RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 KRTAP13-2Q52LG2 175 aa3.72□□□□□ -1.81
HIF1A-208ENST00000556237 Q5VSD8 79 aa3.72□□□□□ -1.81
HIF1A-208ENST00000556237 Q6Q795 121 aa3.72□□□□□ -1.81
HIF1A-208ENST00000556237 Q6ZVQ6 151 aa3.72□□□□□ -1.81
HIF1A-208ENST00000556237 IGKV3D-7A0A0C4DH55 119 aa3.71□□□□□ -1.82
HIF1A-208ENST00000556237 TRBV7-7A0A0K0K1E9 115 aa3.71□□□□□ -1.82
HIF1A-208ENST00000556237 MT-ATP8P03928 68 aa3.71□□□□□ -1.82
HIF1A-208ENST00000556237 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.82
HIF1A-208ENST00000556237 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
HIF1A-208ENST00000556237 RYR3Q15413 4870 aa3.7□□□□□ -1.82
HIF1A-208ENST00000556237 APOBP04114 4563 aaKnown RBP3.69□□□□□ -1.82
HIF1A-208ENST00000556237 CD164Q04900 197 aa3.69□□□□□ -1.82
HIF1A-208ENST00000556237 BPY2O14599 106 aa3.68□□□□□ -1.82
HIF1A-208ENST00000556237 DEFB116Q30KQ4 102 aa3.68□□□□□ -1.82
HIF1A-208ENST00000556237 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
HIF1A-208ENST00000556237 PKHD1P08F94 4074 aa3.67□□□□□ -1.82
HIF1A-208ENST00000556237 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
HIF1A-208ENST00000556237 HIST1H4AP62805 103 aaKnown RBP3.66□□□□□ -1.82
HIF1A-208ENST00000556237 CXCL6P80162 114 aa3.66□□□□□ -1.82
HIF1A-208ENST00000556237 ATP5EP2Q5VTU8 51 aa3.66□□□□□ -1.82
HIF1A-208ENST00000556237 SPAG11AQ6PDA7 123 aa3.66□□□□□ -1.82
HIF1A-208ENST00000556237 IMUPQ9GZP8 106 aa3.66□□□□□ -1.82
HIF1A-208ENST00000556237 LINC00472Q9H8W2 130 aa3.66□□□□□ -1.82
HIF1A-208ENST00000556237 SS18L2Q9UHA2 77 aa3.66□□□□□ -1.82
HIF1A-208ENST00000556237 SPINK1P00995 79 aa3.65□□□□□ -1.83
HIF1A-208ENST00000556237 Q75L30 129 aa3.65□□□□□ -1.83
HIF1A-208ENST00000556237 LINC00304Q8N9R0 145 aa3.65□□□□□ -1.83
HIF1A-208ENST00000556237 VPS13BQ7Z7G8 4022 aa3.65□□□□□ -1.83
HIF1A-208ENST00000556237 IGKV4-1P06312 121 aa3.64□□□□□ -1.83
HIF1A-208ENST00000556237 DSCR10P59022 87 aa3.64□□□□□ -1.83
HIF1A-208ENST00000556237 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
HIF1A-208ENST00000556237 FAT1Q14517 4588 aa3.64□□□□□ -1.83
HIF1A-208ENST00000556237 SRRM2Q9UQ35 2752 aaKnown RBP3.64□□□□□ -1.83
HIF1A-208ENST00000556237 J3KT08 172 aa3.63□□□□□ -1.83
HIF1A-208ENST00000556237 ASB16-AS1Q495Z4 193 aa3.63□□□□□ -1.83
HIF1A-208ENST00000556237 Q5XG85 94 aa3.63□□□□□ -1.83
HIF1A-208ENST00000556237 Q8N9L7 120 aa3.63□□□□□ -1.83
HIF1A-208ENST00000556237 LIMD2Q9BT23 127 aa3.63□□□□□ -1.83
HIF1A-208ENST00000556237 A0A087WVE0 104 aa3.62□□□□□ -1.83
HIF1A-208ENST00000556237 NDUFB1O75438 58 aa3.62□□□□□ -1.83
HIF1A-208ENST00000556237 Q96NJ1 140 aa3.62□□□□□ -1.83
HIF1A-208ENST00000556237 HSPG2P98160 4391 aa3.61□□□□□ -1.83
HIF1A-208ENST00000556237 RYR1P21817 5038 aa3.61□□□□□ -1.83
HIF1A-208ENST00000556237 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
HIF1A-208ENST00000556237 A8MWP4 228 aa3.61□□□□□ -1.83
HIF1A-208ENST00000556237 K7EQZ3 153 aa3.61□□□□□ -1.83
HIF1A-208ENST00000556237 C1orf195Q5TG92 126 aa3.61□□□□□ -1.83
HIF1A-208ENST00000556237 RPS29P62273 56 aaKnown RBP3.6□□□□□ -1.83
HIF1A-208ENST00000556237 PRR15Q8IV56 129 aa3.6□□□□□ -1.83
HIF1A-208ENST00000556237 FAM236AA0A1B0GUQ0 79 aa3.59□□□□□ -1.83
HIF1A-208ENST00000556237 FAM236BA0A1B0GV22 79 aa3.59□□□□□ -1.83
HIF1A-208ENST00000556237 OXTP01178 125 aa3.59□□□□□ -1.83
HIF1A-208ENST00000556237 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.84
HIF1A-208ENST00000556237 EPPK1P58107 5090 aaKnown RBP3.59□□□□□ -1.84
HIF1A-208ENST00000556237 IGHV6-1A0A0B4J1U7 121 aa3.58□□□□□ -1.84
HIF1A-208ENST00000556237 A0A1B0GVX0 72 aa3.58□□□□□ -1.84
HIF1A-208ENST00000556237 KIAA1109Q2LD37 5005 aa3.57□□□□□ -1.84
HIF1A-208ENST00000556237 MT1HL1P0DM35 61 aa3.57□□□□□ -1.84
HIF1A-208ENST00000556237 WFDC13Q8IUB5 93 aa3.57□□□□□ -1.84
HIF1A-208ENST00000556237 HCG22E2RYF7 251 aa3.56□□□□□ -1.84
HIF1A-208ENST00000556237 LINC00313P59037 77 aa3.56□□□□□ -1.84
HIF1A-208ENST00000556237 C8orf17Q9NRJ1 99 aa3.56□□□□□ -1.84
HIF1A-208ENST00000556237 MMP24-AS1A0A0U1RRL7 71 aa3.55□□□□□ -1.84
HIF1A-208ENST00000556237 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
HIF1A-208ENST00000556237 ATOX1O00244 68 aa3.55□□□□□ -1.84
HIF1A-208ENST00000556237 CASC2Q6XLA1 102 aa3.55□□□□□ -1.84
HIF1A-208ENST00000556237 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
HIF1A-208ENST00000556237 RETNLBQ9BQ08 111 aa3.55□□□□□ -1.84
HIF1A-208ENST00000556237 hDV103S1A0JD37 113 aa3.54□□□□□ -1.84
HIF1A-208ENST00000556237 ANAPC13Q9BS18 74 aa3.54□□□□□ -1.84
HIF1A-208ENST00000556237 FLG2Q5D862 2391 aaPredicted RBP3.54□□□□□ -1.84
HIF1A-208ENST00000556237 SMIM20Q8N5G0 67 aa3.52□□□□□ -1.85
HIF1A-208ENST00000556237 TMEM254Q8TBM7 123 aa3.52□□□□□ -1.85
HIF1A-208ENST00000556237 MRPL34Q9BQ48 92 aaKnown RBP3.52□□□□□ -1.85
HIF1A-208ENST00000556237 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
HIF1A-208ENST00000556237 TRAV7A0A075B6U4 112 aa3.51□□□□□ -1.85
HIF1A-208ENST00000556237 NDUFS5O43920 106 aa3.51□□□□□ -1.85
HIF1A-208ENST00000556237 SERP2Q8N6R1 65 aa3.51□□□□□ -1.85
HIF1A-208ENST00000556237 DMBT1Q9UGM3 2413 aaPredicted RBP3.5□□□□□ -1.85
HIF1A-208ENST00000556237 IGLV7-46A0A075B6I9 117 aa3.5□□□□□ -1.85
HIF1A-208ENST00000556237 C9orf92A6NGG3 77 aa3.5□□□□□ -1.85
HIF1A-208ENST00000556237 COX7CP15954 63 aa3.49□□□□□ -1.85
HIF1A-208ENST00000556237 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
HIF1A-208ENST00000556237 PRR4Q16378 134 aa3.49□□□□□ -1.85
HIF1A-208ENST00000556237 FP248Q71RG6 208 aaPredicted RBP3.49□□□□□ -1.85
HIF1A-208ENST00000556237 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
HIF1A-208ENST00000556237 FAT3Q8TDW7 4589 aa3.49□□□□□ -1.85
HIF1A-208ENST00000556237 LRP1Q07954 4544 aaKnown RBP3.48□□□□□ -1.85
HIF1A-208ENST00000556237 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
HIF1A-208ENST00000556237 UQCRQO14949 82 aa3.48□□□□□ -1.85
HIF1A-208ENST00000556237 TP53AIP1Q9HCN2 124 aa3.48□□□□□ -1.85
HIF1A-208ENST00000556237 TNXBP22105 4242 aa3.47□□□□□ -1.85
HIF1A-208ENST00000556237 C5orf47Q569G3 176 aa3.47□□□□□ -1.85
HIF1A-208ENST00000556237 CCDC179H3BU77 68 aa3.46□□□□□ -1.86
HIF1A-208ENST00000556237 C20orf197Q8N268 126 aa3.45□□□□□ -1.86
HIF1A-208ENST00000556237 HERC2O95714 4834 aa3.45□□□□□ -1.86
HIF1A-208ENST00000556237 H0Y9P7 68 aa3.44□□□□□ -1.86
HIF1A-208ENST00000556237 MP68P56378 58 aa3.44□□□□□ -1.86
HIF1A-208ENST00000556237 Q5W150 140 aa3.44□□□□□ -1.86
HIF1A-208ENST00000556237 A8MUU9 505 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms