RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 A8MWP4 228 aa4.9□□□□□ -1.63
ATXN3-235ENST00000556082 K7EQZ3 153 aa4.9□□□□□ -1.63
ATXN3-235ENST00000556082 OCR1Q9BZK8 76 aa4.9□□□□□ -1.63
ATXN3-235ENST00000556082 ANAPC11Q9NYG5 84 aa4.9□□□□□ -1.63
ATXN3-235ENST00000556082 SACSQ9NZJ4 4579 aa4.89□□□□□ -1.63
ATXN3-235ENST00000556082 PRR15Q8IV56 129 aa4.89□□□□□ -1.63
ATXN3-235ENST00000556082 HYDINQ4G0P3 5121 aa4.89□□□□□ -1.63
ATXN3-235ENST00000556082 HCG22E2RYF7 251 aa4.88□□□□□ -1.63
ATXN3-235ENST00000556082 ASB16-AS1Q495Z4 193 aa4.88□□□□□ -1.63
ATXN3-235ENST00000556082 Q96NJ1 140 aa4.88□□□□□ -1.63
ATXN3-235ENST00000556082 DEFB116Q30KQ4 102 aa4.87□□□□□ -1.63
ATXN3-235ENST00000556082 Q5XG85 94 aa4.87□□□□□ -1.63
ATXN3-235ENST00000556082 NDUFB1O75438 58 aa4.86□□□□□ -1.63
ATXN3-235ENST00000556082 KRTAP1-4P0C5Y4 121 aa4.86□□□□□ -1.63
ATXN3-235ENST00000556082 KLKP1Q107X0 134 aa4.86□□□□□ -1.63
ATXN3-235ENST00000556082 SPINK6Q6UWN8 80 aa4.86□□□□□ -1.63
ATXN3-235ENST00000556082 LRP1BQ9NZR2 4599 aa4.85□□□□□ -1.63
ATXN3-235ENST00000556082 KRTAP13-2Q52LG2 175 aa4.84□□□□□ -1.63
ATXN3-235ENST00000556082 HRCT1Q6UXD1 115 aa4.84□□□□□ -1.63
ATXN3-235ENST00000556082 A0A087X002 238 aa4.83□□□□□ -1.64
ATXN3-235ENST00000556082 NDUFC1O43677 76 aa4.83□□□□□ -1.64
ATXN3-235ENST00000556082 C20orf197Q8N268 126 aa4.83□□□□□ -1.64
ATXN3-235ENST00000556082 TMEM258P61165 79 aa4.82□□□□□ -1.64
ATXN3-235ENST00000556082 C5orf47Q569G3 176 aa4.82□□□□□ -1.64
ATXN3-235ENST00000556082 CASC2Q6XLA1 102 aa4.82□□□□□ -1.64
ATXN3-235ENST00000556082 A0A0U1RQV1 116 aa4.81□□□□□ -1.64
ATXN3-235ENST00000556082 A0A1B0GVX0 72 aa4.81□□□□□ -1.64
ATXN3-235ENST00000556082 CDK2AP2O75956 126 aa4.81□□□□□ -1.64
ATXN3-235ENST00000556082 TMEM254Q8TBM7 123 aa4.81□□□□□ -1.64
ATXN3-235ENST00000556082 CYSTM1Q9H1C7 97 aa4.81□□□□□ -1.64
ATXN3-235ENST00000556082 DYNC1H1Q14204 4646 aaKnown RBP4.81□□□□□ -1.64
ATXN3-235ENST00000556082 MMP24-AS1A0A0U1RRL7 71 aa4.8□□□□□ -1.64
ATXN3-235ENST00000556082 KRTAP10-4P60372 401 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-235ENST00000556082 RYR2Q92736 4967 aa4.8□□□□□ -1.64
ATXN3-235ENST00000556082 WFDC13Q8IUB5 93 aa4.79□□□□□ -1.64
ATXN3-235ENST00000556082 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
ATXN3-235ENST00000556082 hDV103S1A0JD37 113 aa4.78□□□□□ -1.64
ATXN3-235ENST00000556082 H7BZZ5 65 aa4.78□□□□□ -1.64
ATXN3-235ENST00000556082 SPINK1P00995 79 aa4.78□□□□□ -1.64
ATXN3-235ENST00000556082 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
ATXN3-235ENST00000556082 LIMD2Q9BT23 127 aa4.78□□□□□ -1.64
ATXN3-235ENST00000556082 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
ATXN3-235ENST00000556082 H3BPC8 53 aa4.77□□□□□ -1.65
ATXN3-235ENST00000556082 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
ATXN3-235ENST00000556082 SPAG11AQ6PDA7 123 aa4.77□□□□□ -1.65
ATXN3-235ENST00000556082 TYMSOSQ8TAI1 123 aa4.77□□□□□ -1.65
ATXN3-235ENST00000556082 ZCCHC13Q8WW36 166 aaKnown RBP4.77□□□□□ -1.65
ATXN3-235ENST00000556082 C8orf87E5RJ46 101 aa4.76□□□□□ -1.65
ATXN3-235ENST00000556082 SMR3BP02814 79 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-235ENST00000556082 C1orf195Q5TG92 126 aa4.76□□□□□ -1.65
ATXN3-235ENST00000556082 SNURFQ9Y675 71 aa4.76□□□□□ -1.65
ATXN3-235ENST00000556082 VPS13BQ7Z7G8 4022 aa4.75□□□□□ -1.65
ATXN3-235ENST00000556082 IGHV6-1A0A0B4J1U7 121 aa4.75□□□□□ -1.65
ATXN3-235ENST00000556082 MP68P56378 58 aa4.75□□□□□ -1.65
ATXN3-235ENST00000556082 MRPL34Q9BQ48 92 aaKnown RBP4.74□□□□□ -1.65
ATXN3-235ENST00000556082 PKHD1P08F94 4074 aa4.73□□□□□ -1.65
ATXN3-235ENST00000556082 ATP5EP56381 51 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-235ENST00000556082 FAM236DA0A1B0GTK5 79 aa4.72□□□□□ -1.65
ATXN3-235ENST00000556082 FAM236CP0DP71 79 aa4.72□□□□□ -1.65
ATXN3-235ENST00000556082 PRR26Q8N8Z3 221 aa4.72□□□□□ -1.65
ATXN3-235ENST00000556082 LINC00304Q8N9R0 145 aa4.72□□□□□ -1.65
ATXN3-235ENST00000556082 KMT2CQ8NEZ4 4911 aaKnown RBP4.72□□□□□ -1.65
ATXN3-235ENST00000556082 APOBP04114 4563 aaKnown RBP4.72□□□□□ -1.65
ATXN3-235ENST00000556082 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-235ENST00000556082 NOTCH2NLQ7Z3S9 236 aa4.71□□□□□ -1.66
ATXN3-235ENST00000556082 KRTAP2-2Q9BYT5 123 aa4.71□□□□□ -1.66
ATXN3-235ENST00000556082 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
ATXN3-235ENST00000556082 TRAV22A0A0B4J277 110 aa4.7□□□□□ -1.66
ATXN3-235ENST00000556082 H0Y9P7 68 aa4.7□□□□□ -1.66
ATXN3-235ENST00000556082 LINC00313P59037 77 aa4.7□□□□□ -1.66
ATXN3-235ENST00000556082 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-235ENST00000556082 LINC00208Q96KT6 92 aa4.68□□□□□ -1.66
ATXN3-235ENST00000556082 C1orf64Q8NEQ6 169 aa4.67□□□□□ -1.66
ATXN3-235ENST00000556082 SERP1Q9Y6X1 66 aa4.67□□□□□ -1.66
ATXN3-235ENST00000556082 KRTAP16-1A8MUX0 517 aa4.66□□□□□ -1.66
ATXN3-235ENST00000556082 NDUFS5O43920 106 aa4.66□□□□□ -1.66
ATXN3-235ENST00000556082 SPANXA2-OT1Q8N9U9 137 aa4.66□□□□□ -1.66
ATXN3-235ENST00000556082 KRTAP13-3Q3SY46 172 aa4.65□□□□□ -1.67
ATXN3-235ENST00000556082 MPLKIPQ8TAP9 179 aa4.65□□□□□ -1.67
ATXN3-235ENST00000556082 FAT1Q14517 4588 aa4.65□□□□□ -1.67
ATXN3-235ENST00000556082 KRTAP10-8P60410 259 aa4.64□□□□□ -1.67
ATXN3-235ENST00000556082 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
ATXN3-235ENST00000556082 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
ATXN3-235ENST00000556082 Q5VSD8 79 aa4.63□□□□□ -1.67
ATXN3-235ENST00000556082 LOC101927531A0A1B0GV80 90 aa4.62□□□□□ -1.67
ATXN3-235ENST00000556082 Q5W150 140 aa4.61□□□□□ -1.67
ATXN3-235ENST00000556082 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
ATXN3-235ENST00000556082 RYR3Q15413 4870 aa4.6□□□□□ -1.67
ATXN3-235ENST00000556082 IGLV7-46A0A075B6I9 117 aa4.6□□□□□ -1.67
ATXN3-235ENST00000556082 OXTP01178 125 aa4.6□□□□□ -1.67
ATXN3-235ENST00000556082 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
ATXN3-235ENST00000556082 RYR1P21817 5038 aa4.57□□□□□ -1.68
ATXN3-235ENST00000556082 SMIM26A0A096LP01 95 aa4.57□□□□□ -1.68
ATXN3-235ENST00000556082 HSPG2P98160 4391 aa4.56□□□□□ -1.68
ATXN3-235ENST00000556082 C20orf166-AS1Q96NR2 134 aa4.56□□□□□ -1.68
ATXN3-235ENST00000556082 A8MUU9 505 aa4.55□□□□□ -1.68
ATXN3-235ENST00000556082 FP248Q71RG6 208 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-235ENST00000556082 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
ATXN3-235ENST00000556082 MT3P25713 68 aa4.53□□□□□ -1.68
ATXN3-235ENST00000556082 PCOTHQ58A44 107 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms