RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 A0A1B0GVX0 72 aa11.25□□□□□ -0.61
ACTN1-220ENST00000556433 C8orf87E5RJ46 101 aa11.25□□□□□ -0.61
ACTN1-220ENST00000556433 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
ACTN1-220ENST00000556433 SSPOA2VEC9 5147 aa11.23□□□□□ -0.61
ACTN1-220ENST00000556433 DSCR8Q96T75 97 aa11.23□□□□□ -0.61
ACTN1-220ENST00000556433 MT1FP04733 61 aa11.17□□□□□ -0.62
ACTN1-220ENST00000556433 BAALC-AS2P0C853 105 aa11.17□□□□□ -0.62
ACTN1-220ENST00000556433 C9JAW5 83 aa11.16□□□□□ -0.62
ACTN1-220ENST00000556433 J3KT08 172 aa11.16□□□□□ -0.62
ACTN1-220ENST00000556433 ZCCHC13Q8WW36 166 aaKnown RBP11.15□□□□□ -0.62
ACTN1-220ENST00000556433 KRTAP10-10P60014 251 aa11.14□□□□□ -0.63
ACTN1-220ENST00000556433 C21orf62-AS1Q17RA5 79 aa11.14□□□□□ -0.63
ACTN1-220ENST00000556433 MTURNQ8N3F0 131 aa11.13□□□□□ -0.63
ACTN1-220ENST00000556433 Q6ZQT0 140 aa11.12□□□□□ -0.63
ACTN1-220ENST00000556433 SPINK7P58062 85 aa11.11□□□□□ -0.63
ACTN1-220ENST00000556433 LCE2BO14633 110 aa11.09□□□□□ -0.63
ACTN1-220ENST00000556433 NDUFB1O75438 58 aa11.09□□□□□ -0.63
ACTN1-220ENST00000556433 KRTAP9-3Q9BYQ3 159 aa11.09□□□□□ -0.63
ACTN1-220ENST00000556433 TMA7Q9Y2S6 64 aaKnown RBP11.09□□□□□ -0.63
ACTN1-220ENST00000556433 Q8N9P0 234 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-220ENST00000556433 FCGBPQ9Y6R7 5405 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-220ENST00000556433 JMJD7-PLA2G4BH0Y9G9 81 aa11.01□□□□□ -0.65
ACTN1-220ENST00000556433 LYRM7Q5U5X0 104 aa11.01□□□□□ -0.65
ACTN1-220ENST00000556433 KRTAP19-1Q8IUB9 90 aa11.01□□□□□ -0.65
ACTN1-220ENST00000556433 C8orf17Q9NRJ1 99 aa11.01□□□□□ -0.65
ACTN1-220ENST00000556433 A8MWP4 228 aa11□□□□□ -0.65
ACTN1-220ENST00000556433 ATXN8Q156A1 80 aa11□□□□□ -0.65
ACTN1-220ENST00000556433 A0A1B0GW54 56 aa10.98□□□□□ -0.65
ACTN1-220ENST00000556433 NAA38Q9BRA0 125 aaKnown RBP10.98□□□□□ -0.65
ACTN1-220ENST00000556433 LOC110117498A0A087WWA1 95 aa10.97□□□□□ -0.65
ACTN1-220ENST00000556433 IGKV3D-7A0A0C4DH55 119 aa10.96□□□□□ -0.65
ACTN1-220ENST00000556433 WFDC13Q8IUB5 93 aa10.95□□□□□ -0.66
ACTN1-220ENST00000556433 M0R143 59 aa10.94□□□□□ -0.66
ACTN1-220ENST00000556433 PDE6GP18545 87 aa10.94□□□□□ -0.66
ACTN1-220ENST00000556433 Q6ZVQ6 151 aa10.92□□□□□ -0.66
ACTN1-220ENST00000556433 C14orf132Q9NPU4 83 aa10.91□□□□□ -0.66
ACTN1-220ENST00000556433 PRR15Q8IV56 129 aa10.88□□□□□ -0.67
ACTN1-220ENST00000556433 NREPQ16612 68 aa10.87□□□□□ -0.67
ACTN1-220ENST00000556433 MRPL34Q9BQ48 92 aaKnown RBP10.82□□□□□ -0.68
ACTN1-220ENST00000556433 TMEM254Q8TBM7 123 aa10.81□□□□□ -0.68
ACTN1-220ENST00000556433 MMP24-AS1A0A0U1RRL7 71 aa10.8□□□□□ -0.68
ACTN1-220ENST00000556433 LINC00846Q9NV44 126 aa10.79□□□□□ -0.68
ACTN1-220ENST00000556433 hDV103S1A0JD37 113 aa10.75□□□□□ -0.69
ACTN1-220ENST00000556433 NDUFS5O43920 106 aa10.75□□□□□ -0.69
ACTN1-220ENST00000556433 MACF1Q9UPN3 7388 aaKnown RBP10.74□□□□□ -0.69
ACTN1-220ENST00000556433 K7EQZ3 153 aa10.73□□□□□ -0.69
ACTN1-220ENST00000556433 KRTAP19-6Q3LI70 58 aa10.73□□□□□ -0.69
ACTN1-220ENST00000556433 H1FX-AS1Q4G0G2 97 aa10.73□□□□□ -0.69
ACTN1-220ENST00000556433 SYNE2Q8WXH0 6885 aaKnown RBP10.72□□□□□ -0.69
ACTN1-220ENST00000556433 SMIM6P0DI80 62 aa10.71□□□□□ -0.69
ACTN1-220ENST00000556433 BATFQ16520 125 aa10.69□□□□□ -0.7
ACTN1-220ENST00000556433 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.7
ACTN1-220ENST00000556433 BPY2O14599 106 aa10.65□□□□□ -0.7
ACTN1-220ENST00000556433 IGKV2-30P06310 120 aa10.65□□□□□ -0.7
ACTN1-220ENST00000556433 H3BT86 120 aa10.64□□□□□ -0.71
ACTN1-220ENST00000556433 Q5W150 140 aa10.62□□□□□ -0.71
ACTN1-220ENST00000556433 LOC105371267A0A1B0GV96 52 aa10.61□□□□□ -0.71
ACTN1-220ENST00000556433 C9orf118A6NHY6 69 aa10.6□□□□□ -0.71
ACTN1-220ENST00000556433 TSTD3H0UI37 97 aa10.6□□□□□ -0.71
ACTN1-220ENST00000556433 C7orf65Q6ZTY9 151 aa10.6□□□□□ -0.71
ACTN1-220ENST00000556433 A0A1W2PPM0 123 aa10.55□□□□□ -0.72
ACTN1-220ENST00000556433 TAX1BP3O14907 124 aa10.54□□□□□ -0.72
ACTN1-220ENST00000556433 CASC2Q6XLA1 102 aa10.54□□□□□ -0.72
ACTN1-220ENST00000556433 Q8N9L7 120 aa10.54□□□□□ -0.72
ACTN1-220ENST00000556433 HCG22E2RYF7 251 aa10.52□□□□□ -0.73
ACTN1-220ENST00000556433 C4orf26Q17RF5 130 aa10.49□□□□□ -0.73
ACTN1-220ENST00000556433 CXCL6P80162 114 aa10.45□□□□□ -0.74
ACTN1-220ENST00000556433 SPCS1Q9Y6A9 102 aa10.4□□□□□ -0.74
ACTN1-220ENST00000556433 C5orf47Q569G3 176 aa10.38□□□□□ -0.75
ACTN1-220ENST00000556433 SMCPP49901 116 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-220ENST00000556433 KRTAP6-3Q3LI67 103 aa10.37□□□□□ -0.75
ACTN1-220ENST00000556433 UBL5Q9BZL1 73 aa10.34□□□□□ -0.75
ACTN1-220ENST00000556433 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
ACTN1-220ENST00000556433 FAM236AA0A1B0GUQ0 79 aa10.32□□□□□ -0.76
ACTN1-220ENST00000556433 FAM236BA0A1B0GV22 79 aa10.32□□□□□ -0.76
ACTN1-220ENST00000556433 S4R3F8 94 aa10.29□□□□□ -0.76
ACTN1-220ENST00000556433 CSAG1Q6PB30 78 aa10.27□□□□□ -0.77
ACTN1-220ENST00000556433 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.77
ACTN1-220ENST00000556433 PRO0461Q9UI25 63 aa10.24□□□□□ -0.77
ACTN1-220ENST00000556433 LCA10Q71F78 164 aa10.21□□□□□ -0.77
ACTN1-220ENST00000556433 A6NN06 94 aa10.19□□□□□ -0.78
ACTN1-220ENST00000556433 MT1BP07438 61 aa10.18□□□□□ -0.78
ACTN1-220ENST00000556433 Q5VV11 94 aa10.18□□□□□ -0.78
ACTN1-220ENST00000556433 TP53AIP1Q9HCN2 124 aa10.18□□□□□ -0.78
ACTN1-220ENST00000556433 COL5A1-AS1Q5SY13 56 aa10.17□□□□□ -0.78
ACTN1-220ENST00000556433 K7EP34 96 aa10.16□□□□□ -0.78
ACTN1-220ENST00000556433 SPRR2GQ9BYE4 73 aa10.15□□□□□ -0.78
ACTN1-220ENST00000556433 KRTAP19-8Q3LI54 63 aa10.14□□□□□ -0.79
ACTN1-220ENST00000556433 NEBP20929 6669 aa10.11□□□□□ -0.79
ACTN1-220ENST00000556433 KLKP1Q107X0 134 aa10.07□□□□□ -0.8
ACTN1-220ENST00000556433 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
ACTN1-220ENST00000556433 CYP4F30PQ9H0H9 118 aa10.03□□□□□ -0.8
ACTN1-220ENST00000556433 PCP4L1A6NKN8 68 aa10□□□□□ -0.81
ACTN1-220ENST00000556433 KRTAP10-5P60370 271 aa10□□□□□ -0.81
ACTN1-220ENST00000556433 GTF2H5Q6ZYL4 71 aa10□□□□□ -0.81
ACTN1-220ENST00000556433 F8W1H4 67 aa9.97□□□□□ -0.81
ACTN1-220ENST00000556433 ETDBQ3ZM63 59 aa9.97□□□□□ -0.81
ACTN1-220ENST00000556433 A0A087WVE0 104 aa9.95□□□□□ -0.82
ACTN1-220ENST00000556433 MUC12Q9UKN1 5478 aa9.94□□□□□ -0.82
ACTN1-220ENST00000556433 TRAV22A0A0B4J277 110 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms