RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 PMAIP1Q13794 54 aa2.15□□□□□ -2.07
SCFD1-223ENST00000557076 BATFQ16520 125 aa2.15□□□□□ -2.07
SCFD1-223ENST00000557076 OCIAD2Q56VL3 154 aa2.15□□□□□ -2.07
SCFD1-223ENST00000557076 SOSTDC1Q6X4U4 206 aa2.15□□□□□ -2.07
SCFD1-223ENST00000557076 TCTE3Q8IZS6 198 aa2.15□□□□□ -2.07
SCFD1-223ENST00000557076 A0A1B0GX51 115 aa2.14□□□□□ -2.07
SCFD1-223ENST00000557076 MT1BP07438 61 aa2.14□□□□□ -2.07
SCFD1-223ENST00000557076 Q6JHZ5 121 aa2.14□□□□□ -2.07
SCFD1-223ENST00000557076 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
SCFD1-223ENST00000557076 TRAV12-1A0A0B4J245 112 aa2.13□□□□□ -2.07
SCFD1-223ENST00000557076 J3KT08 172 aa2.13□□□□□ -2.07
SCFD1-223ENST00000557076 Q5VV11 94 aa2.13□□□□□ -2.07
SCFD1-223ENST00000557076 SPANXDQ9BXN6 97 aa2.13□□□□□ -2.07
SCFD1-223ENST00000557076 LEPROTO15243 131 aa2.12□□□□□ -2.07
SCFD1-223ENST00000557076 NMUP48645 174 aa2.12□□□□□ -2.07
SCFD1-223ENST00000557076 PP632Q6XCG6 107 aa2.12□□□□□ -2.07
SCFD1-223ENST00000557076 CLEC2BQ92478 149 aa2.12□□□□□ -2.07
SCFD1-223ENST00000557076 TMEM218A2RU14 115 aa2.11□□□□□ -2.07
SCFD1-223ENST00000557076 F8WEM9 126 aa2.11□□□□□ -2.07
SCFD1-223ENST00000557076 J3QQQ9 107 aa2.11□□□□□ -2.07
SCFD1-223ENST00000557076 LINC00313P59037 77 aa2.11□□□□□ -2.07
SCFD1-223ENST00000557076 TSPEAR-AS2P59090 65 aa2.11□□□□□ -2.07
SCFD1-223ENST00000557076 KRTAP19-8Q3LI54 63 aa2.11□□□□□ -2.07
SCFD1-223ENST00000557076 TRAV13-2A0A0B4J235 113 aa2.1□□□□□ -2.07
SCFD1-223ENST00000557076 C9JAW5 83 aa2.1□□□□□ -2.07
SCFD1-223ENST00000557076 J3QR89 54 aa2.1□□□□□ -2.07
SCFD1-223ENST00000557076 SPRR2DP22532 72 aa2.1□□□□□ -2.07
SCFD1-223ENST00000557076 FABP9Q0Z7S8 132 aa2.1□□□□□ -2.07
SCFD1-223ENST00000557076 PMCHL1Q16048 86 aa2.1□□□□□ -2.07
SCFD1-223ENST00000557076 SCGB1D4Q6XE38 83 aa2.1□□□□□ -2.07
SCFD1-223ENST00000557076 IFI27L1Q96BM0 104 aa2.1□□□□□ -2.07
SCFD1-223ENST00000557076 PSMB2P49721 201 aa2.09□□□□□ -2.07
SCFD1-223ENST00000557076 SPINK7P58062 85 aa2.09□□□□□ -2.07
SCFD1-223ENST00000557076 NPC2P61916 151 aa2.09□□□□□ -2.07
SCFD1-223ENST00000557076 COL5A1-AS1Q5SY13 56 aa2.09□□□□□ -2.07
SCFD1-223ENST00000557076 LINC00308Q8TCZ7 52 aa2.09□□□□□ -2.07
SCFD1-223ENST00000557076 SEC11CQ9BY50 192 aa2.09□□□□□ -2.07
SCFD1-223ENST00000557076 NHP2Q9NX24 153 aaKnown RBP2.09□□□□□ -2.07
SCFD1-223ENST00000557076 A0A1W2PNM2 257 aa2.08□□□□□ -2.08
SCFD1-223ENST00000557076 ANKRD29Q8N6D5 301 aa2.08□□□□□ -2.08
SCFD1-223ENST00000557076 C18orf32Q8TCD1 76 aa2.08□□□□□ -2.08
SCFD1-223ENST00000557076 ANAPC13Q9BS18 74 aa2.08□□□□□ -2.08
SCFD1-223ENST00000557076 SNHG12Q9BXW3 62 aa2.08□□□□□ -2.08
SCFD1-223ENST00000557076 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
SCFD1-223ENST00000557076 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
SCFD1-223ENST00000557076 COLCA2A8K830 154 aa2.07□□□□□ -2.08
SCFD1-223ENST00000557076 C8orf87E5RJ46 101 aa2.07□□□□□ -2.08
SCFD1-223ENST00000557076 NDUFS5O43920 106 aa2.07□□□□□ -2.08
SCFD1-223ENST00000557076 S100A2P29034 98 aa2.07□□□□□ -2.08
SCFD1-223ENST00000557076 GTF2H5Q6ZYL4 71 aa2.07□□□□□ -2.08
SCFD1-223ENST00000557076 TIMM17BO60830 172 aa2.06□□□□□ -2.08
SCFD1-223ENST00000557076 PLNP26678 52 aa2.06□□□□□ -2.08
SCFD1-223ENST00000557076 HERVK_113P61574 105 aa2.06□□□□□ -2.08
SCFD1-223ENST00000557076 LYRM7Q5U5X0 104 aa2.06□□□□□ -2.08
SCFD1-223ENST00000557076 DSTQ03001 7570 aaKnown RBP2.06□□□□□ -2.08
SCFD1-223ENST00000557076 PSPHP1O15172 72 aa2.05□□□□□ -2.08
SCFD1-223ENST00000557076 DPM2O94777 84 aa2.05□□□□□ -2.08
SCFD1-223ENST00000557076 HSD52Q0P140 79 aa2.05□□□□□ -2.08
SCFD1-223ENST00000557076 H1FX-AS1Q4G0G2 97 aa2.05□□□□□ -2.08
SCFD1-223ENST00000557076 TEN1Q86WV5 123 aa2.05□□□□□ -2.08
SCFD1-223ENST00000557076 CHCHD1Q96BP2 118 aaKnown RBP2.05□□□□□ -2.08
SCFD1-223ENST00000557076 IMUPQ9GZP8 106 aa2.05□□□□□ -2.08
SCFD1-223ENST00000557076 PYY3Q5JQD4 70 aa2.04□□□□□ -2.08
SCFD1-223ENST00000557076 CLLU1Q5K131 121 aa2.04□□□□□ -2.08
SCFD1-223ENST00000557076 LINC00575Q6W349 94 aa2.04□□□□□ -2.08
SCFD1-223ENST00000557076 KRTAP8-1Q8IUC2 63 aa2.04□□□□□ -2.08
SCFD1-223ENST00000557076 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
SCFD1-223ENST00000557076 PPDPFLQ8WWR9 84 aa2.04□□□□□ -2.08
SCFD1-223ENST00000557076 hADV29S1A0JD25 119 aa2.03□□□□□ -2.08
SCFD1-223ENST00000557076 C3orf79P0CE67 100 aa2.03□□□□□ -2.08
SCFD1-223ENST00000557076 COA6Q5JTJ3 125 aaKnown RBP2.03□□□□□ -2.08
SCFD1-223ENST00000557076 Q6ZQY7 126 aa2.03□□□□□ -2.08
SCFD1-223ENST00000557076 WFDC13Q8IUB5 93 aa2.03□□□□□ -2.08
SCFD1-223ENST00000557076 TRAPPC1Q9Y5R8 145 aa2.03□□□□□ -2.08
SCFD1-223ENST00000557076 A0A087WSZ3 146 aa2.02□□□□□ -2.09
SCFD1-223ENST00000557076 H3BUT2 72 aa2.02□□□□□ -2.09
SCFD1-223ENST00000557076 MP68P56378 58 aa2.02□□□□□ -2.09
SCFD1-223ENST00000557076 CAMK2N1Q7Z7J9 78 aa2.02□□□□□ -2.09
SCFD1-223ENST00000557076 PRR15Q8IV56 129 aa2.02□□□□□ -2.09
SCFD1-223ENST00000557076 SMIM11BQ8TCY0 68 aa2.02□□□□□ -2.09
SCFD1-223ENST00000557076 SMIM26A0A096LP01 95 aa2.01□□□□□ -2.09
SCFD1-223ENST00000557076 IGHV6-1A0A0B4J1U7 121 aa2.01□□□□□ -2.09
SCFD1-223ENST00000557076 IGKCP01834 107 aa2.01□□□□□ -2.09
SCFD1-223ENST00000557076 IGKV4-1P06312 121 aa2.01□□□□□ -2.09
SCFD1-223ENST00000557076 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-223ENST00000557076 COPS9Q8WXC6 57 aa2.01□□□□□ -2.09
SCFD1-223ENST00000557076 FAM236AA0A1B0GUQ0 79 aa2□□□□□ -2.09
SCFD1-223ENST00000557076 FAM236BA0A1B0GV22 79 aa2□□□□□ -2.09
SCFD1-223ENST00000557076 SCGB1C2P0DMR2 95 aa2□□□□□ -2.09
SCFD1-223ENST00000557076 IFITM1P13164 125 aa2□□□□□ -2.09
SCFD1-223ENST00000557076 YPEL4Q96NS1 127 aa2□□□□□ -2.09
SCFD1-223ENST00000557076 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
SCFD1-223ENST00000557076 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
SCFD1-223ENST00000557076 LEPROTL1O95214 131 aa1.99□□□□□ -2.09
SCFD1-223ENST00000557076 TRGC2P03986 189 aa1.99□□□□□ -2.09
SCFD1-223ENST00000557076 KTN1-AS1Q86SY8 53 aa1.99□□□□□ -2.09
SCFD1-223ENST00000557076 SVBPQ8N300 66 aa1.99□□□□□ -2.09
SCFD1-223ENST00000557076 NAA38Q9BRA0 125 aaKnown RBP1.99□□□□□ -2.09
SCFD1-223ENST00000557076 A8MUN3 132 aa1.98□□□□□ -2.09
SCFD1-223ENST00000557076 CCDC179H3BU77 68 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms