RNA–Protein interactions for RNA: ENST00000556395.1

AL390334.1-201, humanhuman

BASIC

Gene AL390334.1, Length 450 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-201ENST00000556395 C5orf42Q9H799 3197 aa2.21□□□□□ -2.06
AL390334.1-201ENST00000556395 ABCA2Q9BZC7 2435 aa2.21□□□□□ -2.06
AL390334.1-201ENST00000556395 USP34Q70CQ2 3546 aa2.21□□□□□ -2.06
AL390334.1-201ENST00000556395 FRYQ5TBA9 3013 aa2.2□□□□□ -2.06
AL390334.1-201ENST00000556395 CELSR1Q9NYQ6 3014 aa2.2□□□□□ -2.06
AL390334.1-201ENST00000556395 DEFB135Q30KP9 77 aa2.2□□□□□ -2.06
AL390334.1-201ENST00000556395 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
AL390334.1-201ENST00000556395 XIRP2A4UGR9 3374 aa2.2□□□□□ -2.06
AL390334.1-201ENST00000556395 COL12A1Q99715 3063 aa2.2□□□□□ -2.06
AL390334.1-201ENST00000556395 DMXL1Q9Y485 3027 aa2.2□□□□□ -2.06
AL390334.1-201ENST00000556395 AKAP9Q99996 3911 aa2.2□□□□□ -2.06
AL390334.1-201ENST00000556395 MUC6Q6W4X9 2439 aa2.19□□□□□ -2.06
AL390334.1-201ENST00000556395 COL6A5A8TX70 2615 aa2.19□□□□□ -2.06
AL390334.1-201ENST00000556395 DEFB4AO15263 64 aa2.19□□□□□ -2.06
AL390334.1-201ENST00000556395 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
AL390334.1-201ENST00000556395 DMDP11532 3685 aa2.19□□□□□ -2.06
AL390334.1-201ENST00000556395 SPG11Q96JI7 2443 aa2.19□□□□□ -2.06
AL390334.1-201ENST00000556395 LRBAP50851 2863 aa2.19□□□□□ -2.06
AL390334.1-201ENST00000556395 CHD9Q3L8U1 2897 aa2.18□□□□□ -2.06
AL390334.1-201ENST00000556395 RPS29P62273 56 aaKnown RBP2.18□□□□□ -2.06
AL390334.1-201ENST00000556395 TRANK1O15050 2925 aa2.18□□□□□ -2.06
AL390334.1-201ENST00000556395 CCDC168Q8NDH2 2452 aa2.18□□□□□ -2.06
AL390334.1-201ENST00000556395 NBPF19A0A087WUL8 3843 aa2.18□□□□□ -2.06
AL390334.1-201ENST00000556395 ANKHD1Q8IWZ3 2542 aaKnown RBP2.18□□□□□ -2.06
AL390334.1-201ENST00000556395 NCOR2Q9Y618 2525 aa2.17□□□□□ -2.06
AL390334.1-201ENST00000556395 LAMA2P24043 3122 aaKnown RBP2.17□□□□□ -2.06
AL390334.1-201ENST00000556395 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
AL390334.1-201ENST00000556395 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
AL390334.1-201ENST00000556395 SRRM2Q9UQ35 2752 aaKnown RBP2.16□□□□□ -2.06
AL390334.1-201ENST00000556395 NBASA2RRP1 2371 aa2.16□□□□□ -2.06
AL390334.1-201ENST00000556395 KRTAP10-10P60014 251 aa2.16□□□□□ -2.06
AL390334.1-201ENST00000556395 DNAH12Q6ZR08 3092 aa2.16□□□□□ -2.06
AL390334.1-201ENST00000556395 CREBBPQ92793 2442 aa2.16□□□□□ -2.06
AL390334.1-201ENST00000556395 CELSR3Q9NYQ7 3312 aa2.16□□□□□ -2.06
AL390334.1-201ENST00000556395 ZFHX4Q86UP3 3567 aa2.15□□□□□ -2.07
AL390334.1-201ENST00000556395 HIVEP3Q5T1R4 2406 aa2.15□□□□□ -2.07
AL390334.1-201ENST00000556395 NAV2Q8IVL1 2488 aa2.15□□□□□ -2.07
AL390334.1-201ENST00000556395 KRTAP10-1P60331 282 aa2.14□□□□□ -2.07
AL390334.1-201ENST00000556395 EP400Q96L91 3159 aa2.13□□□□□ -2.07
AL390334.1-201ENST00000556395 RIF1Q5UIP0 2472 aaKnown RBP2.13□□□□□ -2.07
AL390334.1-201ENST00000556395 DNAH14Q0VDD8 3507 aa2.12□□□□□ -2.07
AL390334.1-201ENST00000556395 NF1P21359 2839 aa2.12□□□□□ -2.07
AL390334.1-201ENST00000556395 MEGF8Q7Z7M0 2845 aa2.11□□□□□ -2.07
AL390334.1-201ENST00000556395 LAMA1P25391 3075 aa2.11□□□□□ -2.07
AL390334.1-201ENST00000556395 PKD1L2Q7Z442 2459 aa2.11□□□□□ -2.07
AL390334.1-201ENST00000556395 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
AL390334.1-201ENST00000556395 TNP1P09430 55 aa2.1□□□□□ -2.07
AL390334.1-201ENST00000556395 DMBT1Q9UGM3 2413 aaPredicted RBP2.1□□□□□ -2.07
AL390334.1-201ENST00000556395 CEP290O15078 2479 aa2.1□□□□□ -2.07
AL390334.1-201ENST00000556395 FREM2Q5SZK8 3169 aa2.09□□□□□ -2.07
AL390334.1-201ENST00000556395 PTPN13Q12923 2485 aa2.09□□□□□ -2.07
AL390334.1-201ENST00000556395 RELNP78509 3460 aa2.08□□□□□ -2.08
AL390334.1-201ENST00000556395 SONP18583 2426 aaKnown RBP2.08□□□□□ -2.08
AL390334.1-201ENST00000556395 ATMQ13315 3056 aa2.08□□□□□ -2.08
AL390334.1-201ENST00000556395 MYCBP2O75592 4640 aa2.08□□□□□ -2.08
AL390334.1-201ENST00000556395 DMXL2Q8TDJ6 3036 aa2.08□□□□□ -2.08
AL390334.1-201ENST00000556395 CSMD1Q96PZ7 3565 aa2.08□□□□□ -2.08
AL390334.1-201ENST00000556395 LOC400499M0QZD8 3231 aa2.06□□□□□ -2.08
AL390334.1-201ENST00000556395 WDFY3Q8IZQ1 3526 aa2.06□□□□□ -2.08
AL390334.1-201ENST00000556395 LAMA5O15230 3695 aa2.06□□□□□ -2.08
AL390334.1-201ENST00000556395 SPENQ96T58 3664 aaKnown RBP2.06□□□□□ -2.08
AL390334.1-201ENST00000556395 SETD2Q9BYW2 2564 aaPredicted RBP2.06□□□□□ -2.08
AL390334.1-201ENST00000556395 TTC28Q96AY4 2481 aa2.05□□□□□ -2.08
AL390334.1-201ENST00000556395 FRAS1Q86XX4 4008 aa2.04□□□□□ -2.08
AL390334.1-201ENST00000556395 APCP25054 2843 aa2.03□□□□□ -2.08
AL390334.1-201ENST00000556395 C9orf92A6NGG3 77 aa2.03□□□□□ -2.08
AL390334.1-201ENST00000556395 LAMA3Q16787 3333 aa2.03□□□□□ -2.08
AL390334.1-201ENST00000556395 TACC2O95359 2948 aa2.03□□□□□ -2.08
AL390334.1-201ENST00000556395 DCHS2Q6V1P9 2916 aa2.02□□□□□ -2.09
AL390334.1-201ENST00000556395 DNAH1Q9P2D7 4330 aa2.02□□□□□ -2.09
AL390334.1-201ENST00000556395 SMR3AQ99954 134 aa2.01□□□□□ -2.09
AL390334.1-201ENST00000556395 TLN1Q9Y490 2541 aaKnown RBP2.01□□□□□ -2.09
AL390334.1-201ENST00000556395 NIPBLQ6KC79 2804 aaeCLIP2.01□□□□□ -2.09
AL390334.1-201ENST00000556395 DNAH8Q96JB1 4490 aa2.01□□□□□ -2.09
AL390334.1-201ENST00000556395 ABCA12Q86UK0 2595 aa2.01□□□□□ -2.09
AL390334.1-201ENST00000556395 SPTAN1Q13813 2472 aaKnown RBP2□□□□□ -2.09
AL390334.1-201ENST00000556395 VCANP13611 3396 aa2□□□□□ -2.09
AL390334.1-201ENST00000556395 COL7A1Q02388 2944 aa1.99□□□□□ -2.09
AL390334.1-201ENST00000556395 LRRK2Q5S007 2527 aa1.98□□□□□ -2.09
AL390334.1-201ENST00000556395 TEX15Q9BXT5 2789 aa1.98□□□□□ -2.09
AL390334.1-201ENST00000556395 BSNQ9UPA5 3926 aa1.98□□□□□ -2.09
AL390334.1-201ENST00000556395 ASPMQ8IZT6 3477 aa1.97□□□□□ -2.09
AL390334.1-201ENST00000556395 ITPR3Q14573 2671 aa1.97□□□□□ -2.09
AL390334.1-201ENST00000556395 CENPEQ02224 2701 aa1.97□□□□□ -2.09
AL390334.1-201ENST00000556395 DOPEY1Q5JWR5 2465 aa1.95□□□□□ -2.1
AL390334.1-201ENST00000556395 USP9XQ93008 2570 aaPredicted RBP1.95□□□□□ -2.1
AL390334.1-201ENST00000556395 TGP01266 2768 aa1.95□□□□□ -2.1
AL390334.1-201ENST00000556395 BRCA2P51587 3418 aa1.95□□□□□ -2.1
AL390334.1-201ENST00000556395 TLN2Q9Y4G6 2542 aa1.94□□□□□ -2.1
AL390334.1-201ENST00000556395 SMG1Q96Q15 3661 aaKnown RBP1.94□□□□□ -2.1
AL390334.1-201ENST00000556395 CDH23Q9H251 3354 aa1.93□□□□□ -2.1
AL390334.1-201ENST00000556395 UTP20O75691 2785 aaKnown RBP1.93□□□□□ -2.1
AL390334.1-201ENST00000556395 TENM4Q6N022 2769 aa1.93□□□□□ -2.1
AL390334.1-201ENST00000556395 HECTD1Q9ULT8 2610 aa1.92□□□□□ -2.1
AL390334.1-201ENST00000556395 USP9YO00507 2555 aaPredicted RBP1.92□□□□□ -2.1
AL390334.1-201ENST00000556395 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
AL390334.1-201ENST00000556395 ACANP16112 2415 aa1.92□□□□□ -2.1
AL390334.1-201ENST00000556395 HELZ2Q9BYK8 2649 aaKnown RBP1.92□□□□□ -2.1
AL390334.1-201ENST00000556395 CFAP46Q8IYW2 2715 aa1.92□□□□□ -2.1
AL390334.1-201ENST00000556395 TRRAPQ9Y4A5 3859 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms