RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 ANKRD11Q6UB99 2663 aaPredicted RBP1.03□□□□□ -2.24
FCF1-208ENST00000556814 SETXQ7Z333 2677 aaKnown RBP1.03□□□□□ -2.24
FCF1-208ENST00000556814 PTPRZ1P23471 2315 aaPredicted RBP1.03□□□□□ -2.25
FCF1-208ENST00000556814 CEP250Q9BV73 2442 aa1.03□□□□□ -2.25
FCF1-208ENST00000556814 FASNP49327 2511 aaKnown RBP1.03□□□□□ -2.25
FCF1-208ENST00000556814 MAST4O15021 2626 aa1.02□□□□□ -2.25
FCF1-208ENST00000556814 BOD1L1Q8NFC6 3051 aa1.02□□□□□ -2.25
FCF1-208ENST00000556814 H3BNG1 76 aa1.02□□□□□ -2.25
FCF1-208ENST00000556814 C10orf99Q6UWK7 81 aa1.02□□□□□ -2.25
FCF1-208ENST00000556814 MED13LQ71F56 2210 aa1.02□□□□□ -2.25
FCF1-208ENST00000556814 CFAP46Q8IYW2 2715 aa1.02□□□□□ -2.25
FCF1-208ENST00000556814 GCN1Q92616 2671 aaKnown RBP1.02□□□□□ -2.25
FCF1-208ENST00000556814 CELSR3Q9NYQ7 3312 aa1.02□□□□□ -2.25
FCF1-208ENST00000556814 ABCA1O95477 2261 aa1.01□□□□□ -2.25
FCF1-208ENST00000556814 UBR5O95071 2799 aaPredicted RBP1.01□□□□□ -2.25
FCF1-208ENST00000556814 TENM4Q6N022 2769 aa1.01□□□□□ -2.25
FCF1-208ENST00000556814 IGSF10Q6WRI0 2623 aa1.01□□□□□ -2.25
FCF1-208ENST00000556814 MAP1BP46821 2468 aaKnown RBP1.01□□□□□ -2.25
FCF1-208ENST00000556814 EP300Q09472 2414 aaPredicted RBP1.01□□□□□ -2.25
FCF1-208ENST00000556814 PTPRQQ9UMZ3 2332 aa1.01□□□□□ -2.25
FCF1-208ENST00000556814 RELNP78509 3460 aa1.01□□□□□ -2.25
FCF1-208ENST00000556814 URB1O60287 2271 aaKnown RBP1.01□□□□□ -2.25
FCF1-208ENST00000556814 NCOR2Q9Y618 2525 aa1□□□□□ -2.25
FCF1-208ENST00000556814 CRYBG3Q68DQ2 2970 aa1□□□□□ -2.25
FCF1-208ENST00000556814 FLNBO75369 2602 aaKnown RBP1□□□□□ -2.25
FCF1-208ENST00000556814 BSNQ9UPA5 3926 aa1□□□□□ -2.25
FCF1-208ENST00000556814 KNL1Q8NG31 2342 aa1□□□□□ -2.25
FCF1-208ENST00000556814 WNK2Q9Y3S1 2297 aa1□□□□□ -2.25
FCF1-208ENST00000556814 AKAP13Q12802 2813 aa1□□□□□ -2.25
FCF1-208ENST00000556814 CEP295Q9C0D2 2601 aa1□□□□□ -2.25
FCF1-208ENST00000556814 CELSR1Q9NYQ6 3014 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 NAV2Q8IVL1 2488 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 CELSR2Q9HCU4 2923 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 K7EIL1 84 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 SPART-AS1P0CW21 52 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 DEFB130BP0DP73 79 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 DEFB130AP0DP74 79 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 LINC01556Q5JQF7 62 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 UBE2DNLQ8IWF7 75 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 FBN2P35556 2912 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 TEX15Q9BXT5 2789 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 CNOT1A5YKK6 2376 aaKnown RBP0.99□□□□□ -2.25
FCF1-208ENST00000556814 CACNA1EQ15878 2313 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 ASXL3Q9C0F0 2248 aa0.99□□□□□ -2.25
FCF1-208ENST00000556814 SPTA1P02549 2419 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 UNC79Q9P2D8 2635 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 LRBAP50851 2863 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 ZFYVE26Q68DK2 2539 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 ADGRG4Q8IZF6 3080 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 FLNCQ14315 2725 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 ITPR2Q14571 2701 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 WNK1Q9H4A3 2382 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 OTOGQ6ZRI0 2925 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 MYO18BQ8IUG5 2567 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 ABCA4P78363 2273 aa0.98□□□□□ -2.25
FCF1-208ENST00000556814 PDZD2O15018 2839 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 ZNF462Q96JM2 2506 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 ALMS1Q8TCU4 4167 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 PTPN13Q12923 2485 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 DCHS2Q6V1P9 2916 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 ACACAQ13085 2346 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 PRLHP81277 87 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 DEFB136Q30KP8 78 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 DEFB124Q8NES8 71 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 DOPEY2Q9Y3R5 2298 aa0.97□□□□□ -2.25
FCF1-208ENST00000556814 TACC2O95359 2948 aa0.96□□□□□ -2.26
FCF1-208ENST00000556814 USP9XQ93008 2570 aaPredicted RBP0.96□□□□□ -2.26
FCF1-208ENST00000556814 PIEZO2Q9H5I5 2752 aa0.96□□□□□ -2.26
FCF1-208ENST00000556814 A0A096LPF7 62 aa0.96□□□□□ -2.26
FCF1-208ENST00000556814 CSMD1Q96PZ7 3565 aa0.96□□□□□ -2.26
FCF1-208ENST00000556814 ANKRD17O75179 2603 aaKnown RBP0.96□□□□□ -2.26
FCF1-208ENST00000556814 APCP25054 2843 aa0.96□□□□□ -2.26
FCF1-208ENST00000556814 NIPBLQ6KC79 2804 aaeCLIP0.96□□□□□ -2.26
FCF1-208ENST00000556814 SPTBN2O15020 2390 aa0.96□□□□□ -2.26
FCF1-208ENST00000556814 IGF2RP11717 2491 aa0.95□□□□□ -2.26
FCF1-208ENST00000556814 NF1P21359 2839 aa0.95□□□□□ -2.26
FCF1-208ENST00000556814 SPINK1P00995 79 aa0.95□□□□□ -2.26
FCF1-208ENST00000556814 PRRC2CQ9Y520 2896 aaKnown RBP0.95□□□□□ -2.26
FCF1-208ENST00000556814 AHCTF1Q8WYP5 2266 aa0.95□□□□□ -2.26
FCF1-208ENST00000556814 USP9YO00507 2555 aaPredicted RBP0.95□□□□□ -2.26
FCF1-208ENST00000556814 CENPEQ02224 2701 aa0.95□□□□□ -2.26
FCF1-208ENST00000556814 SPTBN1Q01082 2364 aaKnown RBP0.94□□□□□ -2.26
FCF1-208ENST00000556814 APC2O95996 2303 aa0.94□□□□□ -2.26
FCF1-208ENST00000556814 CSMD2Q7Z408 3487 aa0.94□□□□□ -2.26
FCF1-208ENST00000556814 ABCA12Q86UK0 2595 aa0.94□□□□□ -2.26
FCF1-208ENST00000556814 SPENQ96T58 3664 aaKnown RBP0.94□□□□□ -2.26
FCF1-208ENST00000556814 S4R3F8 94 aa0.94□□□□□ -2.26
FCF1-208ENST00000556814 LRRK2Q5S007 2527 aa0.94□□□□□ -2.26
FCF1-208ENST00000556814 AKAP9Q99996 3911 aa0.94□□□□□ -2.26
FCF1-208ENST00000556814 MYO9AB2RTY4 2548 aa0.93□□□□□ -2.26
FCF1-208ENST00000556814 TLN1Q9Y490 2541 aaKnown RBP0.93□□□□□ -2.26
FCF1-208ENST00000556814 TEP1Q99973 2627 aaKnown RBP0.93□□□□□ -2.26
FCF1-208ENST00000556814 SPTAN1Q13813 2472 aaKnown RBP0.93□□□□□ -2.26
FCF1-208ENST00000556814 M0QZ58 72 aa0.93□□□□□ -2.26
FCF1-208ENST00000556814 C10orf95Q9H7T3 257 aa0.93□□□□□ -2.26
FCF1-208ENST00000556814 APLNQ9ULZ1 77 aa0.93□□□□□ -2.26
FCF1-208ENST00000556814 DOPEY1Q5JWR5 2465 aa0.93□□□□□ -2.26
FCF1-208ENST00000556814 DNHD1Q96M86 4753 aa0.93□□□□□ -2.26
FCF1-208ENST00000556814 UTP20O75691 2785 aaKnown RBP0.92□□□□□ -2.26
FCF1-208ENST00000556814 HECTD1Q9ULT8 2610 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms