RNA–Protein interactions for RNA: ENST00000556938.1

SLC38A6-220, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-220ENST00000556938 DEFB106AQ8N104 65 aa0.39□□□□□ -2.35
SLC38A6-220ENST00000556938 IGSF10Q6WRI0 2623 aa0.39□□□□□ -2.35
SLC38A6-220ENST00000556938 DNAH11Q96DT5 4516 aa0.39□□□□□ -2.35
SLC38A6-220ENST00000556938 SPENQ96T58 3664 aaKnown RBP0.38□□□□□ -2.35
SLC38A6-220ENST00000556938 AKAP9Q99996 3911 aa0.38□□□□□ -2.35
SLC38A6-220ENST00000556938 DCHS2Q6V1P9 2916 aa0.38□□□□□ -2.35
SLC38A6-220ENST00000556938 HIVEP3Q5T1R4 2406 aa0.38□□□□□ -2.35
SLC38A6-220ENST00000556938 ATP7AQ04656 1500 aa0.38□□□□□ -2.35
SLC38A6-220ENST00000556938 FLNCQ14315 2725 aa0.37□□□□□ -2.35
SLC38A6-220ENST00000556938 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
SLC38A6-220ENST00000556938 ACANP16112 2415 aa0.37□□□□□ -2.35
SLC38A6-220ENST00000556938 FAT4Q6V0I7 4981 aa0.37□□□□□ -2.35
SLC38A6-220ENST00000556938 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
SLC38A6-220ENST00000556938 APC2O95996 2303 aa0.37□□□□□ -2.35
SLC38A6-220ENST00000556938 HRNRQ86YZ3 2850 aaPredicted RBP0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 CACNA1AO00555 2505 aa0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 CUBNO60494 3623 aa0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 NSD1Q96L73 2696 aaPredicted RBP0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 H0YGG7 62 aa0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 WFDC10BQ8IUB3 73 aa0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 KAAG1Q9UBP8 84 aa0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 FLGP20930 4061 aaPredicted RBP0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 FLNBO75369 2602 aaKnown RBP0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 COL7A1Q02388 2944 aa0.36□□□□□ -2.35
SLC38A6-220ENST00000556938 PKHD1L1Q86WI1 4243 aa0.35□□□□□ -2.35
SLC38A6-220ENST00000556938 DNAH9Q9NYC9 4486 aa0.35□□□□□ -2.35
SLC38A6-220ENST00000556938 KMT2DO14686 5537 aa0.35□□□□□ -2.35
SLC38A6-220ENST00000556938 SAMD9LQ8IVG5 1584 aa0.35□□□□□ -2.35
SLC38A6-220ENST00000556938 TACC2O95359 2948 aa0.34□□□□□ -2.35
SLC38A6-220ENST00000556938 DMXL1Q9Y485 3027 aa0.34□□□□□ -2.35
SLC38A6-220ENST00000556938 IGLV5-48A0A075B6I7 105 aa0.34□□□□□ -2.36
SLC38A6-220ENST00000556938 NDUFA1O15239 70 aa0.34□□□□□ -2.36
SLC38A6-220ENST00000556938 HSPG2P98160 4391 aa0.34□□□□□ -2.36
SLC38A6-220ENST00000556938 TRPM2O94759 1503 aa0.33□□□□□ -2.36
SLC38A6-220ENST00000556938 PKHD1P08F94 4074 aa0.33□□□□□ -2.36
SLC38A6-220ENST00000556938 NBPF19A0A087WUL8 3843 aa0.33□□□□□ -2.36
SLC38A6-220ENST00000556938 SPRR2DP22532 72 aa0.33□□□□□ -2.36
SLC38A6-220ENST00000556938 ANK3Q12955 4377 aaKnown RBP0.33□□□□□ -2.36
SLC38A6-220ENST00000556938 GCN1Q92616 2671 aaKnown RBP0.33□□□□□ -2.36
SLC38A6-220ENST00000556938 HMCN2Q8NDA2 5059 aa0.33□□□□□ -2.36
SLC38A6-220ENST00000556938 SPTBN5Q9NRC6 3674 aaKnown RBP0.32□□□□□ -2.36
SLC38A6-220ENST00000556938 NOP10Q9NPE3 64 aaKnown RBP0.32□□□□□ -2.36
SLC38A6-220ENST00000556938 SETD2Q9BYW2 2564 aaPredicted RBP0.32□□□□□ -2.36
SLC38A6-220ENST00000556938 APOBP04114 4563 aaKnown RBP0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 DNAH2Q9P225 4427 aa0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 KALRNO60229 2985 aa0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 DNAH7Q8WXX0 4024 aa0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 MMP24-AS1A0A0U1RRL7 71 aa0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 DEFB131AP59861 70 aa0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 DYNC2H1Q8NCM8 4307 aaKnown RBP0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 MAST4O15021 2626 aa0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 FLNAP21333 2647 aaKnown RBP0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 DNAH6Q9C0G6 4158 aa0.31□□□□□ -2.36
SLC38A6-220ENST00000556938 TENM2Q9NT68 2774 aa0.3□□□□□ -2.36
SLC38A6-220ENST00000556938 NBEAL2Q6ZNJ1 2754 aa0.3□□□□□ -2.36
SLC38A6-220ENST00000556938 CLTCL1P53675 1640 aa0.3□□□□□ -2.36
SLC38A6-220ENST00000556938 LRRK2Q5S007 2527 aa0.3□□□□□ -2.36
SLC38A6-220ENST00000556938 LRP1BQ9NZR2 4599 aa0.3□□□□□ -2.36
SLC38A6-220ENST00000556938 MAP1AP78559 2803 aaPredicted RBP0.29□□□□□ -2.36
SLC38A6-220ENST00000556938 FAT3Q8TDW7 4589 aa0.29□□□□□ -2.36
SLC38A6-220ENST00000556938 NBEAQ8NFP9 2946 aa0.29□□□□□ -2.36
SLC38A6-220ENST00000556938 C9orf92A6NGG3 77 aa0.29□□□□□ -2.36
SLC38A6-220ENST00000556938 RIF1Q5UIP0 2472 aaKnown RBP0.29□□□□□ -2.36
SLC38A6-220ENST00000556938 STAB1Q9NY15 2570 aa0.29□□□□□ -2.36
SLC38A6-220ENST00000556938 ANKRD11Q6UB99 2663 aaPredicted RBP0.29□□□□□ -2.36
SLC38A6-220ENST00000556938 ACACAQ13085 2346 aa0.29□□□□□ -2.36
SLC38A6-220ENST00000556938 UTP20O75691 2785 aaKnown RBP0.28□□□□□ -2.36
SLC38A6-220ENST00000556938 DMBT1Q9UGM3 2413 aaPredicted RBP0.28□□□□□ -2.36
SLC38A6-220ENST00000556938 MTORP42345 2549 aa0.28□□□□□ -2.36
SLC38A6-220ENST00000556938 COL6A3P12111 3177 aa0.28□□□□□ -2.36
SLC38A6-220ENST00000556938 SPRR2BP35325 72 aa0.28□□□□□ -2.36
SLC38A6-220ENST00000556938 COL12A1Q99715 3063 aa0.28□□□□□ -2.36
SLC38A6-220ENST00000556938 SPTBN4Q9H254 2564 aa0.28□□□□□ -2.37
SLC38A6-220ENST00000556938 EPG5Q9HCE0 2579 aa0.28□□□□□ -2.37
SLC38A6-220ENST00000556938 VPS13DQ5THJ4 4388 aa0.27□□□□□ -2.37
SLC38A6-220ENST00000556938 SONP18583 2426 aaKnown RBP0.27□□□□□ -2.37
SLC38A6-220ENST00000556938 SPG11Q96JI7 2443 aa0.27□□□□□ -2.37
SLC38A6-220ENST00000556938 SVEP1Q4LDE5 3571 aa0.27□□□□□ -2.37
SLC38A6-220ENST00000556938 CHD7Q9P2D1 2997 aa0.27□□□□□ -2.37
SLC38A6-220ENST00000556938 DNAH1Q9P2D7 4330 aa0.27□□□□□ -2.37
SLC38A6-220ENST00000556938 HTTP42858 3142 aa0.27□□□□□ -2.37
SLC38A6-220ENST00000556938 A8MTW9 85 aa0.26□□□□□ -2.37
SLC38A6-220ENST00000556938 SNRPGP62308 76 aaKnown RBP0.26□□□□□ -2.37
SLC38A6-220ENST00000556938 LRP2P98164 4655 aa0.26□□□□□ -2.37
SLC38A6-220ENST00000556938 ANKHD1Q8IWZ3 2542 aaKnown RBP0.26□□□□□ -2.37
SLC38A6-220ENST00000556938 COL6A5A8TX70 2615 aa0.26□□□□□ -2.37
SLC38A6-220ENST00000556938 FRYQ5TBA9 3013 aa0.26□□□□□ -2.37
SLC38A6-220ENST00000556938 LAMA5O15230 3695 aa0.26□□□□□ -2.37
SLC38A6-220ENST00000556938 FAM186AA6NE01 2351 aa0.25□□□□□ -2.37
SLC38A6-220ENST00000556938 DNAH8Q96JB1 4490 aa0.25□□□□□ -2.37
SLC38A6-220ENST00000556938 H3BNG1 76 aa0.25□□□□□ -2.37
SLC38A6-220ENST00000556938 M0QY20 66 aa0.25□□□□□ -2.37
SLC38A6-220ENST00000556938 RANBP2P49792 3224 aaKnown RBP0.25□□□□□ -2.37
SLC38A6-220ENST00000556938 TGP01266 2768 aa0.25□□□□□ -2.37
SLC38A6-220ENST00000556938 HIVEP1P15822 2718 aa0.25□□□□□ -2.37
SLC38A6-220ENST00000556938 FASNP49327 2511 aaKnown RBP0.24□□□□□ -2.37
SLC38A6-220ENST00000556938 ZANQ9Y493 2812 aa0.24□□□□□ -2.37
SLC38A6-220ENST00000556938 M0QZ58 72 aa0.23□□□□□ -2.37
SLC38A6-220ENST00000556938 TEP1Q99973 2627 aaKnown RBP0.23□□□□□ -2.37
SLC38A6-220ENST00000556938 ZFHX4Q86UP3 3567 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms