RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SIGMAR1Q99720 223 aa7.01□□□□□ -1.29
SLIRP-210ENST00000557431 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
SLIRP-210ENST00000557431 HRES1P13985 223 aa6.99□□□□□ -1.29
SLIRP-210ENST00000557431 NAA38Q9BRA0 125 aaKnown RBP6.99□□□□□ -1.29
SLIRP-210ENST00000557431 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
SLIRP-210ENST00000557431 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
SLIRP-210ENST00000557431 CCKP06307 115 aa6.96□□□□□ -1.3
SLIRP-210ENST00000557431 RBM3P98179 157 aaKnown RBP6.96□□□□□ -1.3
SLIRP-210ENST00000557431 ATXN8Q156A1 80 aa6.96□□□□□ -1.3
SLIRP-210ENST00000557431 MPLKIPQ8TAP9 179 aa6.96□□□□□ -1.3
SLIRP-210ENST00000557431 BATFQ16520 125 aa6.95□□□□□ -1.3
SLIRP-210ENST00000557431 LINC00313P59037 77 aa6.93□□□□□ -1.3
SLIRP-210ENST00000557431 DEFB116Q30KQ4 102 aa6.93□□□□□ -1.3
SLIRP-210ENST00000557431 DSCR8Q96T75 97 aa6.93□□□□□ -1.3
SLIRP-210ENST00000557431 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
SLIRP-210ENST00000557431 IGKV4-1P06312 121 aa6.92□□□□□ -1.3
SLIRP-210ENST00000557431 LYRM7Q5U5X0 104 aa6.91□□□□□ -1.3
SLIRP-210ENST00000557431 MACF1Q9UPN3 7388 aaKnown RBP6.91□□□□□ -1.3
SLIRP-210ENST00000557431 C9JAW5 83 aa6.9□□□□□ -1.3
SLIRP-210ENST00000557431 VPS25Q9BRG1 176 aa6.9□□□□□ -1.3
SLIRP-210ENST00000557431 LINC00472Q9H8W2 130 aa6.9□□□□□ -1.3
SLIRP-210ENST00000557431 C9orf118A6NHY6 69 aa6.88□□□□□ -1.31
SLIRP-210ENST00000557431 JMJD7-PLA2G4BH0Y9G9 81 aa6.88□□□□□ -1.31
SLIRP-210ENST00000557431 TAX1BP3O14907 124 aa6.87□□□□□ -1.31
SLIRP-210ENST00000557431 C21orf62-AS1Q17RA5 79 aa6.86□□□□□ -1.31
SLIRP-210ENST00000557431 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
SLIRP-210ENST00000557431 KRTAP19-6Q3LI70 58 aa6.85□□□□□ -1.31
SLIRP-210ENST00000557431 Q6ZQT0 140 aa6.85□□□□□ -1.31
SLIRP-210ENST00000557431 SYNE2Q8WXH0 6885 aaKnown RBP6.85□□□□□ -1.31
SLIRP-210ENST00000557431 LOC110117498A0A087WWA1 95 aa6.84□□□□□ -1.31
SLIRP-210ENST00000557431 A0A1W2PPM0 123 aa6.84□□□□□ -1.31
SLIRP-210ENST00000557431 PDE6GP18545 87 aa6.83□□□□□ -1.32
SLIRP-210ENST00000557431 A0A1B0GW54 56 aa6.82□□□□□ -1.32
SLIRP-210ENST00000557431 C14orf132Q9NPU4 83 aa6.81□□□□□ -1.32
SLIRP-210ENST00000557431 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
SLIRP-210ENST00000557431 H3BT86 120 aa6.79□□□□□ -1.32
SLIRP-210ENST00000557431 J3KT08 172 aa6.79□□□□□ -1.32
SLIRP-210ENST00000557431 Q8N9P0 234 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-210ENST00000557431 C8orf87E5RJ46 101 aa6.77□□□□□ -1.33
SLIRP-210ENST00000557431 MTURNQ8N3F0 131 aa6.77□□□□□ -1.33
SLIRP-210ENST00000557431 SPINK7P58062 85 aa6.76□□□□□ -1.33
SLIRP-210ENST00000557431 LINC00846Q9NV44 126 aa6.76□□□□□ -1.33
SLIRP-210ENST00000557431 ZCCHC13Q8WW36 166 aaKnown RBP6.75□□□□□ -1.33
SLIRP-210ENST00000557431 COL5A1-AS1Q5SY13 56 aa6.74□□□□□ -1.33
SLIRP-210ENST00000557431 SPCS1Q9Y6A9 102 aa6.74□□□□□ -1.33
SLIRP-210ENST00000557431 NDUFB1O75438 58 aa6.73□□□□□ -1.33
SLIRP-210ENST00000557431 WFDC13Q8IUB5 93 aa6.72□□□□□ -1.33
SLIRP-210ENST00000557431 A8MWP4 228 aa6.71□□□□□ -1.34
SLIRP-210ENST00000557431 NREPQ16612 68 aa6.71□□□□□ -1.34
SLIRP-210ENST00000557431 KRTAP6-3Q3LI67 103 aa6.7□□□□□ -1.34
SLIRP-210ENST00000557431 IGKV3D-7A0A0C4DH55 119 aa6.69□□□□□ -1.34
SLIRP-210ENST00000557431 SMCPP49901 116 aaPredicted RBP6.68□□□□□ -1.34
SLIRP-210ENST00000557431 PCP4L1A6NKN8 68 aa6.67□□□□□ -1.34
SLIRP-210ENST00000557431 C8orf17Q9NRJ1 99 aa6.67□□□□□ -1.34
SLIRP-210ENST00000557431 K7EP34 96 aa6.66□□□□□ -1.34
SLIRP-210ENST00000557431 PRR15Q8IV56 129 aa6.66□□□□□ -1.34
SLIRP-210ENST00000557431 PRO0461Q9UI25 63 aa6.65□□□□□ -1.34
SLIRP-210ENST00000557431 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
SLIRP-210ENST00000557431 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
SLIRP-210ENST00000557431 Q6ZVQ6 151 aa6.61□□□□□ -1.35
SLIRP-210ENST00000557431 MMP24-AS1A0A0U1RRL7 71 aa6.6□□□□□ -1.35
SLIRP-210ENST00000557431 K7EQZ3 153 aa6.59□□□□□ -1.35
SLIRP-210ENST00000557431 BPY2O14599 106 aa6.59□□□□□ -1.35
SLIRP-210ENST00000557431 GTF2H5Q6ZYL4 71 aa6.59□□□□□ -1.35
SLIRP-210ENST00000557431 TMEM254Q8TBM7 123 aa6.58□□□□□ -1.36
SLIRP-210ENST00000557431 MRPL34Q9BQ48 92 aaKnown RBP6.57□□□□□ -1.36
SLIRP-210ENST00000557431 hDV103S1A0JD37 113 aa6.55□□□□□ -1.36
SLIRP-210ENST00000557431 F8W1H4 67 aa6.55□□□□□ -1.36
SLIRP-210ENST00000557431 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
SLIRP-210ENST00000557431 Q8N9L7 120 aa6.52□□□□□ -1.37
SLIRP-210ENST00000557431 UBL5Q9BZL1 73 aa6.52□□□□□ -1.37
SLIRP-210ENST00000557431 NDUFS5O43920 106 aa6.5□□□□□ -1.37
SLIRP-210ENST00000557431 ETDBQ3ZM63 59 aa6.5□□□□□ -1.37
SLIRP-210ENST00000557431 CASC2Q6XLA1 102 aa6.48□□□□□ -1.37
SLIRP-210ENST00000557431 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.37
SLIRP-210ENST00000557431 NEBP20929 6669 aa6.46□□□□□ -1.38
SLIRP-210ENST00000557431 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
SLIRP-210ENST00000557431 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
SLIRP-210ENST00000557431 A6NN06 94 aa6.44□□□□□ -1.38
SLIRP-210ENST00000557431 HCG22E2RYF7 251 aa6.43□□□□□ -1.38
SLIRP-210ENST00000557431 MT1BP07438 61 aa6.43□□□□□ -1.38
SLIRP-210ENST00000557431 Q5W150 140 aa6.43□□□□□ -1.38
SLIRP-210ENST00000557431 CXCL6P80162 114 aa6.4□□□□□ -1.38
SLIRP-210ENST00000557431 KRTAP20-1Q3LI63 56 aa6.4□□□□□ -1.38
SLIRP-210ENST00000557431 FAM236AA0A1B0GUQ0 79 aa6.38□□□□□ -1.39
SLIRP-210ENST00000557431 FAM236BA0A1B0GV22 79 aa6.38□□□□□ -1.39
SLIRP-210ENST00000557431 A0A1B0GV90 55 aa6.38□□□□□ -1.39
SLIRP-210ENST00000557431 C5orf47Q569G3 176 aa6.38□□□□□ -1.39
SLIRP-210ENST00000557431 C4orf26Q17RF5 130 aa6.37□□□□□ -1.39
SLIRP-210ENST00000557431 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
SLIRP-210ENST00000557431 ACYP1P07311 99 aa6.35□□□□□ -1.39
SLIRP-210ENST00000557431 Q5VV11 94 aa6.34□□□□□ -1.39
SLIRP-210ENST00000557431 FAM240AA0A1B0GVK7 77 aa6.32□□□□□ -1.4
SLIRP-210ENST00000557431 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
SLIRP-210ENST00000557431 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
SLIRP-210ENST00000557431 TP53AIP1Q9HCN2 124 aa6.3□□□□□ -1.4
SLIRP-210ENST00000557431 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
SLIRP-210ENST00000557431 KRTAP3-1Q9BYR8 98 aa6.27□□□□□ -1.41
SLIRP-210ENST00000557431 KRTAP5-9P26371 169 aa6.26□□□□□ -1.41
SLIRP-210ENST00000557431 ATP5EP2Q5VTU8 51 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms