RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 UQCR10Q9UDW1 63 aa3.33□□□□□ -1.88
TMEM260-209ENST00000556079 Q6Q795 121 aa3.32□□□□□ -1.88
TMEM260-209ENST00000556079 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
TMEM260-209ENST00000556079 TEN1Q86WV5 123 aa3.31□□□□□ -1.88
TMEM260-209ENST00000556079 SIGMAR1Q99720 223 aa3.31□□□□□ -1.88
TMEM260-209ENST00000556079 ORMDL1Q9P0S3 153 aa3.31□□□□□ -1.88
TMEM260-209ENST00000556079 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
TMEM260-209ENST00000556079 A0A1B0GX51 115 aa3.29□□□□□ -1.88
TMEM260-209ENST00000556079 M0R2T5 61 aa3.29□□□□□ -1.88
TMEM260-209ENST00000556079 DNAL4O96015 105 aa3.29□□□□□ -1.88
TMEM260-209ENST00000556079 COX6B2Q6YFQ2 88 aa3.29□□□□□ -1.88
TMEM260-209ENST00000556079 ANKRD29Q8N6D5 301 aa3.29□□□□□ -1.88
TMEM260-209ENST00000556079 MPLKIPQ8TAP9 179 aa3.29□□□□□ -1.88
TMEM260-209ENST00000556079 VPS25Q9BRG1 176 aa3.29□□□□□ -1.88
TMEM260-209ENST00000556079 LOC105371267A0A1B0GV96 52 aa3.28□□□□□ -1.88
TMEM260-209ENST00000556079 PCP4L1A6NKN8 68 aa3.28□□□□□ -1.88
TMEM260-209ENST00000556079 A8MUU9 505 aa3.28□□□□□ -1.88
TMEM260-209ENST00000556079 CCKP06307 115 aa3.28□□□□□ -1.88
TMEM260-209ENST00000556079 IGKV4-1P06312 121 aa3.28□□□□□ -1.88
TMEM260-209ENST00000556079 C20orf166-AS1Q96NR2 134 aa3.28□□□□□ -1.88
TMEM260-209ENST00000556079 SS18L2Q9UHA2 77 aa3.28□□□□□ -1.88
TMEM260-209ENST00000556079 SNCGO76070 127 aa3.27□□□□□ -1.89
TMEM260-209ENST00000556079 SCGB1C2P0DMR2 95 aa3.27□□□□□ -1.89
TMEM260-209ENST00000556079 SEC61GP60059 68 aa3.27□□□□□ -1.89
TMEM260-209ENST00000556079 ATP11AUNQ6ZP68 121 aa3.27□□□□□ -1.89
TMEM260-209ENST00000556079 LINC00472Q9H8W2 130 aa3.27□□□□□ -1.89
TMEM260-209ENST00000556079 IGHV6-1A0A0B4J1U7 121 aa3.26□□□□□ -1.89
TMEM260-209ENST00000556079 TRBV7-4A0A0J9YYF1 115 aa3.26□□□□□ -1.89
TMEM260-209ENST00000556079 TRACP01848 142 aa3.26□□□□□ -1.89
TMEM260-209ENST00000556079 COX6CP09669 75 aa3.26□□□□□ -1.89
TMEM260-209ENST00000556079 BAALC-AS2P0C853 105 aa3.26□□□□□ -1.89
TMEM260-209ENST00000556079 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
TMEM260-209ENST00000556079 BATFQ16520 125 aa3.25□□□□□ -1.89
TMEM260-209ENST00000556079 TMEM256-PLSCR3K7ERE1 68 aa3.24□□□□□ -1.89
TMEM260-209ENST00000556079 LINC00313P59037 77 aa3.24□□□□□ -1.89
TMEM260-209ENST00000556079 MTURNQ8N3F0 131 aa3.24□□□□□ -1.89
TMEM260-209ENST00000556079 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
TMEM260-209ENST00000556079 HRES1P13985 223 aa3.22□□□□□ -1.89
TMEM260-209ENST00000556079 RBM3P98179 157 aaKnown RBP3.22□□□□□ -1.89
TMEM260-209ENST00000556079 C14orf132Q9NPU4 83 aa3.22□□□□□ -1.89
TMEM260-209ENST00000556079 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
TMEM260-209ENST00000556079 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
TMEM260-209ENST00000556079 M0R143 59 aa3.21□□□□□ -1.9
TMEM260-209ENST00000556079 ATXN8Q156A1 80 aa3.21□□□□□ -1.9
TMEM260-209ENST00000556079 Q6ZQT0 140 aa3.21□□□□□ -1.9
TMEM260-209ENST00000556079 Q6ZVQ6 151 aa3.21□□□□□ -1.9
TMEM260-209ENST00000556079 C9JAW5 83 aa3.2□□□□□ -1.9
TMEM260-209ENST00000556079 Q8N9P0 234 aaPredicted RBP3.2□□□□□ -1.9
TMEM260-209ENST00000556079 DSCR8Q96T75 97 aa3.2□□□□□ -1.9
TMEM260-209ENST00000556079 H3BQ85 93 aa3.19□□□□□ -1.9
TMEM260-209ENST00000556079 TAX1BP3O14907 124 aa3.19□□□□□ -1.9
TMEM260-209ENST00000556079 IGKV2-30P06310 120 aa3.19□□□□□ -1.9
TMEM260-209ENST00000556079 LOC110117498A0A087WWA1 95 aa3.18□□□□□ -1.9
TMEM260-209ENST00000556079 IGKV3D-7A0A0C4DH55 119 aa3.18□□□□□ -1.9
TMEM260-209ENST00000556079 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
TMEM260-209ENST00000556079 TSTD3H0UI37 97 aa3.17□□□□□ -1.9
TMEM260-209ENST00000556079 MT2AP02795 61 aa3.17□□□□□ -1.9
TMEM260-209ENST00000556079 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
TMEM260-209ENST00000556079 C8orf17Q9NRJ1 99 aa3.17□□□□□ -1.9
TMEM260-209ENST00000556079 C8orf87E5RJ46 101 aa3.16□□□□□ -1.9
TMEM260-209ENST00000556079 MT1FP04733 61 aa3.16□□□□□ -1.9
TMEM260-209ENST00000556079 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
TMEM260-209ENST00000556079 ZCCHC13Q8WW36 166 aaKnown RBP3.16□□□□□ -1.9
TMEM260-209ENST00000556079 TRBV20-1A0A075B6N2 111 aa3.15□□□□□ -1.91
TMEM260-209ENST00000556079 A0A1W2PPM0 123 aa3.15□□□□□ -1.91
TMEM260-209ENST00000556079 MMP24-AS1A0A0U1RRL7 71 aa3.14□□□□□ -1.91
TMEM260-209ENST00000556079 A8MWP4 228 aa3.14□□□□□ -1.91
TMEM260-209ENST00000556079 JMJD7-PLA2G4BH0Y9G9 81 aa3.14□□□□□ -1.91
TMEM260-209ENST00000556079 K7EQZ3 153 aa3.14□□□□□ -1.91
TMEM260-209ENST00000556079 Q8N9L7 120 aa3.14□□□□□ -1.91
TMEM260-209ENST00000556079 J3KT08 172 aa3.13□□□□□ -1.91
TMEM260-209ENST00000556079 SPINK7P58062 85 aa3.13□□□□□ -1.91
TMEM260-209ENST00000556079 PRR15Q8IV56 129 aa3.12□□□□□ -1.91
TMEM260-209ENST00000556079 BPY2O14599 106 aa3.11□□□□□ -1.91
TMEM260-209ENST00000556079 NDUFB1O75438 58 aa3.11□□□□□ -1.91
TMEM260-209ENST00000556079 NREPQ16612 68 aa3.11□□□□□ -1.91
TMEM260-209ENST00000556079 LYRM7Q5U5X0 104 aa3.11□□□□□ -1.91
TMEM260-209ENST00000556079 WFDC13Q8IUB5 93 aa3.11□□□□□ -1.91
TMEM260-209ENST00000556079 RBM12B-AS1Q9P1G2 102 aa3.11□□□□□ -1.91
TMEM260-209ENST00000556079 SPCS1Q9Y6A9 102 aa3.11□□□□□ -1.91
TMEM260-209ENST00000556079 H3BT86 120 aa3.1□□□□□ -1.91
TMEM260-209ENST00000556079 Q5W150 140 aa3.1□□□□□ -1.91
TMEM260-209ENST00000556079 PRO0461Q9UI25 63 aa3.1□□□□□ -1.91
TMEM260-209ENST00000556079 PDE6GP18545 87 aa3.09□□□□□ -1.91
TMEM260-209ENST00000556079 MRPL34Q9BQ48 92 aaKnown RBP3.09□□□□□ -1.91
TMEM260-209ENST00000556079 NDUFS5O43920 106 aa3.08□□□□□ -1.92
TMEM260-209ENST00000556079 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
TMEM260-209ENST00000556079 TMEM254Q8TBM7 123 aa3.08□□□□□ -1.92
TMEM260-209ENST00000556079 MUC12Q9UKN1 5478 aa3.08□□□□□ -1.92
TMEM260-209ENST00000556079 hDV103S1A0JD37 113 aa3.07□□□□□ -1.92
TMEM260-209ENST00000556079 IGKV2D-30A0A075B6S6 120 aa3.06□□□□□ -1.92
TMEM260-209ENST00000556079 K7EP34 96 aa3.06□□□□□ -1.92
TMEM260-209ENST00000556079 LINC00846Q9NV44 126 aa3.06□□□□□ -1.92
TMEM260-209ENST00000556079 NEBP20929 6669 aa3.05□□□□□ -1.92
TMEM260-209ENST00000556079 A0A1B0GW54 56 aa3.05□□□□□ -1.92
TMEM260-209ENST00000556079 COL5A1-AS1Q5SY13 56 aa3.05□□□□□ -1.92
TMEM260-209ENST00000556079 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
TMEM260-209ENST00000556079 HCG22E2RYF7 251 aa3.04□□□□□ -1.92
TMEM260-209ENST00000556079 CASC2Q6XLA1 102 aa3.04□□□□□ -1.92
TMEM260-209ENST00000556079 C4orf26Q17RF5 130 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms