RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 DSCR8Q96T75 97 aa6.76□□□□□ -1.33
SLIRP-211ENST00000557623 TRBV20-1A0A075B6N2 111 aa6.75□□□□□ -1.33
SLIRP-211ENST00000557623 MUC2Q02817 5179 aa6.74□□□□□ -1.33
SLIRP-211ENST00000557623 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
SLIRP-211ENST00000557623 PCOTHQ58A44 107 aa6.74□□□□□ -1.33
SLIRP-211ENST00000557623 Q96NJ1 140 aa6.73□□□□□ -1.33
SLIRP-211ENST00000557623 C9JAW5 83 aa6.72□□□□□ -1.33
SLIRP-211ENST00000557623 JMJD7-PLA2G4BH0Y9G9 81 aa6.72□□□□□ -1.33
SLIRP-211ENST00000557623 OBSCN-AS1Q96MR7 158 aa6.72□□□□□ -1.33
SLIRP-211ENST00000557623 VPS25Q9BRG1 176 aa6.72□□□□□ -1.33
SLIRP-211ENST00000557623 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
SLIRP-211ENST00000557623 TAX1BP3O14907 124 aa6.69□□□□□ -1.34
SLIRP-211ENST00000557623 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
SLIRP-211ENST00000557623 SIGMAR1Q99720 223 aa6.69□□□□□ -1.34
SLIRP-211ENST00000557623 A0A1W2PPM0 123 aa6.68□□□□□ -1.34
SLIRP-211ENST00000557623 PDE6GP18545 87 aa6.68□□□□□ -1.34
SLIRP-211ENST00000557623 Q75L30 129 aa6.68□□□□□ -1.34
SLIRP-211ENST00000557623 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
SLIRP-211ENST00000557623 LOC110117498A0A087WWA1 95 aa6.66□□□□□ -1.34
SLIRP-211ENST00000557623 A0A1B0GW54 56 aa6.66□□□□□ -1.34
SLIRP-211ENST00000557623 ATP11AUNQ6ZP68 121 aa6.65□□□□□ -1.34
SLIRP-211ENST00000557623 Q6ZQT0 140 aa6.65□□□□□ -1.34
SLIRP-211ENST00000557623 H3BT86 120 aa6.64□□□□□ -1.35
SLIRP-211ENST00000557623 DSCR10P59022 87 aa6.63□□□□□ -1.35
SLIRP-211ENST00000557623 LINC00313P59037 77 aa6.63□□□□□ -1.35
SLIRP-211ENST00000557623 DEFB116Q30KQ4 102 aa6.63□□□□□ -1.35
SLIRP-211ENST00000557623 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
SLIRP-211ENST00000557623 J3KT08 172 aa6.62□□□□□ -1.35
SLIRP-211ENST00000557623 COL5A1-AS1Q5SY13 56 aa6.62□□□□□ -1.35
SLIRP-211ENST00000557623 C14orf132Q9NPU4 83 aa6.62□□□□□ -1.35
SLIRP-211ENST00000557623 A8MUU9 505 aa6.61□□□□□ -1.35
SLIRP-211ENST00000557623 SPCS1Q9Y6A9 102 aa6.6□□□□□ -1.35
SLIRP-211ENST00000557623 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
SLIRP-211ENST00000557623 IGHV6-1A0A0B4J1U7 121 aa6.58□□□□□ -1.36
SLIRP-211ENST00000557623 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
SLIRP-211ENST00000557623 A0A1B0GVX0 72 aa6.57□□□□□ -1.36
SLIRP-211ENST00000557623 MTURNQ8N3F0 131 aa6.57□□□□□ -1.36
SLIRP-211ENST00000557623 KRTAP16-1A8MUX0 517 aa6.56□□□□□ -1.36
SLIRP-211ENST00000557623 NDUFB1O75438 58 aa6.56□□□□□ -1.36
SLIRP-211ENST00000557623 NOTCH2NLQ7Z3S9 236 aa6.55□□□□□ -1.36
SLIRP-211ENST00000557623 NREPQ16612 68 aa6.54□□□□□ -1.36
SLIRP-211ENST00000557623 KRTAP19-2Q3LHN2 52 aa6.53□□□□□ -1.36
SLIRP-211ENST00000557623 PCP4L1A6NKN8 68 aa6.52□□□□□ -1.37
SLIRP-211ENST00000557623 A8MWP4 228 aa6.52□□□□□ -1.37
SLIRP-211ENST00000557623 K7EP34 96 aa6.51□□□□□ -1.37
SLIRP-211ENST00000557623 COX6B2Q6YFQ2 88 aa6.5□□□□□ -1.37
SLIRP-211ENST00000557623 GTF2H5Q6ZYL4 71 aa6.48□□□□□ -1.37
SLIRP-211ENST00000557623 IGKV3D-7A0A0C4DH55 119 aa6.47□□□□□ -1.37
SLIRP-211ENST00000557623 C8orf17Q9NRJ1 99 aa6.47□□□□□ -1.37
SLIRP-211ENST00000557623 PRO0461Q9UI25 63 aa6.47□□□□□ -1.37
SLIRP-211ENST00000557623 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
SLIRP-211ENST00000557623 MT1HP80294 61 aa6.45□□□□□ -1.38
SLIRP-211ENST00000557623 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-211ENST00000557623 BPY2O14599 106 aa6.43□□□□□ -1.38
SLIRP-211ENST00000557623 F8W1H4 67 aa6.42□□□□□ -1.38
SLIRP-211ENST00000557623 Q6ZVQ6 151 aa6.42□□□□□ -1.38
SLIRP-211ENST00000557623 ZCCHC13Q8WW36 166 aaKnown RBP6.42□□□□□ -1.38
SLIRP-211ENST00000557623 MMP24-AS1A0A0U1RRL7 71 aa6.39□□□□□ -1.39
SLIRP-211ENST00000557623 K7EQZ3 153 aa6.39□□□□□ -1.39
SLIRP-211ENST00000557623 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
SLIRP-211ENST00000557623 M0R2T5 61 aa6.38□□□□□ -1.39
SLIRP-211ENST00000557623 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
SLIRP-211ENST00000557623 UBL5Q9BZL1 73 aa6.38□□□□□ -1.39
SLIRP-211ENST00000557623 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
SLIRP-211ENST00000557623 LINC00846Q9NV44 126 aa6.36□□□□□ -1.39
SLIRP-211ENST00000557623 RBM12B-AS1Q9P1G2 102 aa6.36□□□□□ -1.39
SLIRP-211ENST00000557623 FAM236DA0A1B0GTK5 79 aa6.34□□□□□ -1.39
SLIRP-211ENST00000557623 FAM236CP0DP71 79 aa6.34□□□□□ -1.39
SLIRP-211ENST00000557623 HRES1P13985 223 aa6.34□□□□□ -1.39
SLIRP-211ENST00000557623 ETDBQ3ZM63 59 aa6.34□□□□□ -1.39
SLIRP-211ENST00000557623 NDUFS5O43920 106 aa6.32□□□□□ -1.4
SLIRP-211ENST00000557623 SPINK7P58062 85 aa6.32□□□□□ -1.4
SLIRP-211ENST00000557623 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-211ENST00000557623 MPLKIPQ8TAP9 179 aa6.31□□□□□ -1.4
SLIRP-211ENST00000557623 CASC2Q6XLA1 102 aa6.3□□□□□ -1.4
SLIRP-211ENST00000557623 Q8N9L7 120 aa6.3□□□□□ -1.4
SLIRP-211ENST00000557623 WFDC13Q8IUB5 93 aa6.29□□□□□ -1.4
SLIRP-211ENST00000557623 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-211ENST00000557623 CXCL6P80162 114 aa6.26□□□□□ -1.41
SLIRP-211ENST00000557623 HCG22E2RYF7 251 aa6.25□□□□□ -1.41
SLIRP-211ENST00000557623 ACYP1P07311 99 aa6.24□□□□□ -1.41
SLIRP-211ENST00000557623 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
SLIRP-211ENST00000557623 FAM240AA0A1B0GVK7 77 aa6.2□□□□□ -1.42
SLIRP-211ENST00000557623 Q5W150 140 aa6.2□□□□□ -1.42
SLIRP-211ENST00000557623 C7orf65Q6ZTY9 151 aa6.19□□□□□ -1.42
SLIRP-211ENST00000557623 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
SLIRP-211ENST00000557623 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
SLIRP-211ENST00000557623 A0A1B0GV90 55 aa6.16□□□□□ -1.42
SLIRP-211ENST00000557623 TP53AIP1Q9HCN2 124 aa6.16□□□□□ -1.42
SLIRP-211ENST00000557623 ATP5EP2Q5VTU8 51 aa6.15□□□□□ -1.42
SLIRP-211ENST00000557623 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
SLIRP-211ENST00000557623 H1FX-AS1Q4G0G2 97 aa6.1□□□□□ -1.43
SLIRP-211ENST00000557623 HIST1H4AP62805 103 aaKnown RBP6.08□□□□□ -1.44
SLIRP-211ENST00000557623 LINC00643Q86TS7 51 aa6.08□□□□□ -1.44
SLIRP-211ENST00000557623 J3QR89 54 aa6.05□□□□□ -1.44
SLIRP-211ENST00000557623 MT2AP02795 61 aa6.05□□□□□ -1.44
SLIRP-211ENST00000557623 C4orf26Q17RF5 130 aa6.05□□□□□ -1.44
SLIRP-211ENST00000557623 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
SLIRP-211ENST00000557623 TRAV22A0A0B4J277 110 aa6.01□□□□□ -1.45
SLIRP-211ENST00000557623 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms