RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
ARHGEF40-207ENST00000556399 LINC00483Q53H64 154 aa8.99□□□□□ -0.97
ARHGEF40-207ENST00000556399 PRAC1Q96KF2 57 aa8.98□□□□□ -0.97
ARHGEF40-207ENST00000556399 SVEP1Q4LDE5 3571 aa8.96□□□□□ -0.98
ARHGEF40-207ENST00000556399 CELSR1Q9NYQ6 3014 aa8.94□□□□□ -0.98
ARHGEF40-207ENST00000556399 A0A087X002 238 aa8.91□□□□□ -0.98
ARHGEF40-207ENST00000556399 NOTCH2NLQ7Z3S9 236 aa8.91□□□□□ -0.98
ARHGEF40-207ENST00000556399 DMAC1Q96GE9 116 aa8.9□□□□□ -0.99
ARHGEF40-207ENST00000556399 A8MU10 97 aa8.89□□□□□ -0.99
ARHGEF40-207ENST00000556399 LUZP6Q538Z0 58 aa8.84□□□□□ -0.99
ARHGEF40-207ENST00000556399 STAB2Q8WWQ8 2551 aa8.83□□□□□ -1
ARHGEF40-207ENST00000556399 A0A1B0GU33 70 aa8.83□□□□□ -1
ARHGEF40-207ENST00000556399 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
ARHGEF40-207ENST00000556399 A6NN06 94 aa8.8□□□□□ -1
ARHGEF40-207ENST00000556399 KMT2BQ9UMN6 2715 aaPredicted RBP8.8□□□□□ -1
ARHGEF40-207ENST00000556399 SPENQ96T58 3664 aaKnown RBP8.79□□□□□ -1
ARHGEF40-207ENST00000556399 CSAG1Q6PB30 78 aa8.77□□□□□ -1
ARHGEF40-207ENST00000556399 A0A0D9SG42 100 aa8.77□□□□□ -1.01
ARHGEF40-207ENST00000556399 Q6ZRN7 208 aaPredicted RBP8.77□□□□□ -1.01
ARHGEF40-207ENST00000556399 KRTAP10-2P60368 255 aa8.72□□□□□ -1.01
ARHGEF40-207ENST00000556399 Q6ZSA8 131 aa8.71□□□□□ -1.01
ARHGEF40-207ENST00000556399 A0A0A0MQY5 61 aa8.69□□□□□ -1.02
ARHGEF40-207ENST00000556399 SPATA8Q6RVD6 105 aa8.68□□□□□ -1.02
ARHGEF40-207ENST00000556399 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
ARHGEF40-207ENST00000556399 BSNQ9UPA5 3926 aa8.67□□□□□ -1.02
ARHGEF40-207ENST00000556399 ASB16-AS1Q495Z4 193 aa8.66□□□□□ -1.02
ARHGEF40-207ENST00000556399 CUBNO60494 3623 aa8.64□□□□□ -1.03
ARHGEF40-207ENST00000556399 TENM3Q9P273 2699 aa8.63□□□□□ -1.03
ARHGEF40-207ENST00000556399 FLG2Q5D862 2391 aaPredicted RBP8.61□□□□□ -1.03
ARHGEF40-207ENST00000556399 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
ARHGEF40-207ENST00000556399 M0R2T5 61 aa8.56□□□□□ -1.04
ARHGEF40-207ENST00000556399 KRTAP13-2Q52LG2 175 aa8.55□□□□□ -1.04
ARHGEF40-207ENST00000556399 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
ARHGEF40-207ENST00000556399 TENM1Q9UKZ4 2725 aa8.54□□□□□ -1.04
ARHGEF40-207ENST00000556399 VWFP04275 2813 aa8.53□□□□□ -1.04
ARHGEF40-207ENST00000556399 DMBT1Q9UGM3 2413 aaPredicted RBP8.52□□□□□ -1.05
ARHGEF40-207ENST00000556399 SEC61BP60468 96 aaKnown RBP8.47□□□□□ -1.05
ARHGEF40-207ENST00000556399 PDZD2O15018 2839 aa8.47□□□□□ -1.05
ARHGEF40-207ENST00000556399 KRTAP16-1A8MUX0 517 aa8.45□□□□□ -1.06
ARHGEF40-207ENST00000556399 S4R3F8 94 aa8.45□□□□□ -1.06
ARHGEF40-207ENST00000556399 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
ARHGEF40-207ENST00000556399 RPL37P61927 97 aaKnown RBP8.44□□□□□ -1.06
ARHGEF40-207ENST00000556399 ROMO1P60602 79 aa8.42□□□□□ -1.06
ARHGEF40-207ENST00000556399 Q5VSD8 79 aa8.42□□□□□ -1.06
ARHGEF40-207ENST00000556399 CSMD2Q7Z408 3487 aa8.41□□□□□ -1.06
ARHGEF40-207ENST00000556399 TENM4Q6N022 2769 aa8.4□□□□□ -1.06
ARHGEF40-207ENST00000556399 NBPF19A0A087WUL8 3843 aa8.38□□□□□ -1.07
ARHGEF40-207ENST00000556399 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
ARHGEF40-207ENST00000556399 KRTAP25-1Q3LHN0 102 aa8.34□□□□□ -1.07
ARHGEF40-207ENST00000556399 PKD1L1Q8TDX9 2849 aa8.3□□□□□ -1.08
ARHGEF40-207ENST00000556399 ANK3Q12955 4377 aaKnown RBP8.28□□□□□ -1.08
ARHGEF40-207ENST00000556399 FBN1P35555 2871 aaKnown RBP8.28□□□□□ -1.08
ARHGEF40-207ENST00000556399 OTOGQ6ZRI0 2925 aa8.25□□□□□ -1.09
ARHGEF40-207ENST00000556399 VPS13CQ709C8 3753 aa8.24□□□□□ -1.09
ARHGEF40-207ENST00000556399 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
ARHGEF40-207ENST00000556399 R4GN34 69 aa8.23□□□□□ -1.09
ARHGEF40-207ENST00000556399 KRTAP13-3Q3SY46 172 aa8.22□□□□□ -1.09
ARHGEF40-207ENST00000556399 TGP01266 2768 aa8.2□□□□□ -1.1
ARHGEF40-207ENST00000556399 ZFHX3Q15911 3703 aa8.19□□□□□ -1.1
ARHGEF40-207ENST00000556399 A8MUU9 505 aa8.19□□□□□ -1.1
ARHGEF40-207ENST00000556399 C20orf166-AS1Q96NR2 134 aa8.17□□□□□ -1.1
ARHGEF40-207ENST00000556399 KRTAP21-3Q3LHN1 58 aa8.15□□□□□ -1.1
ARHGEF40-207ENST00000556399 TRRAPQ9Y4A5 3859 aa8.14□□□□□ -1.11
ARHGEF40-207ENST00000556399 H0YAA0 97 aa8.13□□□□□ -1.11
ARHGEF40-207ENST00000556399 NDUFAF8A1L188 74 aa8.1□□□□□ -1.11
ARHGEF40-207ENST00000556399 M0QZ58 72 aa8.1□□□□□ -1.11
ARHGEF40-207ENST00000556399 SRRM2Q9UQ35 2752 aaKnown RBP8.05□□□□□ -1.12
ARHGEF40-207ENST00000556399 TENM2Q9NT68 2774 aa8.03□□□□□ -1.12
ARHGEF40-207ENST00000556399 PLAC4Q8WY50 150 aa8□□□□□ -1.13
ARHGEF40-207ENST00000556399 AKAP9Q99996 3911 aa7.91□□□□□ -1.14
ARHGEF40-207ENST00000556399 ZNF469Q96JG9 3925 aaPredicted RBP7.91□□□□□ -1.14
ARHGEF40-207ENST00000556399 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
ARHGEF40-207ENST00000556399 FBN3Q75N90 2809 aa7.85□□□□□ -1.15
ARHGEF40-207ENST00000556399 XP32Q5T750 250 aa7.82□□□□□ -1.16
ARHGEF40-207ENST00000556399 MEGF8Q7Z7M0 2845 aa7.75□□□□□ -1.17
ARHGEF40-207ENST00000556399 P0C880 135 aa7.74□□□□□ -1.17
ARHGEF40-207ENST00000556399 HUWE1Q7Z6Z7 4374 aaKnown RBP7.72□□□□□ -1.17
ARHGEF40-207ENST00000556399 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.17
ARHGEF40-207ENST00000556399 CSMD3Q7Z407 3707 aa7.62□□□□□ -1.19
ARHGEF40-207ENST00000556399 COL7A1Q02388 2944 aa7.59□□□□□ -1.19
ARHGEF40-207ENST00000556399 A0A1B0GVY2 172 aa7.54□□□□□ -1.2
ARHGEF40-207ENST00000556399 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
ARHGEF40-207ENST00000556399 KRTAP10-8P60410 259 aa7.53□□□□□ -1.2
ARHGEF40-207ENST00000556399 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
ARHGEF40-207ENST00000556399 TNP1P09430 55 aa7.5□□□□□ -1.21
ARHGEF40-207ENST00000556399 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.22
ARHGEF40-207ENST00000556399 KRTAP10-6P60371 365 aaPredicted RBP7.45□□□□□ -1.22
ARHGEF40-207ENST00000556399 PP632Q6XCG6 107 aa7.45□□□□□ -1.22
ARHGEF40-207ENST00000556399 KRTAP12-1P59990 96 aa7.42□□□□□ -1.22
ARHGEF40-207ENST00000556399 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
ARHGEF40-207ENST00000556399 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
ARHGEF40-207ENST00000556399 PLECQ15149 4684 aaKnown RBP7.32□□□□□ -1.24
ARHGEF40-207ENST00000556399 DNAH1Q9P2D7 4330 aa7.3□□□□□ -1.24
ARHGEF40-207ENST00000556399 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.24
ARHGEF40-207ENST00000556399 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.25
ARHGEF40-207ENST00000556399 KRTAP10-10P60014 251 aa7.21□□□□□ -1.26
ARHGEF40-207ENST00000556399 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
ARHGEF40-207ENST00000556399 KRTAP10-4P60372 401 aaPredicted RBP7.17□□□□□ -1.26
ARHGEF40-207ENST00000556399 DNAH11Q96DT5 4516 aa7.15□□□□□ -1.26
ARHGEF40-207ENST00000556399 DNAH17Q9UFH2 4485 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms