RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 IGKV4-1P06312 121 aa10.13□□□□□ -0.79
PSEN1-212ENST00000555254 NDUFB1O75438 58 aa10.12□□□□□ -0.79
PSEN1-212ENST00000555254 LRP2P98164 4655 aa10.11□□□□□ -0.79
PSEN1-212ENST00000555254 DSCR10P59022 87 aa10.08□□□□□ -0.8
PSEN1-212ENST00000555254 Q96NJ1 140 aa10.08□□□□□ -0.8
PSEN1-212ENST00000555254 A8MWP4 228 aa10.07□□□□□ -0.8
PSEN1-212ENST00000555254 C1orf195Q5TG92 126 aa10.06□□□□□ -0.8
PSEN1-212ENST00000555254 Q8N9L7 120 aa10.05□□□□□ -0.8
PSEN1-212ENST00000555254 PRR15Q8IV56 129 aa10.03□□□□□ -0.8
PSEN1-212ENST00000555254 K7EQZ3 153 aa10.02□□□□□ -0.81
PSEN1-212ENST00000555254 A0A087WVE0 104 aa10□□□□□ -0.81
PSEN1-212ENST00000555254 SCGB1A1P11684 91 aa10□□□□□ -0.81
PSEN1-212ENST00000555254 A0A1B0GVX0 72 aa9.99□□□□□ -0.81
PSEN1-212ENST00000555254 IGHV6-1A0A0B4J1U7 121 aa9.98□□□□□ -0.81
PSEN1-212ENST00000555254 FAM236AA0A1B0GUQ0 79 aa9.95□□□□□ -0.82
PSEN1-212ENST00000555254 FAM236BA0A1B0GV22 79 aa9.95□□□□□ -0.82
PSEN1-212ENST00000555254 HCG22E2RYF7 251 aa9.94□□□□□ -0.82
PSEN1-212ENST00000555254 C8orf87E5RJ46 101 aa9.94□□□□□ -0.82
PSEN1-212ENST00000555254 PRR4Q16378 134 aa9.94□□□□□ -0.82
PSEN1-212ENST00000555254 C8orf17Q9NRJ1 99 aa9.92□□□□□ -0.82
PSEN1-212ENST00000555254 CASC2Q6XLA1 102 aa9.9□□□□□ -0.82
PSEN1-212ENST00000555254 WFDC13Q8IUB5 93 aa9.9□□□□□ -0.82
PSEN1-212ENST00000555254 LINC00313P59037 77 aa9.89□□□□□ -0.83
PSEN1-212ENST00000555254 ATOX1O00244 68 aa9.88□□□□□ -0.83
PSEN1-212ENST00000555254 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
PSEN1-212ENST00000555254 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
PSEN1-212ENST00000555254 hDV103S1A0JD37 113 aa9.87□□□□□ -0.83
PSEN1-212ENST00000555254 FP248Q71RG6 208 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-212ENST00000555254 SMIM20Q8N5G0 67 aa9.84□□□□□ -0.83
PSEN1-212ENST00000555254 TMEM254Q8TBM7 123 aa9.83□□□□□ -0.84
PSEN1-212ENST00000555254 NOTCH2NLQ7Z3S9 236 aa9.81□□□□□ -0.84
PSEN1-212ENST00000555254 MRPL34Q9BQ48 92 aaKnown RBP9.8□□□□□ -0.84
PSEN1-212ENST00000555254 ANAPC13Q9BS18 74 aa9.8□□□□□ -0.84
PSEN1-212ENST00000555254 FAT4Q6V0I7 4981 aa9.79□□□□□ -0.84
PSEN1-212ENST00000555254 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
PSEN1-212ENST00000555254 NDUFS5O43920 106 aa9.77□□□□□ -0.85
PSEN1-212ENST00000555254 TRAV7A0A075B6U4 112 aa9.75□□□□□ -0.85
PSEN1-212ENST00000555254 LPAP08519 4548 aa9.75□□□□□ -0.85
PSEN1-212ENST00000555254 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
PSEN1-212ENST00000555254 SERP2Q8N6R1 65 aa9.73□□□□□ -0.85
PSEN1-212ENST00000555254 TP53AIP1Q9HCN2 124 aa9.73□□□□□ -0.85
PSEN1-212ENST00000555254 UQCRQO14949 82 aa9.71□□□□□ -0.86
PSEN1-212ENST00000555254 OCR1Q9BZK8 76 aa9.7□□□□□ -0.86
PSEN1-212ENST00000555254 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
PSEN1-212ENST00000555254 MUC2Q02817 5179 aa9.66□□□□□ -0.86
PSEN1-212ENST00000555254 PCP4P48539 62 aa9.66□□□□□ -0.86
PSEN1-212ENST00000555254 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-212ENST00000555254 COX7CP15954 63 aa9.65□□□□□ -0.86
PSEN1-212ENST00000555254 C5orf47Q569G3 176 aa9.64□□□□□ -0.87
PSEN1-212ENST00000555254 MP68P56378 58 aa9.62□□□□□ -0.87
PSEN1-212ENST00000555254 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
PSEN1-212ENST00000555254 TPRXLQ17RH7 258 aa9.61□□□□□ -0.87
PSEN1-212ENST00000555254 C20orf166-AS1Q96NR2 134 aa9.59□□□□□ -0.87
PSEN1-212ENST00000555254 A8MUU9 505 aa9.58□□□□□ -0.88
PSEN1-212ENST00000555254 H0Y9P7 68 aa9.58□□□□□ -0.88
PSEN1-212ENST00000555254 TRAV22A0A0B4J277 110 aa9.57□□□□□ -0.88
PSEN1-212ENST00000555254 FSIP2Q5CZC0 6907 aa9.55□□□□□ -0.88
PSEN1-212ENST00000555254 Q75L30 129 aa9.55□□□□□ -0.88
PSEN1-212ENST00000555254 H3BPC8 53 aa9.54□□□□□ -0.88
PSEN1-212ENST00000555254 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
PSEN1-212ENST00000555254 LCE2AQ5TA79 106 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-212ENST00000555254 ZCCHC13Q8WW36 166 aaKnown RBP9.52□□□□□ -0.89
PSEN1-212ENST00000555254 CCDC179H3BU77 68 aa9.51□□□□□ -0.89
PSEN1-212ENST00000555254 XP32Q5T750 250 aa9.51□□□□□ -0.89
PSEN1-212ENST00000555254 LINC00208Q96KT6 92 aa9.51□□□□□ -0.89
PSEN1-212ENST00000555254 ATP11AUNQ6ZP68 121 aa9.5□□□□□ -0.89
PSEN1-212ENST00000555254 Q5W150 140 aa9.49□□□□□ -0.89
PSEN1-212ENST00000555254 C1orf64Q8NEQ6 169 aa9.49□□□□□ -0.89
PSEN1-212ENST00000555254 RPL37P61927 97 aaKnown RBP9.48□□□□□ -0.89
PSEN1-212ENST00000555254 A0A0U1RQV1 116 aa9.47□□□□□ -0.89
PSEN1-212ENST00000555254 CRCT1Q9UGL9 99 aa9.47□□□□□ -0.89
PSEN1-212ENST00000555254 SNURFQ9Y675 71 aa9.46□□□□□ -0.9
PSEN1-212ENST00000555254 LOC101927531A0A1B0GV80 90 aa9.45□□□□□ -0.9
PSEN1-212ENST00000555254 KLKP1Q107X0 134 aa9.43□□□□□ -0.9
PSEN1-212ENST00000555254 NDUFC1O43677 76 aa9.41□□□□□ -0.9
PSEN1-212ENST00000555254 IGKV2D-30A0A075B6S6 120 aa9.38□□□□□ -0.91
PSEN1-212ENST00000555254 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
PSEN1-212ENST00000555254 MUC17Q685J3 4493 aa9.36□□□□□ -0.91
PSEN1-212ENST00000555254 SEC61BP60468 96 aaKnown RBP9.36□□□□□ -0.91
PSEN1-212ENST00000555254 CYP4F30PQ9H0H9 118 aa9.35□□□□□ -0.91
PSEN1-212ENST00000555254 C7orf65Q6ZTY9 151 aa9.34□□□□□ -0.91
PSEN1-212ENST00000555254 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
PSEN1-212ENST00000555254 SPINK7P58062 85 aa9.28□□□□□ -0.92
PSEN1-212ENST00000555254 CYSTM1Q9H1C7 97 aa9.28□□□□□ -0.92
PSEN1-212ENST00000555254 H7BZZ5 65 aa9.27□□□□□ -0.93
PSEN1-212ENST00000555254 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
PSEN1-212ENST00000555254 TMEM258P61165 79 aa9.23□□□□□ -0.93
PSEN1-212ENST00000555254 KRTAP4-1Q9BYQ7 146 aa9.22□□□□□ -0.93
PSEN1-212ENST00000555254 SPANXA2-OT1Q8N9U9 137 aa9.2□□□□□ -0.94
PSEN1-212ENST00000555254 HRES1P13985 223 aa9.19□□□□□ -0.94
PSEN1-212ENST00000555254 ATP5EP56381 51 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-212ENST00000555254 FAM236DA0A1B0GTK5 79 aa9.16□□□□□ -0.94
PSEN1-212ENST00000555254 FAM236CP0DP71 79 aa9.16□□□□□ -0.94
PSEN1-212ENST00000555254 C4orf26Q17RF5 130 aa9.1□□□□□ -0.95
PSEN1-212ENST00000555254 KRTAP9-7A8MTY7 169 aa9.06□□□□□ -0.96
PSEN1-212ENST00000555254 RBM12B-AS1Q9P1G2 102 aa9.05□□□□□ -0.96
PSEN1-212ENST00000555254 ACYP2P14621 99 aa9.04□□□□□ -0.96
PSEN1-212ENST00000555254 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
PSEN1-212ENST00000555254 A8MUN3 132 aa9.03□□□□□ -0.96
PSEN1-212ENST00000555254 DMAC1Q96GE9 116 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms