RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 RRAS2P62070 204 aaPredicted RBP1.12□□□□□ -2.23
EFCAB11-210ENST00000556078 RPS29P62273 56 aaKnown RBP1.12□□□□□ -2.23
EFCAB11-210ENST00000556078 OCIAD2Q56VL3 154 aa1.12□□□□□ -2.23
EFCAB11-210ENST00000556078 RPL7L1Q6DKI1 246 aaKnown RBP1.12□□□□□ -2.23
EFCAB11-210ENST00000556078 SPRR4Q96PI1 79 aa1.12□□□□□ -2.23
EFCAB11-210ENST00000556078 TRAV21A0A0B4J279 112 aa1.11□□□□□ -2.23
EFCAB11-210ENST00000556078 LINC00959A0A1B0GUT2 108 aa1.11□□□□□ -2.23
EFCAB11-210ENST00000556078 H3BVH4 76 aa1.11□□□□□ -2.23
EFCAB11-210ENST00000556078 FGF7P21781 194 aa1.11□□□□□ -2.23
EFCAB11-210ENST00000556078 PKIAP61925 76 aa1.11□□□□□ -2.23
EFCAB11-210ENST00000556078 CSAG1Q6PB30 78 aa1.11□□□□□ -2.23
EFCAB11-210ENST00000556078 TMEM191AQ9H0A3 160 aa1.11□□□□□ -2.23
EFCAB11-210ENST00000556078 TCRBV3S1A0A5B6 114 aa1.1□□□□□ -2.23
EFCAB11-210ENST00000556078 SNCGO76070 127 aa1.1□□□□□ -2.23
EFCAB11-210ENST00000556078 MIC13Q5XKP0 118 aa1.1□□□□□ -2.23
EFCAB11-210ENST00000556078 ATP11AUNQ6ZP68 121 aa1.1□□□□□ -2.23
EFCAB11-210ENST00000556078 Q6ZUT4 128 aa1.1□□□□□ -2.23
EFCAB11-210ENST00000556078 COPS9Q8WXC6 57 aa1.1□□□□□ -2.23
EFCAB11-210ENST00000556078 MRPL35Q9NZE8 188 aaKnown RBP1.1□□□□□ -2.23
EFCAB11-210ENST00000556078 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.09□□□□□ -2.23
EFCAB11-210ENST00000556078 SPAG11BQ08648 103 aa1.09□□□□□ -2.23
EFCAB11-210ENST00000556078 C10orf113Q5VZT2 155 aa1.09□□□□□ -2.23
EFCAB11-210ENST00000556078 C5orf38Q86SI9 138 aa1.09□□□□□ -2.23
EFCAB11-210ENST00000556078 PPDPFLQ8WWR9 84 aa1.09□□□□□ -2.23
EFCAB11-210ENST00000556078 MGST2Q99735 147 aa1.09□□□□□ -2.23
EFCAB11-210ENST00000556078 A0A1B0GV90 55 aa1.08□□□□□ -2.24
EFCAB11-210ENST00000556078 ARMS2P0C7Q2 107 aa1.08□□□□□ -2.24
EFCAB11-210ENST00000556078 MT1XP80297 61 aa1.08□□□□□ -2.24
EFCAB11-210ENST00000556078 ZNF56Q15929 161 aa1.08□□□□□ -2.24
EFCAB11-210ENST00000556078 SPANXN1Q5VSR9 72 aa1.08□□□□□ -2.24
EFCAB11-210ENST00000556078 DMAC1Q96GE9 116 aa1.08□□□□□ -2.24
EFCAB11-210ENST00000556078 FAM167A-AS1Q96KT0 104 aa1.08□□□□□ -2.24
EFCAB11-210ENST00000556078 TMEM242Q9NWH2 141 aa1.08□□□□□ -2.24
EFCAB11-210ENST00000556078 LENEPQ9Y5L5 61 aa1.08□□□□□ -2.24
EFCAB11-210ENST00000556078 HIGD1CA8MV81 97 aa1.07□□□□□ -2.24
EFCAB11-210ENST00000556078 PDE6GP18545 87 aa1.07□□□□□ -2.24
EFCAB11-210ENST00000556078 S100A7L2Q5SY68 101 aa1.07□□□□□ -2.24
EFCAB11-210ENST00000556078 LINC01545Q5VT33 79 aa1.07□□□□□ -2.24
EFCAB11-210ENST00000556078 Q6ZQY7 126 aa1.07□□□□□ -2.24
EFCAB11-210ENST00000556078 SPRR2GQ9BYE4 73 aa1.07□□□□□ -2.24
EFCAB11-210ENST00000556078 FXYD6-FXYD2A0A087WZ82 144 aa1.06□□□□□ -2.24
EFCAB11-210ENST00000556078 CCDC179H3BU77 68 aa1.06□□□□□ -2.24
EFCAB11-210ENST00000556078 CCKP06307 115 aa1.06□□□□□ -2.24
EFCAB11-210ENST00000556078 SLC25A6P12236 298 aa1.06□□□□□ -2.24
EFCAB11-210ENST00000556078 CRIP1P50238 77 aa1.06□□□□□ -2.24
EFCAB11-210ENST00000556078 MEIG1Q5JSS6 88 aa1.06□□□□□ -2.24
EFCAB11-210ENST00000556078 PIGBOS1A0A0B4J2F0 54 aa1.05□□□□□ -2.24
EFCAB11-210ENST00000556078 LOC100130705A0A1B0GUX0 176 aa1.05□□□□□ -2.24
EFCAB11-210ENST00000556078 M0QY20 66 aa1.05□□□□□ -2.24
EFCAB11-210ENST00000556078 NDUFA1O15239 70 aa1.05□□□□□ -2.24
EFCAB11-210ENST00000556078 DLEU1O43261 78 aa1.05□□□□□ -2.24
EFCAB11-210ENST00000556078 AKAIN1P0CW23 69 aa1.05□□□□□ -2.24
EFCAB11-210ENST00000556078 SEC11CQ9BY50 192 aa1.05□□□□□ -2.24
EFCAB11-210ENST00000556078 TRBV30A0A0K0K1B3 111 aa1.04□□□□□ -2.24
EFCAB11-210ENST00000556078 LOC101927531A0A1B0GV80 90 aa1.04□□□□□ -2.24
EFCAB11-210ENST00000556078 NDUFB6O95139 128 aa1.04□□□□□ -2.24
EFCAB11-210ENST00000556078 S100A1P23297 94 aa1.04□□□□□ -2.24
EFCAB11-210ENST00000556078 SSBP3-AS1Q7Z2R9 100 aa1.04□□□□□ -2.24
EFCAB11-210ENST00000556078 SPTSSBQ8NFR3 76 aa1.04□□□□□ -2.24
EFCAB11-210ENST00000556078 NMES1Q9C002 83 aa1.04□□□□□ -2.24
EFCAB11-210ENST00000556078 SCN3BQ9NY72 215 aa1.04□□□□□ -2.24
EFCAB11-210ENST00000556078 TRAV1-2A0A0B4J238 106 aa1.03□□□□□ -2.24
EFCAB11-210ENST00000556078 LINC00575Q6W349 94 aa1.03□□□□□ -2.24
EFCAB11-210ENST00000556078 KRTAP19-3Q7Z4W3 81 aa1.03□□□□□ -2.24
EFCAB11-210ENST00000556078 PPP1R1CQ8WVI7 109 aa1.03□□□□□ -2.24
EFCAB11-210ENST00000556078 IFI27L1Q96BM0 104 aa1.03□□□□□ -2.24
EFCAB11-210ENST00000556078 TMEM141Q96I45 108 aa1.03□□□□□ -2.24
EFCAB11-210ENST00000556078 CDC42SE2Q9NRR3 84 aa1.03□□□□□ -2.24
EFCAB11-210ENST00000556078 A0A1W2PPM0 123 aa1.02□□□□□ -2.25
EFCAB11-210ENST00000556078 LINC00587B1AMM8 73 aa1.02□□□□□ -2.25
EFCAB11-210ENST00000556078 UBE2G1P62253 170 aa1.02□□□□□ -2.25
EFCAB11-210ENST00000556078 MRPS10P82664 201 aaKnown RBP1.02□□□□□ -2.25
EFCAB11-210ENST00000556078 SYNE1Q8NF91 8797 aaKnown RBP1.02□□□□□ -2.25
EFCAB11-210ENST00000556078 TEX49A0A1B0GTD5 131 aa1.01□□□□□ -2.25
EFCAB11-210ENST00000556078 PDCD5O14737 125 aa1.01□□□□□ -2.25
EFCAB11-210ENST00000556078 MGPP08493 103 aa1.01□□□□□ -2.25
EFCAB11-210ENST00000556078 C2orf88Q9BSF0 95 aa1.01□□□□□ -2.25
EFCAB11-210ENST00000556078 PSENENQ9NZ42 101 aa1.01□□□□□ -2.25
EFCAB11-210ENST00000556078 AP4S1Q9Y587 144 aa1.01□□□□□ -2.25
EFCAB11-210ENST00000556078 C9orf153Q5TBE3 101 aa1□□□□□ -2.25
EFCAB11-210ENST00000556078 MRPL54Q6P161 138 aaKnown RBP1□□□□□ -2.25
EFCAB11-210ENST00000556078 RPL39LQ96EH5 51 aaKnown RBP1□□□□□ -2.25
EFCAB11-210ENST00000556078 LINC00208Q96KT6 92 aa1□□□□□ -2.25
EFCAB11-210ENST00000556078 SERP1Q9Y6X1 66 aa1□□□□□ -2.25
EFCAB11-210ENST00000556078 SSSCA1O60232 199 aa0.99□□□□□ -2.25
EFCAB11-210ENST00000556078 UBE2L3P68036 154 aaKnown RBP0.99□□□□□ -2.25
EFCAB11-210ENST00000556078 TRBV10-3A0A0K0K1G6 114 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 UBE2L5PA0A1B0GUS4 154 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 GNG4P50150 75 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 NPC2P61916 151 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 KRTAP19-7Q3SYF9 63 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 GTF2H5Q6ZYL4 71 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 C20orf197Q8N268 126 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 SVBPQ8N300 66 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 DSCR8Q96T75 97 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 TCEAL7Q9BRU2 100 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 CACFD1Q9UGQ2 172 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 ARL2-SNX15V9GYD0 113 aa0.98□□□□□ -2.25
EFCAB11-210ENST00000556078 MT1EP04732 61 aa0.97□□□□□ -2.25
EFCAB11-210ENST00000556078 SMIM6P0DI80 62 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms