RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 PCOTHQ58A44 107 aa12.08□□□□□ -0.48
PABPN1-206ENST00000556809 J3KT08 172 aa12.07□□□□□ -0.48
PABPN1-206ENST00000556809 DSCR10P59022 87 aa12.06□□□□□ -0.48
PABPN1-206ENST00000556809 NREPQ16612 68 aa12.03□□□□□ -0.48
PABPN1-206ENST00000556809 IGHV6-1A0A0B4J1U7 121 aa12.01□□□□□ -0.49
PABPN1-206ENST00000556809 LINC00313P59037 77 aa12.01□□□□□ -0.49
PABPN1-206ENST00000556809 A0A1B0GVX0 72 aa12□□□□□ -0.49
PABPN1-206ENST00000556809 Q75L30 129 aa12□□□□□ -0.49
PABPN1-206ENST00000556809 ETDBQ3ZM63 59 aa11.97□□□□□ -0.49
PABPN1-206ENST00000556809 NOTCH2NLQ7Z3S9 236 aa11.97□□□□□ -0.49
PABPN1-206ENST00000556809 C20orf166-AS1Q96NR2 134 aa11.97□□□□□ -0.49
PABPN1-206ENST00000556809 C8orf87E5RJ46 101 aa11.95□□□□□ -0.5
PABPN1-206ENST00000556809 NDUFB1O75438 58 aa11.95□□□□□ -0.5
PABPN1-206ENST00000556809 A8MUU9 505 aa11.94□□□□□ -0.5
PABPN1-206ENST00000556809 KRTAP16-1A8MUX0 517 aa11.94□□□□□ -0.5
PABPN1-206ENST00000556809 A8MWP4 228 aa11.94□□□□□ -0.5
PABPN1-206ENST00000556809 KRTAP19-2Q3LHN2 52 aa11.93□□□□□ -0.5
PABPN1-206ENST00000556809 LCE2CQ5TA81 110 aa11.92□□□□□ -0.5
PABPN1-206ENST00000556809 ATP11AUNQ6ZP68 121 aa11.91□□□□□ -0.5
PABPN1-206ENST00000556809 Q6ZVQ6 151 aa11.9□□□□□ -0.5
PABPN1-206ENST00000556809 IGKV3D-7A0A0C4DH55 119 aa11.89□□□□□ -0.51
PABPN1-206ENST00000556809 A0A1B0GV90 55 aa11.89□□□□□ -0.51
PABPN1-206ENST00000556809 LINC00846Q9NV44 126 aa11.87□□□□□ -0.51
PABPN1-206ENST00000556809 BPY2O14599 106 aa11.86□□□□□ -0.51
PABPN1-206ENST00000556809 PRR15Q8IV56 129 aa11.85□□□□□ -0.51
PABPN1-206ENST00000556809 C8orf17Q9NRJ1 99 aa11.84□□□□□ -0.51
PABPN1-206ENST00000556809 UBL5Q9BZL1 73 aa11.83□□□□□ -0.52
PABPN1-206ENST00000556809 K7EQZ3 153 aa11.8□□□□□ -0.52
PABPN1-206ENST00000556809 MMP24-AS1A0A0U1RRL7 71 aa11.74□□□□□ -0.53
PABPN1-206ENST00000556809 MT1HP80294 61 aa11.72□□□□□ -0.53
PABPN1-206ENST00000556809 Q8N9P0 234 aaPredicted RBP11.72□□□□□ -0.53
PABPN1-206ENST00000556809 Q8N9L7 120 aa11.71□□□□□ -0.53
PABPN1-206ENST00000556809 KRTAP9-2Q9BYQ4 174 aa11.7□□□□□ -0.54
PABPN1-206ENST00000556809 TMEM254Q8TBM7 123 aa11.68□□□□□ -0.54
PABPN1-206ENST00000556809 hDV103S1A0JD37 113 aa11.67□□□□□ -0.54
PABPN1-206ENST00000556809 ACYP1P07311 99 aa11.67□□□□□ -0.54
PABPN1-206ENST00000556809 MRPL34Q9BQ48 92 aaKnown RBP11.67□□□□□ -0.54
PABPN1-206ENST00000556809 FAM240AA0A1B0GVK7 77 aa11.65□□□□□ -0.54
PABPN1-206ENST00000556809 ZCCHC13Q8WW36 166 aaKnown RBP11.64□□□□□ -0.55
PABPN1-206ENST00000556809 CXCL6P80162 114 aa11.62□□□□□ -0.55
PABPN1-206ENST00000556809 WFDC13Q8IUB5 93 aa11.6□□□□□ -0.55
PABPN1-206ENST00000556809 CASC2Q6XLA1 102 aa11.59□□□□□ -0.55
PABPN1-206ENST00000556809 FLGP20930 4061 aaPredicted RBP11.59□□□□□ -0.55
PABPN1-206ENST00000556809 COX6B2Q6YFQ2 88 aa11.57□□□□□ -0.56
PABPN1-206ENST00000556809 NDUFS5O43920 106 aa11.56□□□□□ -0.56
PABPN1-206ENST00000556809 HCG22E2RYF7 251 aa11.54□□□□□ -0.56
PABPN1-206ENST00000556809 ATP5EP2Q5VTU8 51 aa11.49□□□□□ -0.57
PABPN1-206ENST00000556809 LORP23490 312 aaPredicted RBP11.48□□□□□ -0.57
PABPN1-206ENST00000556809 KRTAP10-6P60371 365 aaPredicted RBP11.47□□□□□ -0.57
PABPN1-206ENST00000556809 LCE2DQ5TA82 110 aaPredicted RBP11.46□□□□□ -0.57
PABPN1-206ENST00000556809 SPINK7P58062 85 aa11.45□□□□□ -0.58
PABPN1-206ENST00000556809 J3QR89 54 aa11.44□□□□□ -0.58
PABPN1-206ENST00000556809 HRES1P13985 223 aa11.43□□□□□ -0.58
PABPN1-206ENST00000556809 M0R2T5 61 aa11.42□□□□□ -0.58
PABPN1-206ENST00000556809 LINC00643Q86TS7 51 aa11.42□□□□□ -0.58
PABPN1-206ENST00000556809 Q5W150 140 aa11.39□□□□□ -0.59
PABPN1-206ENST00000556809 MPLKIPQ8TAP9 179 aa11.38□□□□□ -0.59
PABPN1-206ENST00000556809 RBM12B-AS1Q9P1G2 102 aa11.36□□□□□ -0.59
PABPN1-206ENST00000556809 HIST1H4AP62805 103 aaKnown RBP11.35□□□□□ -0.59
PABPN1-206ENST00000556809 FAM236DA0A1B0GTK5 79 aa11.31□□□□□ -0.6
PABPN1-206ENST00000556809 FAM236CP0DP71 79 aa11.31□□□□□ -0.6
PABPN1-206ENST00000556809 TP53AIP1Q9HCN2 124 aa11.3□□□□□ -0.6
PABPN1-206ENST00000556809 IGKV2D-30A0A075B6S6 120 aa11.27□□□□□ -0.61
PABPN1-206ENST00000556809 IGKV2-30P06310 120 aa11.27□□□□□ -0.61
PABPN1-206ENST00000556809 C7orf65Q6ZTY9 151 aa11.26□□□□□ -0.61
PABPN1-206ENST00000556809 A0A087WVE0 104 aa11.24□□□□□ -0.61
PABPN1-206ENST00000556809 KRTAP9-6A0A140TA67 174 aa11.24□□□□□ -0.61
PABPN1-206ENST00000556809 K7ERU9 68 aa11.2□□□□□ -0.62
PABPN1-206ENST00000556809 KRTAP9-8Q9BYQ0 159 aa11.14□□□□□ -0.63
PABPN1-206ENST00000556809 TRAV22A0A0B4J277 110 aa11.1□□□□□ -0.63
PABPN1-206ENST00000556809 UQCRQO14949 82 aa11.09□□□□□ -0.63
PABPN1-206ENST00000556809 CRCT1Q9UGL9 99 aa11.07□□□□□ -0.64
PABPN1-206ENST00000556809 FSIP2Q5CZC0 6907 aa11.04□□□□□ -0.64
PABPN1-206ENST00000556809 C4orf26Q17RF5 130 aa11.03□□□□□ -0.64
PABPN1-206ENST00000556809 LOC101927531A0A1B0GV80 90 aa11□□□□□ -0.65
PABPN1-206ENST00000556809 H0Y9P7 68 aa11□□□□□ -0.65
PABPN1-206ENST00000556809 MT-ATP8P03928 68 aa11□□□□□ -0.65
PABPN1-206ENST00000556809 IMUPQ9GZP8 106 aa11□□□□□ -0.65
PABPN1-206ENST00000556809 H1FX-AS1Q4G0G2 97 aa10.99□□□□□ -0.65
PABPN1-206ENST00000556809 OCR1Q9BZK8 76 aa10.99□□□□□ -0.65
PABPN1-206ENST00000556809 CYP4F30PQ9H0H9 118 aa10.99□□□□□ -0.65
PABPN1-206ENST00000556809 ATOX1O00244 68 aa10.98□□□□□ -0.65
PABPN1-206ENST00000556809 MT2AP02795 61 aa10.97□□□□□ -0.65
PABPN1-206ENST00000556809 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
PABPN1-206ENST00000556809 MT1FP04733 61 aa10.89□□□□□ -0.67
PABPN1-206ENST00000556809 C1orf64Q8NEQ6 169 aa10.88□□□□□ -0.67
PABPN1-206ENST00000556809 MP68P56378 58 aa10.87□□□□□ -0.67
PABPN1-206ENST00000556809 KRTAP3-1Q9BYR8 98 aa10.87□□□□□ -0.67
PABPN1-206ENST00000556809 LINC00208Q96KT6 92 aa10.86□□□□□ -0.67
PABPN1-206ENST00000556809 C5orf47Q569G3 176 aa10.85□□□□□ -0.67
PABPN1-206ENST00000556809 FAM236AA0A1B0GUQ0 79 aa10.81□□□□□ -0.68
PABPN1-206ENST00000556809 FAM236BA0A1B0GV22 79 aa10.81□□□□□ -0.68
PABPN1-206ENST00000556809 KRTAP9-3Q9BYQ3 159 aa10.79□□□□□ -0.68
PABPN1-206ENST00000556809 KRTAP10-10P60014 251 aa10.78□□□□□ -0.68
PABPN1-206ENST00000556809 H3BPC8 53 aa10.77□□□□□ -0.69
PABPN1-206ENST00000556809 USH2AO75445 5202 aa10.74□□□□□ -0.69
PABPN1-206ENST00000556809 KLKP1Q107X0 134 aa10.73□□□□□ -0.69
PABPN1-206ENST00000556809 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
PABPN1-206ENST00000556809 S4R3F8 94 aa10.72□□□□□ -0.69
PABPN1-206ENST00000556809 LCE2BO14633 110 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms