RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
TDP1-214ENST00000556063 PRO0461Q9UI25 63 aa4.32□□□□□ -1.72
TDP1-214ENST00000556063 C1orf195Q5TG92 126 aa4.31□□□□□ -1.72
TDP1-214ENST00000556063 Q6ZQT0 140 aa4.31□□□□□ -1.72
TDP1-214ENST00000556063 TNXBP22105 4242 aa4.29□□□□□ -1.72
TDP1-214ENST00000556063 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
TDP1-214ENST00000556063 A0A1B0GV90 55 aa4.28□□□□□ -1.72
TDP1-214ENST00000556063 ETDBQ3ZM63 59 aa4.27□□□□□ -1.73
TDP1-214ENST00000556063 CDIP1Q9H305 208 aa4.27□□□□□ -1.73
TDP1-214ENST00000556063 HERC1Q15751 4861 aa4.26□□□□□ -1.73
TDP1-214ENST00000556063 J3KT08 172 aa4.26□□□□□ -1.73
TDP1-214ENST00000556063 NREPQ16612 68 aa4.26□□□□□ -1.73
TDP1-214ENST00000556063 IGKV4-1P06312 121 aa4.25□□□□□ -1.73
TDP1-214ENST00000556063 KRTAP13-3Q3SY46 172 aa4.25□□□□□ -1.73
TDP1-214ENST00000556063 SIGMAR1Q99720 223 aa4.25□□□□□ -1.73
TDP1-214ENST00000556063 LINC00472Q9H8W2 130 aa4.24□□□□□ -1.73
TDP1-214ENST00000556063 NDUFB1O75438 58 aa4.23□□□□□ -1.73
TDP1-214ENST00000556063 Q96NJ1 140 aa4.23□□□□□ -1.73
TDP1-214ENST00000556063 C9orf92A6NGG3 77 aa4.22□□□□□ -1.73
TDP1-214ENST00000556063 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
TDP1-214ENST00000556063 DEFB116Q30KQ4 102 aa4.21□□□□□ -1.74
TDP1-214ENST00000556063 ACYP1P07311 99 aa4.2□□□□□ -1.74
TDP1-214ENST00000556063 C8orf87E5RJ46 101 aa4.19□□□□□ -1.74
TDP1-214ENST00000556063 BPY2O14599 106 aa4.19□□□□□ -1.74
TDP1-214ENST00000556063 LINC00313P59037 77 aa4.19□□□□□ -1.74
TDP1-214ENST00000556063 Q6ZVQ6 151 aa4.19□□□□□ -1.74
TDP1-214ENST00000556063 IGHV6-1A0A0B4J1U7 121 aa4.18□□□□□ -1.74
TDP1-214ENST00000556063 FAM240AA0A1B0GVK7 77 aa4.18□□□□□ -1.74
TDP1-214ENST00000556063 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
TDP1-214ENST00000556063 A8MWP4 228 aa4.18□□□□□ -1.74
TDP1-214ENST00000556063 J3QR89 54 aa4.18□□□□□ -1.74
TDP1-214ENST00000556063 SEC61BP60468 96 aaKnown RBP4.18□□□□□ -1.74
TDP1-214ENST00000556063 LINC00846Q9NV44 126 aa4.18□□□□□ -1.74
TDP1-214ENST00000556063 DSCR10P59022 87 aa4.16□□□□□ -1.74
TDP1-214ENST00000556063 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
TDP1-214ENST00000556063 PRR15Q8IV56 129 aa4.16□□□□□ -1.74
TDP1-214ENST00000556063 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.75
TDP1-214ENST00000556063 IGKV3D-7A0A0C4DH55 119 aa4.14□□□□□ -1.75
TDP1-214ENST00000556063 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
TDP1-214ENST00000556063 C8orf17Q9NRJ1 99 aa4.14□□□□□ -1.75
TDP1-214ENST00000556063 CXCL6P80162 114 aa4.13□□□□□ -1.75
TDP1-214ENST00000556063 ATP11AUNQ6ZP68 121 aa4.13□□□□□ -1.75
TDP1-214ENST00000556063 Q75L30 129 aa4.13□□□□□ -1.75
TDP1-214ENST00000556063 K7EQZ3 153 aa4.12□□□□□ -1.75
TDP1-214ENST00000556063 ATP5EP2Q5VTU8 51 aa4.12□□□□□ -1.75
TDP1-214ENST00000556063 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
TDP1-214ENST00000556063 HMCN2Q8NDA2 5059 aa4.12□□□□□ -1.75
TDP1-214ENST00000556063 A8MUU9 505 aa4.11□□□□□ -1.75
TDP1-214ENST00000556063 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
TDP1-214ENST00000556063 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
TDP1-214ENST00000556063 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
TDP1-214ENST00000556063 LINC00643Q86TS7 51 aa4.1□□□□□ -1.75
TDP1-214ENST00000556063 MMP24-AS1A0A0U1RRL7 71 aa4.09□□□□□ -1.75
TDP1-214ENST00000556063 hDV103S1A0JD37 113 aa4.09□□□□□ -1.75
TDP1-214ENST00000556063 K7ERU9 68 aa4.09□□□□□ -1.75
TDP1-214ENST00000556063 Q8N9L7 120 aa4.09□□□□□ -1.75
TDP1-214ENST00000556063 TMEM254Q8TBM7 123 aa4.09□□□□□ -1.75
TDP1-214ENST00000556063 CASC2Q6XLA1 102 aa4.08□□□□□ -1.76
TDP1-214ENST00000556063 MRPL34Q9BQ48 92 aaKnown RBP4.08□□□□□ -1.76
TDP1-214ENST00000556063 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
TDP1-214ENST00000556063 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
TDP1-214ENST00000556063 WFDC13Q8IUB5 93 aa4.07□□□□□ -1.76
TDP1-214ENST00000556063 Q8N9P0 234 aaPredicted RBP4.07□□□□□ -1.76
TDP1-214ENST00000556063 LRP2P98164 4655 aa4.07□□□□□ -1.76
TDP1-214ENST00000556063 NDUFS5O43920 106 aa4.06□□□□□ -1.76
TDP1-214ENST00000556063 A0A0U1RQV1 116 aa4.05□□□□□ -1.76
TDP1-214ENST00000556063 HIST1H4AP62805 103 aaKnown RBP4.05□□□□□ -1.76
TDP1-214ENST00000556063 LPAP08519 4548 aa4.04□□□□□ -1.76
TDP1-214ENST00000556063 ZCCHC13Q8WW36 166 aaKnown RBP4.04□□□□□ -1.76
TDP1-214ENST00000556063 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
TDP1-214ENST00000556063 TP53AIP1Q9HCN2 124 aa4.01□□□□□ -1.77
TDP1-214ENST00000556063 KRTAP4-1Q9BYQ7 146 aa3.99□□□□□ -1.77
TDP1-214ENST00000556063 IMUPQ9GZP8 106 aa3.98□□□□□ -1.77
TDP1-214ENST00000556063 A0A087WVE0 104 aa3.96□□□□□ -1.78
TDP1-214ENST00000556063 SPINK7P58062 85 aa3.96□□□□□ -1.78
TDP1-214ENST00000556063 RNF213Q63HN8 5207 aa3.96□□□□□ -1.78
TDP1-214ENST00000556063 UQCRQO14949 82 aa3.95□□□□□ -1.78
TDP1-214ENST00000556063 SCGB1A1P11684 91 aa3.95□□□□□ -1.78
TDP1-214ENST00000556063 Q5W150 140 aa3.95□□□□□ -1.78
TDP1-214ENST00000556063 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
TDP1-214ENST00000556063 MT-ATP8P03928 68 aa3.94□□□□□ -1.78
TDP1-214ENST00000556063 C7orf65Q6ZTY9 151 aa3.94□□□□□ -1.78
TDP1-214ENST00000556063 RBM12B-AS1Q9P1G2 102 aa3.94□□□□□ -1.78
TDP1-214ENST00000556063 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
TDP1-214ENST00000556063 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
TDP1-214ENST00000556063 TRAV22A0A0B4J277 110 aa3.92□□□□□ -1.78
TDP1-214ENST00000556063 FAM236DA0A1B0GTK5 79 aa3.92□□□□□ -1.78
TDP1-214ENST00000556063 FAM236CP0DP71 79 aa3.92□□□□□ -1.78
TDP1-214ENST00000556063 ATOX1O00244 68 aa3.91□□□□□ -1.78
TDP1-214ENST00000556063 PCP4P48539 62 aa3.91□□□□□ -1.78
TDP1-214ENST00000556063 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
TDP1-214ENST00000556063 HRES1P13985 223 aa3.9□□□□□ -1.79
TDP1-214ENST00000556063 SMIM20Q8N5G0 67 aa3.9□□□□□ -1.79
TDP1-214ENST00000556063 LOC101927531A0A1B0GV80 90 aa3.89□□□□□ -1.79
TDP1-214ENST00000556063 H0Y9P7 68 aa3.89□□□□□ -1.79
TDP1-214ENST00000556063 MP68P56378 58 aa3.89□□□□□ -1.79
TDP1-214ENST00000556063 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
TDP1-214ENST00000556063 OCR1Q9BZK8 76 aa3.89□□□□□ -1.79
TDP1-214ENST00000556063 FAM236AA0A1B0GUQ0 79 aa3.88□□□□□ -1.79
TDP1-214ENST00000556063 FAM236BA0A1B0GV22 79 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms