTAP13-2Q52LG2 175 aa6.75□□□□□ -1.33
VIPAS39-211ENST00000557658 FBN3Q75N90 2809 aa6.75□□□□□ -1.33
VIPAS39-211ENST00000557658 MEGF8Q7Z7M0 2845 aa6.75□□□□□ -1.33
VIPAS39-211ENST00000557658 KRTAP16-1A8MUX0 517 aa6.74□□□□□ -1.33
VIPAS39-211ENST00000557658 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
VIPAS39-211ENST00000557658 TGP01266 2768 aa6.72□□□□□ -1.33
VIPAS39-211ENST00000557658 IGKV2D-30A0A075B6S6 120 aa6.71□□□□□ -1.33
VIPAS39-211ENST00000557658 UQCR11O14957 56 aa6.71□□□□□ -1.33
VIPAS39-211ENST00000557658 DNAH11Q96DT5 4516 aa6.71□□□□□ -1.34
VIPAS39-211ENST00000557658 MIR22HGQ0VDD5 57 aa6.7□□□□□ -1.34
VIPAS39-211ENST00000557658 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
VIPAS39-211ENST00000557658 LY6G6CO95867 125 aa6.68□□□□□ -1.34
VIPAS39-211ENST00000557658 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
VIPAS39-211ENST00000557658 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
VIPAS39-211ENST00000557658 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
VIPAS39-211ENST00000557658 DNAH6Q9C0G6 4158 aa6.66□□□□□ -1.34
VIPAS39-211ENST00000557658 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
VIPAS39-211ENST00000557658 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
VIPAS39-211ENST00000557658 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
VIPAS39-211ENST00000557658 Q6ZSA8 131 aa6.63□□□□□ -1.35
VIPAS39-211ENST00000557658 KRTAP10-1P60331 282 aa6.61□□□□□ -1.35
VIPAS39-211ENST00000557658 SPINK1P00995 79 aa6.59□□□□□ -1.36
VIPAS39-211ENST00000557658 TYMSOSQ8TAI1 123 aa6.58□□□□□ -1.36
VIPAS39-211ENST00000557658 LRP1BQ9NZR2 4599 aa6.58□□□□□ -1.36
VIPAS39-211ENST00000557658 Q8N1X5 172 aa6.55□□□□□ -1.36
VIPAS39-211ENST00000557658 LINC01554Q52M75 96 aa6.54□□□□□ -1.36
VIPAS39-211ENST00000557658 PKD1P98161 4303 aa6.52□□□□□ -1.37
VIPAS39-211ENST00000557658 VPS13BQ7Z7G8 4022 aa6.51□□□□□ -1.37
VIPAS39-211ENST00000557658 RPS29P62273 56 aaKnown RBP6.49□□□□□ -1.37
VIPAS39-211ENST00000557658 LINC00304Q8N9R0 145 aa6.49□□□□□ -1.37
VIPAS39-211ENST00000557658 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
VIPAS39-211ENST00000557658 FAT2Q9NYQ8 4349 aa6.46□□□□□ -1.38
VIPAS39-211ENST00000557658 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
VIPAS39-211ENST00000557658 H0YAA0 97 aa6.42□□□□□ -1.38
VIPAS39-211ENST00000557658 A8MUU9 505 aa6.41□□□□□ -1.38
VIPAS39-211ENST00000557658 C20orf166-AS1Q96NR2 134 aa6.4□□□□□ -1.38
VIPAS39-211ENST00000557658 HYDINQ4G0P3 5121 aa6.4□□□□□ -1.39
VIPAS39-211ENST00000557658 A0A1B0GU33 70 aa6.39□□□□□ -1.39
VIPAS39-211ENST00000557658 SACSQ9NZJ4 4579 aa6.39□□□□□ -1.39
VIPAS39-211ENST00000557658 C9orf92A6NGG3 77 aa6.39□□□□□ -1.39
VIPAS39-211ENST00000557658 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
VIPAS39-211ENST00000557658 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
VIPAS39-211ENST00000557658 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
VIPAS39-211ENST00000557658 KRTAP25-1Q3LHN0 102 aa6.29□□□□□ -1.4
VIPAS39-211ENST00000557658 SMR3BP02814 79 aaPredicted RBP6.29□□□□□ -1.4
VIPAS39-211ENST00000557658 PKHD1L1Q86WI1 4243 aa6.28□□□□□ -1.4
VIPAS39-211ENST00000557658 COX6B2Q6YFQ2 88 aa6.27□□□□□ -1.41
VIPAS39-211ENST00000557658 K7ERS5 55 aa6.26□□□□□ -1.41
VIPAS39-211ENST00000557658 PKHD1P08F94 4074 aa6.25□□□□□ -1.41
VIPAS39-211ENST00000557658 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
VIPAS39-211ENST00000557658 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
VIPAS39-211ENST00000557658 KRTAP10-4P60372 401 aaPredicted RBP6.2□□□□□ -1.42
VIPAS39-211ENST00000557658 FAT1Q14517 4588 aa6.17□□□□□ -1.42
VIPAS39-211ENST00000557658 H3BS24 57 aa6.15□□□□□ -1.42
VIPAS39-211ENST00000557658 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
VIPAS39-211ENST00000557658 ROMO1P60602 79 aa6.13□□□□□ -1.43
VIPAS39-211ENST00000557658 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
VIPAS39-211ENST00000557658 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
VIPAS39-211ENST00000557658 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
VIPAS39-211ENST00000557658 KRTAP10-6P60371 365 aaPredicted RBP6.1□□□□□ -1.43
VIPAS39-211ENST00000557658 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms