RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 C8orf87E5RJ46 101 aa8.88□□□□□ -0.99
VIPAS39-209ENST00000556909 KRTAP19-6Q3LI70 58 aa8.88□□□□□ -0.99
VIPAS39-209ENST00000556909 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
VIPAS39-209ENST00000556909 H3BQ85 93 aa8.87□□□□□ -0.99
VIPAS39-209ENST00000556909 LINC00846Q9NV44 126 aa8.87□□□□□ -0.99
VIPAS39-209ENST00000556909 ZCCHC13Q8WW36 166 aaKnown RBP8.86□□□□□ -0.99
VIPAS39-209ENST00000556909 TMEM256-PLSCR3K7ERE1 68 aa8.85□□□□□ -0.99
VIPAS39-209ENST00000556909 SPINK7P58062 85 aa8.84□□□□□ -0.99
VIPAS39-209ENST00000556909 VAMP8Q9BV40 100 aa8.84□□□□□ -0.99
VIPAS39-209ENST00000556909 PSMB2P49721 201 aa8.8□□□□□ -1
VIPAS39-209ENST00000556909 UBE2V1Q13404 147 aa8.8□□□□□ -1
VIPAS39-209ENST00000556909 VPS25Q9BRG1 176 aa8.8□□□□□ -1
VIPAS39-209ENST00000556909 K7ERJ3 54 aa8.79□□□□□ -1
VIPAS39-209ENST00000556909 A8MWP4 228 aa8.78□□□□□ -1
VIPAS39-209ENST00000556909 COX6CP09669 75 aa8.76□□□□□ -1.01
VIPAS39-209ENST00000556909 WFDC13Q8IUB5 93 aa8.75□□□□□ -1.01
VIPAS39-209ENST00000556909 J3KT08 172 aa8.74□□□□□ -1.01
VIPAS39-209ENST00000556909 Q8N9P0 234 aaPredicted RBP8.74□□□□□ -1.01
VIPAS39-209ENST00000556909 RBM3P98179 157 aaKnown RBP8.73□□□□□ -1.01
VIPAS39-209ENST00000556909 HSD52Q0P140 79 aa8.72□□□□□ -1.01
VIPAS39-209ENST00000556909 DSCR8Q96T75 97 aa8.72□□□□□ -1.01
VIPAS39-209ENST00000556909 NDUFB1O75438 58 aa8.67□□□□□ -1.02
VIPAS39-209ENST00000556909 C21orf62-AS1Q17RA5 79 aa8.67□□□□□ -1.02
VIPAS39-209ENST00000556909 Q6ZQT0 140 aa8.67□□□□□ -1.02
VIPAS39-209ENST00000556909 LOC105371267A0A1B0GV96 52 aa8.66□□□□□ -1.02
VIPAS39-209ENST00000556909 KRTAP6-3Q3LI67 103 aa8.66□□□□□ -1.02
VIPAS39-209ENST00000556909 LYRM7Q5U5X0 104 aa8.66□□□□□ -1.02
VIPAS39-209ENST00000556909 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
VIPAS39-209ENST00000556909 TMA7Q9Y2S6 64 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-209ENST00000556909 C9JAW5 83 aa8.65□□□□□ -1.02
VIPAS39-209ENST00000556909 SCGB1C2P0DMR2 95 aa8.61□□□□□ -1.03
VIPAS39-209ENST00000556909 IGKV3D-7A0A0C4DH55 119 aa8.6□□□□□ -1.03
VIPAS39-209ENST00000556909 BAALC-AS2P0C853 105 aa8.6□□□□□ -1.03
VIPAS39-209ENST00000556909 Q6ZVQ6 151 aa8.58□□□□□ -1.04
VIPAS39-209ENST00000556909 H1FX-AS1Q4G0G2 97 aa8.56□□□□□ -1.04
VIPAS39-209ENST00000556909 PYY3Q5JQD4 70 aa8.56□□□□□ -1.04
VIPAS39-209ENST00000556909 UQCR10Q9UDW1 63 aa8.52□□□□□ -1.05
VIPAS39-209ENST00000556909 LOC110117498A0A087WWA1 95 aa8.51□□□□□ -1.05
VIPAS39-209ENST00000556909 A0A1B0GW54 56 aa8.51□□□□□ -1.05
VIPAS39-209ENST00000556909 PRR15Q8IV56 129 aa8.51□□□□□ -1.05
VIPAS39-209ENST00000556909 MMP24-AS1A0A0U1RRL7 71 aa8.49□□□□□ -1.05
VIPAS39-209ENST00000556909 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
VIPAS39-209ENST00000556909 TMEM254Q8TBM7 123 aa8.49□□□□□ -1.05
VIPAS39-209ENST00000556909 MRPL34Q9BQ48 92 aaKnown RBP8.49□□□□□ -1.05
VIPAS39-209ENST00000556909 NEBP20929 6669 aa8.45□□□□□ -1.06
VIPAS39-209ENST00000556909 PDE6GP18545 87 aa8.44□□□□□ -1.06
VIPAS39-209ENST00000556909 ATXN8Q156A1 80 aa8.43□□□□□ -1.06
VIPAS39-209ENST00000556909 C14orf132Q9NPU4 83 aa8.43□□□□□ -1.06
VIPAS39-209ENST00000556909 NDUFS5O43920 106 aa8.42□□□□□ -1.06
VIPAS39-209ENST00000556909 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
VIPAS39-209ENST00000556909 hDV103S1A0JD37 113 aa8.41□□□□□ -1.06
VIPAS39-209ENST00000556909 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
VIPAS39-209ENST00000556909 NREPQ16612 68 aa8.41□□□□□ -1.06
VIPAS39-209ENST00000556909 NAA38Q9BRA0 125 aaKnown RBP8.39□□□□□ -1.07
VIPAS39-209ENST00000556909 K7EQZ3 153 aa8.38□□□□□ -1.07
VIPAS39-209ENST00000556909 C7orf65Q6ZTY9 151 aa8.38□□□□□ -1.07
VIPAS39-209ENST00000556909 MUC12Q9UKN1 5478 aa8.37□□□□□ -1.07
VIPAS39-209ENST00000556909 Q5W150 140 aa8.36□□□□□ -1.07
VIPAS39-209ENST00000556909 A6NN06 94 aa8.34□□□□□ -1.07
VIPAS39-209ENST00000556909 MT1BP07438 61 aa8.31□□□□□ -1.08
VIPAS39-209ENST00000556909 SMIM6P0DI80 62 aa8.31□□□□□ -1.08
VIPAS39-209ENST00000556909 C4orf26Q17RF5 130 aa8.3□□□□□ -1.08
VIPAS39-209ENST00000556909 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
VIPAS39-209ENST00000556909 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
VIPAS39-209ENST00000556909 M0R143 59 aa8.28□□□□□ -1.08
VIPAS39-209ENST00000556909 C5orf47Q569G3 176 aa8.28□□□□□ -1.08
VIPAS39-209ENST00000556909 Q5VV11 94 aa8.26□□□□□ -1.09
VIPAS39-209ENST00000556909 PCP4L1A6NKN8 68 aa8.24□□□□□ -1.09
VIPAS39-209ENST00000556909 BPY2O14599 106 aa8.24□□□□□ -1.09
VIPAS39-209ENST00000556909 HCG22E2RYF7 251 aa8.23□□□□□ -1.09
VIPAS39-209ENST00000556909 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
VIPAS39-209ENST00000556909 SPRR2GQ9BYE4 73 aa8.22□□□□□ -1.09
VIPAS39-209ENST00000556909 CASC2Q6XLA1 102 aa8.21□□□□□ -1.1
VIPAS39-209ENST00000556909 KRTAP20-1Q3LI63 56 aa8.2□□□□□ -1.1
VIPAS39-209ENST00000556909 Q8N9L7 120 aa8.2□□□□□ -1.1
VIPAS39-209ENST00000556909 KRTAP10-5P60370 271 aa8.19□□□□□ -1.1
VIPAS39-209ENST00000556909 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
VIPAS39-209ENST00000556909 S4R3F8 94 aa8.18□□□□□ -1.1
VIPAS39-209ENST00000556909 CXCL6P80162 114 aa8.16□□□□□ -1.1
VIPAS39-209ENST00000556909 H3BT86 120 aa8.14□□□□□ -1.11
VIPAS39-209ENST00000556909 KRTAP5-9P26371 169 aa8.14□□□□□ -1.11
VIPAS39-209ENST00000556909 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
VIPAS39-209ENST00000556909 LCA10Q71F78 164 aa8.13□□□□□ -1.11
VIPAS39-209ENST00000556909 KMT2DO14686 5537 aa8.1□□□□□ -1.11
VIPAS39-209ENST00000556909 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.11
VIPAS39-209ENST00000556909 KLKP1Q107X0 134 aa8.08□□□□□ -1.12
VIPAS39-209ENST00000556909 MDN1Q9NU22 5596 aa8.08□□□□□ -1.12
VIPAS39-209ENST00000556909 TSTD3H0UI37 97 aa8.06□□□□□ -1.12
VIPAS39-209ENST00000556909 BATFQ16520 125 aa8.05□□□□□ -1.12
VIPAS39-209ENST00000556909 C9orf118A6NHY6 69 aa8.01□□□□□ -1.13
VIPAS39-209ENST00000556909 A0A1W2PPM0 123 aa7.99□□□□□ -1.13
VIPAS39-209ENST00000556909 TAX1BP3O14907 124 aa7.96□□□□□ -1.14
VIPAS39-209ENST00000556909 IMUPQ9GZP8 106 aa7.96□□□□□ -1.14
VIPAS39-209ENST00000556909 SMCPP49901 116 aaPredicted RBP7.93□□□□□ -1.14
VIPAS39-209ENST00000556909 UBL5Q9BZL1 73 aa7.93□□□□□ -1.14
VIPAS39-209ENST00000556909 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
VIPAS39-209ENST00000556909 TP53AIP1Q9HCN2 124 aa7.89□□□□□ -1.15
VIPAS39-209ENST00000556909 KRTAP2-3P0C7H8 128 aa7.88□□□□□ -1.15
VIPAS39-209ENST00000556909 KRTAP2-4Q9BYR9 128 aa7.88□□□□□ -1.15
VIPAS39-209ENST00000556909 A0A087WVE0 104 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms