RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 SPINK1P00995 79 aa6.22□□□□□ -1.41
LINC01550-206ENST00000556462 C4orf48Q5BLP8 95 aa6.22□□□□□ -1.41
LINC01550-206ENST00000556462 LINC00304Q8N9R0 145 aa6.22□□□□□ -1.41
LINC01550-206ENST00000556462 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
LINC01550-206ENST00000556462 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
LINC01550-206ENST00000556462 ASB16-AS1Q495Z4 193 aa6.22□□□□□ -1.41
LINC01550-206ENST00000556462 IGKV4-1P06312 121 aa6.21□□□□□ -1.42
LINC01550-206ENST00000556462 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
LINC01550-206ENST00000556462 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
LINC01550-206ENST00000556462 K7EQZ3 153 aa6.2□□□□□ -1.42
LINC01550-206ENST00000556462 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
LINC01550-206ENST00000556462 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
LINC01550-206ENST00000556462 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
LINC01550-206ENST00000556462 A8MWP4 228 aa6.18□□□□□ -1.42
LINC01550-206ENST00000556462 HERC2O95714 4834 aa6.17□□□□□ -1.42
LINC01550-206ENST00000556462 PRR15Q8IV56 129 aa6.16□□□□□ -1.42
LINC01550-206ENST00000556462 OXTP01178 125 aa6.16□□□□□ -1.42
LINC01550-206ENST00000556462 MT1HL1P0DM35 61 aa6.15□□□□□ -1.42
LINC01550-206ENST00000556462 NDUFB1O75438 58 aa6.13□□□□□ -1.43
LINC01550-206ENST00000556462 DMBT1Q9UGM3 2413 aaPredicted RBP6.13□□□□□ -1.43
LINC01550-206ENST00000556462 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
LINC01550-206ENST00000556462 A0A1B0GVX0 72 aa6.11□□□□□ -1.43
LINC01550-206ENST00000556462 IGHV6-1A0A0B4J1U7 121 aa6.1□□□□□ -1.43
LINC01550-206ENST00000556462 TRAV7A0A075B6U4 112 aa6.1□□□□□ -1.43
LINC01550-206ENST00000556462 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
LINC01550-206ENST00000556462 C4orf26Q17RF5 130 aa6.1□□□□□ -1.43
LINC01550-206ENST00000556462 NOTCH2NLQ7Z3S9 236 aa6.1□□□□□ -1.43
LINC01550-206ENST00000556462 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
LINC01550-206ENST00000556462 MMP24-AS1A0A0U1RRL7 71 aa6.09□□□□□ -1.43
LINC01550-206ENST00000556462 FAM236DA0A1B0GTK5 79 aa6.09□□□□□ -1.43
LINC01550-206ENST00000556462 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
LINC01550-206ENST00000556462 FAM236CP0DP71 79 aa6.09□□□□□ -1.43
LINC01550-206ENST00000556462 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
LINC01550-206ENST00000556462 KLKP1Q107X0 134 aa6.08□□□□□ -1.44
LINC01550-206ENST00000556462 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
LINC01550-206ENST00000556462 H7BZZ5 65 aa6.06□□□□□ -1.44
LINC01550-206ENST00000556462 C20orf197Q8N268 126 aa6.06□□□□□ -1.44
LINC01550-206ENST00000556462 RETNLBQ9BQ08 111 aa6.06□□□□□ -1.44
LINC01550-206ENST00000556462 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
LINC01550-206ENST00000556462 hDV103S1A0JD37 113 aa6.05□□□□□ -1.44
LINC01550-206ENST00000556462 LINC00313P59037 77 aa6.03□□□□□ -1.44
LINC01550-206ENST00000556462 C8orf87E5RJ46 101 aa6.03□□□□□ -1.44
LINC01550-206ENST00000556462 NDUFC1O43677 76 aa6.03□□□□□ -1.44
LINC01550-206ENST00000556462 ATP5EP56381 51 aaPredicted RBP6.03□□□□□ -1.44
LINC01550-206ENST00000556462 OCR1Q9BZK8 76 aa6.02□□□□□ -1.45
LINC01550-206ENST00000556462 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
LINC01550-206ENST00000556462 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
LINC01550-206ENST00000556462 TMEM254Q8TBM7 123 aa6□□□□□ -1.45
LINC01550-206ENST00000556462 MRPL34Q9BQ48 92 aaKnown RBP6□□□□□ -1.45
LINC01550-206ENST00000556462 KRTAP16-1A8MUX0 517 aa6□□□□□ -1.45
LINC01550-206ENST00000556462 FP248Q71RG6 208 aaPredicted RBP5.97□□□□□ -1.45
LINC01550-206ENST00000556462 Q8N9P0 234 aaPredicted RBP5.96□□□□□ -1.46
LINC01550-206ENST00000556462 C9orf92A6NGG3 77 aa5.95□□□□□ -1.46
LINC01550-206ENST00000556462 J3QL48 77 aa5.94□□□□□ -1.46
LINC01550-206ENST00000556462 SNURFQ9Y675 71 aa5.94□□□□□ -1.46
LINC01550-206ENST00000556462 PCLOQ9Y6V0 5065 aa5.94□□□□□ -1.46
LINC01550-206ENST00000556462 NDUFS5O43920 106 aa5.94□□□□□ -1.46
LINC01550-206ENST00000556462 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
LINC01550-206ENST00000556462 TP53AIP1Q9HCN2 124 aa5.93□□□□□ -1.46
LINC01550-206ENST00000556462 PRR4Q16378 134 aa5.9□□□□□ -1.47
LINC01550-206ENST00000556462 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.47
LINC01550-206ENST00000556462 Q5W150 140 aa5.89□□□□□ -1.47
LINC01550-206ENST00000556462 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
LINC01550-206ENST00000556462 A0A0U1RQV1 116 aa5.88□□□□□ -1.47
LINC01550-206ENST00000556462 A8MUU9 505 aa5.88□□□□□ -1.47
LINC01550-206ENST00000556462 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
LINC01550-206ENST00000556462 H0Y9P7 68 aa5.87□□□□□ -1.47
LINC01550-206ENST00000556462 MP68P56378 58 aa5.84□□□□□ -1.47
LINC01550-206ENST00000556462 TPRXLQ17RH7 258 aa5.84□□□□□ -1.47
LINC01550-206ENST00000556462 LPAP08519 4548 aa5.84□□□□□ -1.47
LINC01550-206ENST00000556462 XP32Q5T750 250 aa5.84□□□□□ -1.47
LINC01550-206ENST00000556462 Q75L30 129 aa5.84□□□□□ -1.47
LINC01550-206ENST00000556462 ZCCHC13Q8WW36 166 aaKnown RBP5.84□□□□□ -1.47
LINC01550-206ENST00000556462 LINC00208Q96KT6 92 aa5.84□□□□□ -1.47
LINC01550-206ENST00000556462 H3BPC8 53 aa5.83□□□□□ -1.48
LINC01550-206ENST00000556462 HERC1Q15751 4861 aa5.82□□□□□ -1.48
LINC01550-206ENST00000556462 C1orf64Q8NEQ6 169 aa5.81□□□□□ -1.48
LINC01550-206ENST00000556462 BRK1Q8WUW1 75 aa5.81□□□□□ -1.48
LINC01550-206ENST00000556462 LRP2P98164 4655 aa5.8□□□□□ -1.48
LINC01550-206ENST00000556462 RPL37P61927 97 aaKnown RBP5.79□□□□□ -1.48
LINC01550-206ENST00000556462 Q1T7F1 81 aa5.77□□□□□ -1.49
LINC01550-206ENST00000556462 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
LINC01550-206ENST00000556462 LOC101927531A0A1B0GV80 90 aa5.76□□□□□ -1.49
LINC01550-206ENST00000556462 V9GYY9 64 aa5.76□□□□□ -1.49
LINC01550-206ENST00000556462 IGKV2-30P06310 120 aa5.76□□□□□ -1.49
LINC01550-206ENST00000556462 CYP4F30PQ9H0H9 118 aa5.76□□□□□ -1.49
LINC01550-206ENST00000556462 ATP11AUNQ6ZP68 121 aa5.74□□□□□ -1.49
LINC01550-206ENST00000556462 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
LINC01550-206ENST00000556462 PCOTHQ58A44 107 aa5.71□□□□□ -1.49
LINC01550-206ENST00000556462 HMCN2Q8NDA2 5059 aa5.71□□□□□ -1.49
LINC01550-206ENST00000556462 SEC61GP60059 68 aa5.69□□□□□ -1.5
LINC01550-206ENST00000556462 C7orf65Q6ZTY9 151 aa5.69□□□□□ -1.5
LINC01550-206ENST00000556462 SPINK7P58062 85 aa5.68□□□□□ -1.5
LINC01550-206ENST00000556462 LCE2BO14633 110 aa5.67□□□□□ -1.5
LINC01550-206ENST00000556462 HRES1P13985 223 aa5.66□□□□□ -1.5
LINC01550-206ENST00000556462 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
LINC01550-206ENST00000556462 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
LINC01550-206ENST00000556462 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
LINC01550-206ENST00000556462 SEC61BP60468 96 aaKnown RBP5.62□□□□□ -1.51
LINC01550-206ENST00000556462 PSPHP1O15172 72 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms