RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
HNRNPC-227ENST00000556897 ATOX1O00244 68 aa4.73□□□□□ -1.65
HNRNPC-227ENST00000556897 LGALS3P17931 250 aaKnown RBP4.73□□□□□ -1.65
HNRNPC-227ENST00000556897 ADAMTSL4-AS1Q5T5F5 129 aa4.73□□□□□ -1.65
HNRNPC-227ENST00000556897 Q5XG85 94 aa4.73□□□□□ -1.65
HNRNPC-227ENST00000556897 SCGB1D4Q6XE38 83 aa4.73□□□□□ -1.65
HNRNPC-227ENST00000556897 DEFB105AQ8NG35 78 aa4.73□□□□□ -1.65
HNRNPC-227ENST00000556897 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
HNRNPC-227ENST00000556897 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
HNRNPC-227ENST00000556897 TRACP01848 142 aa4.72□□□□□ -1.65
HNRNPC-227ENST00000556897 PRO0628Q9UI54 55 aa4.72□□□□□ -1.65
HNRNPC-227ENST00000556897 FAM236AA0A1B0GUQ0 79 aa4.71□□□□□ -1.66
HNRNPC-227ENST00000556897 FAM236BA0A1B0GV22 79 aa4.71□□□□□ -1.66
HNRNPC-227ENST00000556897 COX6CP09669 75 aa4.71□□□□□ -1.66
HNRNPC-227ENST00000556897 HIST1H4AP62805 103 aaKnown RBP4.71□□□□□ -1.66
HNRNPC-227ENST00000556897 SMIM29Q86T20 159 aa4.71□□□□□ -1.66
HNRNPC-227ENST00000556897 A0A0J9YXY3 114 aa4.7□□□□□ -1.66
HNRNPC-227ENST00000556897 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
HNRNPC-227ENST00000556897 TEX49A0A1B0GTD5 131 aa4.69□□□□□ -1.66
HNRNPC-227ENST00000556897 COX7BP24311 80 aa4.69□□□□□ -1.66
HNRNPC-227ENST00000556897 ELOF1P60002 83 aaKnown RBP4.69□□□□□ -1.66
HNRNPC-227ENST00000556897 C6orf99Q4VX62 202 aa4.68□□□□□ -1.66
HNRNPC-227ENST00000556897 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
HNRNPC-227ENST00000556897 LINC00308Q8TCZ7 52 aa4.68□□□□□ -1.66
HNRNPC-227ENST00000556897 SERP2Q8N6R1 65 aa4.67□□□□□ -1.66
HNRNPC-227ENST00000556897 LST1O00453 97 aa4.66□□□□□ -1.66
HNRNPC-227ENST00000556897 ATP11AUNQ6ZP68 121 aa4.66□□□□□ -1.66
HNRNPC-227ENST00000556897 COPS9Q8WXC6 57 aa4.66□□□□□ -1.66
HNRNPC-227ENST00000556897 LITAFQ99732 161 aa4.66□□□□□ -1.66
HNRNPC-227ENST00000556897 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
HNRNPC-227ENST00000556897 IGLV5-48A0A075B6I7 105 aa4.64□□□□□ -1.67
HNRNPC-227ENST00000556897 OBSCN-AS1Q96MR7 158 aa4.64□□□□□ -1.67
HNRNPC-227ENST00000556897 TIMM17BO60830 172 aa4.63□□□□□ -1.67
HNRNPC-227ENST00000556897 Q6JHZ5 121 aa4.63□□□□□ -1.67
HNRNPC-227ENST00000556897 Q75L30 129 aa4.63□□□□□ -1.67
HNRNPC-227ENST00000556897 TRBV7-6A0A0J9YX20 115 aa4.62□□□□□ -1.67
HNRNPC-227ENST00000556897 hADV29S1A0JD25 119 aa4.62□□□□□ -1.67
HNRNPC-227ENST00000556897 SEC61GP60059 68 aa4.62□□□□□ -1.67
HNRNPC-227ENST00000556897 SERP1Q9Y6X1 66 aa4.62□□□□□ -1.67
HNRNPC-227ENST00000556897 C4orf26Q17RF5 130 aa4.61□□□□□ -1.67
HNRNPC-227ENST00000556897 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
HNRNPC-227ENST00000556897 MUSTN1Q8IVN3 82 aa4.61□□□□□ -1.67
HNRNPC-227ENST00000556897 MPLKIPQ8TAP9 179 aa4.61□□□□□ -1.67
HNRNPC-227ENST00000556897 V9GYY9 64 aa4.61□□□□□ -1.67
HNRNPC-227ENST00000556897 MT2AP02795 61 aa4.6□□□□□ -1.67
HNRNPC-227ENST00000556897 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.67
HNRNPC-227ENST00000556897 ATP5EP2Q5VTU8 51 aa4.59□□□□□ -1.67
HNRNPC-227ENST00000556897 F8WEM9 126 aa4.58□□□□□ -1.68
HNRNPC-227ENST00000556897 ATP5EP56381 51 aaPredicted RBP4.58□□□□□ -1.68
HNRNPC-227ENST00000556897 MT1FP04733 61 aa4.57□□□□□ -1.68
HNRNPC-227ENST00000556897 Q96NJ1 140 aa4.57□□□□□ -1.68
HNRNPC-227ENST00000556897 FAM236DA0A1B0GTK5 79 aa4.56□□□□□ -1.68
HNRNPC-227ENST00000556897 FAM236CP0DP71 79 aa4.56□□□□□ -1.68
HNRNPC-227ENST00000556897 CLEC2BQ92478 149 aa4.56□□□□□ -1.68
HNRNPC-227ENST00000556897 DSCR8Q96T75 97 aa4.56□□□□□ -1.68
HNRNPC-227ENST00000556897 IGFL1Q6UW32 110 aa4.55□□□□□ -1.68
HNRNPC-227ENST00000556897 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
HNRNPC-227ENST00000556897 NDUFC1O43677 76 aa4.54□□□□□ -1.68
HNRNPC-227ENST00000556897 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
HNRNPC-227ENST00000556897 C20orf166-AS1Q96NR2 134 aa4.54□□□□□ -1.68
HNRNPC-227ENST00000556897 BAALC-AS2P0C853 105 aa4.53□□□□□ -1.68
HNRNPC-227ENST00000556897 SMIM11BQ8TCY0 68 aa4.53□□□□□ -1.68
HNRNPC-227ENST00000556897 A8MUU9 505 aa4.52□□□□□ -1.69
HNRNPC-227ENST00000556897 DNAL4O96015 105 aa4.52□□□□□ -1.69
HNRNPC-227ENST00000556897 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
HNRNPC-227ENST00000556897 TRAV7A0A075B6U4 112 aa4.51□□□□□ -1.69
HNRNPC-227ENST00000556897 TRAV13-2A0A0B4J235 113 aa4.51□□□□□ -1.69
HNRNPC-227ENST00000556897 KLKP1Q107X0 134 aa4.51□□□□□ -1.69
HNRNPC-227ENST00000556897 Q6ZQY7 126 aa4.51□□□□□ -1.69
HNRNPC-227ENST00000556897 LINC00575Q6W349 94 aa4.5□□□□□ -1.69
HNRNPC-227ENST00000556897 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
HNRNPC-227ENST00000556897 H0YGX0 51 aa4.49□□□□□ -1.69
HNRNPC-227ENST00000556897 H7BZZ5 65 aa4.49□□□□□ -1.69
HNRNPC-227ENST00000556897 NEBP20929 6669 aa4.49□□□□□ -1.69
HNRNPC-227ENST00000556897 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
HNRNPC-227ENST00000556897 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
HNRNPC-227ENST00000556897 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
HNRNPC-227ENST00000556897 LINC00846Q9NV44 126 aa4.47□□□□□ -1.69
HNRNPC-227ENST00000556897 JMJD7-PLA2G4BH0Y9G9 81 aa4.46□□□□□ -1.7
HNRNPC-227ENST00000556897 CCKP06307 115 aa4.46□□□□□ -1.7
HNRNPC-227ENST00000556897 IGKV3D-7A0A0C4DH55 119 aa4.45□□□□□ -1.7
HNRNPC-227ENST00000556897 DSCR10P59022 87 aa4.45□□□□□ -1.7
HNRNPC-227ENST00000556897 PRR15Q8IV56 129 aa4.45□□□□□ -1.7
HNRNPC-227ENST00000556897 RBM12B-AS1Q9P1G2 102 aa4.45□□□□□ -1.7
HNRNPC-227ENST00000556897 HRES1P13985 223 aa4.44□□□□□ -1.7
HNRNPC-227ENST00000556897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.44□□□□□ -1.7
HNRNPC-227ENST00000556897 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
HNRNPC-227ENST00000556897 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
HNRNPC-227ENST00000556897 A0A087WSZ3 146 aa4.42□□□□□ -1.7
HNRNPC-227ENST00000556897 H3BQ85 93 aa4.42□□□□□ -1.7
HNRNPC-227ENST00000556897 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
HNRNPC-227ENST00000556897 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
HNRNPC-227ENST00000556897 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
HNRNPC-227ENST00000556897 UBL5Q9BZL1 73 aa4.42□□□□□ -1.7
HNRNPC-227ENST00000556897 A0A087WVE0 104 aa4.41□□□□□ -1.7
HNRNPC-227ENST00000556897 RBM3P98179 157 aaKnown RBP4.41□□□□□ -1.7
HNRNPC-227ENST00000556897 FAM218AQ96MZ4 157 aa4.41□□□□□ -1.7
HNRNPC-227ENST00000556897 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
HNRNPC-227ENST00000556897 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.71
HNRNPC-227ENST00000556897 PDE6GP18545 87 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms